RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 CABP1Q9NZU7 370 aa9.45□□□□□ -0.9
CTHRC1-204ENST00000520880 SCHIP1Q9P0W5 487 aaPredicted RBP9.45□□□□□ -0.9
CTHRC1-204ENST00000520880 FGFR3P22607 806 aa9.44□□□□□ -0.9
CTHRC1-204ENST00000520880 NBPF1Q3BBV0 1214 aa9.44□□□□□ -0.9
CTHRC1-204ENST00000520880 PLEKHM2Q8IWE5 1019 aa9.44□□□□□ -0.9
CTHRC1-204ENST00000520880 FNBP4Q8N3X1 1017 aaPredicted RBP9.44□□□□□ -0.9
CTHRC1-204ENST00000520880 NEDD1Q8NHV4 660 aa9.44□□□□□ -0.9
CTHRC1-204ENST00000520880 KIAA1024Q9UPX6 916 aa9.44□□□□□ -0.9
CTHRC1-204ENST00000520880 PARP3Q9Y6F1 533 aa9.44□□□□□ -0.9
CTHRC1-204ENST00000520880 CNTNAP5Q8WYK1 1306 aa9.43□□□□□ -0.9
CTHRC1-204ENST00000520880 ZBTB7BO15156 539 aaPredicted RBP9.43□□□□□ -0.9
CTHRC1-204ENST00000520880 EPHA4P54764 986 aa9.43□□□□□ -0.9
CTHRC1-204ENST00000520880 CLDN10P78369 228 aa9.43□□□□□ -0.9
CTHRC1-204ENST00000520880 CTBSQ01459 385 aa9.43□□□□□ -0.9
CTHRC1-204ENST00000520880 ARSJQ5FYB0 599 aaPredicted RBP9.43□□□□□ -0.9
CTHRC1-204ENST00000520880 FIGNL1Q6PIW4 674 aa9.43□□□□□ -0.9
CTHRC1-204ENST00000520880 C1orf229Q6ZS94 237 aaPredicted RBP9.43□□□□□ -0.9
CTHRC1-204ENST00000520880 NLRP8Q86W28 1048 aa9.43□□□□□ -0.9
CTHRC1-204ENST00000520880 ZDHHC3Q9NYG2 299 aa9.43□□□□□ -0.9
CTHRC1-204ENST00000520880 A0A1W2PNR3 127 aa9.42□□□□□ -0.9
CTHRC1-204ENST00000520880 SHISA8B8ZZ34 492 aa9.42□□□□□ -0.9
CTHRC1-204ENST00000520880 ATP9BO43861 1147 aa9.42□□□□□ -0.9
CTHRC1-204ENST00000520880 FOXK2Q01167 660 aa9.42□□□□□ -0.9
CTHRC1-204ENST00000520880 KANK3Q6NY19 840 aa9.42□□□□□ -0.9
CTHRC1-204ENST00000520880 PROSER2Q86WR7 435 aaPredicted RBP9.42□□□□□ -0.9
CTHRC1-204ENST00000520880 TRIM50Q86XT4 487 aa9.42□□□□□ -0.9
CTHRC1-204ENST00000520880 TNS4Q8IZW8 715 aa9.42□□□□□ -0.9
CTHRC1-204ENST00000520880 TPCN2Q8NHX9 752 aa9.42□□□□□ -0.9
CTHRC1-204ENST00000520880 ZDHHC1Q8WTX9 485 aa9.42□□□□□ -0.9
CTHRC1-204ENST00000520880 HCN2Q9UL51 889 aa9.42□□□□□ -0.9
CTHRC1-204ENST00000520880 PCDHGC4Q9Y5F7 938 aa9.42□□□□□ -0.9
CTHRC1-204ENST00000520880 BMP4P12644 408 aa9.41□□□□□ -0.9
CTHRC1-204ENST00000520880 TXLNAP40222 546 aa9.41□□□□□ -0.9
CTHRC1-204ENST00000520880 TBCELQ5QJ74 424 aa9.41□□□□□ -0.9
CTHRC1-204ENST00000520880 ZIC5Q96T25 663 aa9.41□□□□□ -0.9
CTHRC1-204ENST00000520880 ATXN7O15265 892 aaPredicted RBP9.4□□□□□ -0.9
CTHRC1-204ENST00000520880 TATP17735 454 aaPredicted RBP9.4□□□□□ -0.9
CTHRC1-204ENST00000520880 CCDC102BQ68D86 513 aa9.4□□□□□ -0.9
CTHRC1-204ENST00000520880 GALNT6Q8NCL4 622 aa9.4□□□□□ -0.9
CTHRC1-204ENST00000520880 GLMNQ92990 594 aa9.4□□□□□ -0.9
CTHRC1-204ENST00000520880 DCDC2BA2VCK2 349 aa9.39□□□□□ -0.91
CTHRC1-204ENST00000520880 ATP1A2P50993 1020 aa9.39□□□□□ -0.91
CTHRC1-204ENST00000520880 SLC9A9Q8IVB4 645 aa9.39□□□□□ -0.91
CTHRC1-204ENST00000520880 L3MBTL2Q969R5 705 aa9.39□□□□□ -0.91
CTHRC1-204ENST00000520880 MKRN1Q9UHC7 482 aaKnown RBP9.39□□□□□ -0.91
CTHRC1-204ENST00000520880 GDF2Q9UK05 429 aaPredicted RBP9.39□□□□□ -0.91
CTHRC1-204ENST00000520880 MAPTP10636 758 aaKnown RBP9.38□□□□□ -0.91
CTHRC1-204ENST00000520880 NOS2P35228 1153 aa9.38□□□□□ -0.91
CTHRC1-204ENST00000520880 SNRPNP63162 240 aaKnown RBP9.38□□□□□ -0.91
CTHRC1-204ENST00000520880 TNP2Q05952 138 aa9.38□□□□□ -0.91
CTHRC1-204ENST00000520880 OGFOD1Q8N543 542 aa9.38□□□□□ -0.91
CTHRC1-204ENST00000520880 BEND7Q8N7W2 519 aaPredicted RBP9.38□□□□□ -0.91
CTHRC1-204ENST00000520880 GOLGA6L1Q8N7Z2 621 aa9.38□□□□□ -0.91
CTHRC1-204ENST00000520880 GGA1Q9UJY5 639 aa9.38□□□□□ -0.91
CTHRC1-204ENST00000520880 DNMT3AQ9Y6K1 912 aaPredicted RBP9.38□□□□□ -0.91
CTHRC1-204ENST00000520880 TEAD4Q15561 434 aa9.37□□□□□ -0.91
CTHRC1-204ENST00000520880 SH3PXD2AQ5TCZ1 1133 aa9.37□□□□□ -0.91
CTHRC1-204ENST00000520880 PODNQ7Z5L7 613 aa9.37□□□□□ -0.91
CTHRC1-204ENST00000520880 EDARADDQ8WWZ3 215 aa9.37□□□□□ -0.91
CTHRC1-204ENST00000520880 PHF20L1A8MW92 1017 aa9.36□□□□□ -0.91
CTHRC1-204ENST00000520880 KHNYNO15037 678 aaKnown RBP9.36□□□□□ -0.91
CTHRC1-204ENST00000520880 CD33P20138 364 aa9.36□□□□□ -0.91
CTHRC1-204ENST00000520880 BICDL1Q6ZP65 573 aa9.36□□□□□ -0.91
CTHRC1-204ENST00000520880 SLCO4C1Q6ZQN7 724 aa9.36□□□□□ -0.91
CTHRC1-204ENST00000520880 LARGE2Q8N3Y3 721 aa9.36□□□□□ -0.91
CTHRC1-204ENST00000520880 ZNF594Q96JF6 807 aaPredicted RBP9.36□□□□□ -0.91
CTHRC1-204ENST00000520880 TFIP11Q9UBB9 837 aaKnown RBP9.36□□□□□ -0.91
CTHRC1-204ENST00000520880 PALM3A6NDB9 673 aaPredicted RBP9.35□□□□□ -0.91
CTHRC1-204ENST00000520880 EML1O00423 815 aa9.35□□□□□ -0.91
CTHRC1-204ENST00000520880 DKK1O94907 266 aa9.35□□□□□ -0.91
CTHRC1-204ENST00000520880 C7orf43Q8WVR3 580 aa9.35□□□□□ -0.91
CTHRC1-204ENST00000520880 TSPAN10Q9H1Z9 355 aaPredicted RBP9.35□□□□□ -0.91
CTHRC1-204ENST00000520880 ZNF232Q9UNY5 417 aa9.35□□□□□ -0.91
CTHRC1-204ENST00000520880 GJA3Q9Y6H8 435 aa9.35□□□□□ -0.91
CTHRC1-204ENST00000520880 FAM157BP0CG42 384 aa9.34□□□□□ -0.91
CTHRC1-204ENST00000520880 ARAFP10398 606 aa9.34□□□□□ -0.91
CTHRC1-204ENST00000520880 SIX5Q8N196 739 aa9.34□□□□□ -0.91
CTHRC1-204ENST00000520880 TSEN2Q8NCE0 465 aaKnown RBP9.34□□□□□ -0.91
CTHRC1-204ENST00000520880 MAFBQ9Y5Q3 323 aaPredicted RBP9.34□□□□□ -0.91
CTHRC1-204ENST00000520880 SERTM1A2A2V5 107 aa9.33□□□□□ -0.92
CTHRC1-204ENST00000520880 A6NJR5 290 aa9.33□□□□□ -0.92
CTHRC1-204ENST00000520880 SFI1A8K8P3 1242 aa9.33□□□□□ -0.92
CTHRC1-204ENST00000520880 NEURL1BA8MQ27 555 aa9.33□□□□□ -0.92
CTHRC1-204ENST00000520880 EPXP11678 715 aa9.33□□□□□ -0.92
CTHRC1-204ENST00000520880 HOXB4P17483 251 aaPredicted RBP9.33□□□□□ -0.92
CTHRC1-204ENST00000520880 FAM182BQ5T319 152 aa9.33□□□□□ -0.92
CTHRC1-204ENST00000520880 SAMD5Q5TGI4 173 aa9.33□□□□□ -0.92
CTHRC1-204ENST00000520880 GPAT2Q6NUI2 795 aa9.33□□□□□ -0.92
CTHRC1-204ENST00000520880 DCAF5Q96JK2 942 aa9.33□□□□□ -0.92
CTHRC1-204ENST00000520880 STRN4Q9NRL3 753 aa9.33□□□□□ -0.92
CTHRC1-204ENST00000520880 KLF15Q9UIH9 416 aa9.33□□□□□ -0.92
CTHRC1-204ENST00000520880 M0R2N6 131 aa9.32□□□□□ -0.92
CTHRC1-204ENST00000520880 EFSO43281 561 aa9.32□□□□□ -0.92
CTHRC1-204ENST00000520880 LRRC69Q6ZNQ3 347 aa9.32□□□□□ -0.92
CTHRC1-204ENST00000520880 RRAGCQ9HB90 399 aa9.32□□□□□ -0.92
CTHRC1-204ENST00000520880 RASA1P20936 1047 aa9.31□□□□□ -0.92
CTHRC1-204ENST00000520880 PSMA6P60900 246 aaKnown RBP9.31□□□□□ -0.92
CTHRC1-204ENST00000520880 CALR3Q96L12 384 aaKnown RBP9.31□□□□□ -0.92
CTHRC1-204ENST00000520880 POTEAQ6S8J7 498 aa9.3□□□□□ -0.92
CTHRC1-204ENST00000520880 PPP1R12CQ9BZL4 782 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms