RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 RFC4P35249 363 aa17.61■□□□□ 0.41
VEGFA-219ENST00000518824 RIPK4P57078 832 aa17.61■□□□□ 0.41
VEGFA-219ENST00000518824 WDR43Q15061 677 aaKnown RBP eCLIP17.61■□□□□ 0.418e-10■□□□□ 9.2
VEGFA-219ENST00000518824 TAF7Q15545 349 aaPredicted RBP17.61■□□□□ 0.41
VEGFA-219ENST00000518824 FMNL2Q96PY5 1086 aa17.61■□□□□ 0.41
VEGFA-219ENST00000518824 USP16Q9Y5T5 823 aa17.61■□□□□ 0.41
VEGFA-219ENST00000518824 A1BGP04217 495 aa17.6■□□□□ 0.41
VEGFA-219ENST00000518824 CANXP27824 592 aaKnown RBP17.6■□□□□ 0.41
VEGFA-219ENST00000518824 PIP4K2AP48426 406 aaPredicted RBP17.6■□□□□ 0.41
VEGFA-219ENST00000518824 NEUROD2Q15784 382 aa17.6■□□□□ 0.41
VEGFA-219ENST00000518824 PNNQ9H307 717 aaKnown RBP17.6■□□□□ 0.41
VEGFA-219ENST00000518824 USP42Q9H9J4 1324 aaKnown RBP17.59■□□□□ 0.41
VEGFA-219ENST00000518824 MMP10P09238 476 aa17.59■□□□□ 0.41
VEGFA-219ENST00000518824 FKBP8Q14318 412 aa17.59■□□□□ 0.41
VEGFA-219ENST00000518824 COL15A1P39059 1388 aa17.58■□□□□ 0.4
VEGFA-219ENST00000518824 RUNDC1Q96C34 613 aa17.58■□□□□ 0.4
VEGFA-219ENST00000518824 SENP3-EIF4A1A0A087X0R7 540 aa17.57■□□□□ 0.4
VEGFA-219ENST00000518824 USPL1Q5W0Q7 1092 aa17.57■□□□□ 0.4
VEGFA-219ENST00000518824 BCL2L12Q9HB09 334 aa17.57■□□□□ 0.4
VEGFA-219ENST00000518824 TRIM35Q9UPQ4 493 aa17.57■□□□□ 0.4
VEGFA-219ENST00000518824 STARD3NLO95772 234 aa17.56■□□□□ 0.4
VEGFA-219ENST00000518824 EIF5P55010 431 aaKnown RBP17.56■□□□□ 0.4
VEGFA-219ENST00000518824 DDR1Q08345 913 aa17.55■□□□□ 0.4
VEGFA-219ENST00000518824 NLGN1Q8N2Q7 840 aa17.55■□□□□ 0.4
VEGFA-219ENST00000518824 EIF4A1P60842 406 aaKnown RBP17.54■□□□□ 0.4
VEGFA-219ENST00000518824 TEX13AQ9BXU3 409 aaPredicted RBP17.54■□□□□ 0.4
VEGFA-219ENST00000518824 WWC3Q9ULE0 1092 aa17.54■□□□□ 0.4
VEGFA-219ENST00000518824 ZNF330Q9Y3S2 320 aaPredicted RBP17.54■□□□□ 0.4
VEGFA-219ENST00000518824 KIAA1551Q9HCM1 1747 aa17.53■□□□□ 0.4
VEGFA-219ENST00000518824 NBPF26B4DH59 902 aa17.53■□□□□ 0.4
VEGFA-219ENST00000518824 ANP32CO43423 234 aa17.53■□□□□ 0.4
VEGFA-219ENST00000518824 SNRPA1P09661 255 aaKnown RBP17.53■□□□□ 0.4
VEGFA-219ENST00000518824 NBPF10Q6P3W6 841 aaKnown RBP17.53■□□□□ 0.4
VEGFA-219ENST00000518824 NBPF15Q8N660 670 aa17.53■□□□□ 0.4
VEGFA-219ENST00000518824 NARFQ9UHQ1 456 aa17.53■□□□□ 0.4
VEGFA-219ENST00000518824 APAF1O14727 1248 aa17.52■□□□□ 0.4
VEGFA-219ENST00000518824 TM4SF1P30408 202 aa17.52■□□□□ 0.4
VEGFA-219ENST00000518824 TBC1D2BQ9UPU7 963 aa17.52■□□□□ 0.4
VEGFA-219ENST00000518824 CD2APQ9Y5K6 639 aa17.52■□□□□ 0.4
VEGFA-219ENST00000518824 LAMB4A4D0S4 1761 aa17.52■□□□□ 0.4
VEGFA-219ENST00000518824 KIF13BQ9NQT8 1826 aa17.51■□□□□ 0.39
VEGFA-219ENST00000518824 N4BP2Q86UW6 1770 aaPredicted RBP17.51■□□□□ 0.39
VEGFA-219ENST00000518824 ZPR1O75312 459 aa17.51■□□□□ 0.39
VEGFA-219ENST00000518824 GIGYF1O75420 1035 aaPredicted RBP17.51■□□□□ 0.39
VEGFA-219ENST00000518824 YBX3P16989 372 aaKnown RBP eCLIP17.51■□□□□ 0.39
VEGFA-219ENST00000518824 NFIXQ14938 502 aa17.51■□□□□ 0.39
VEGFA-219ENST00000518824 PELP1Q8IZL8 1130 aaKnown RBP17.51■□□□□ 0.39
VEGFA-219ENST00000518824 TSPYL4Q9UJ04 414 aa17.51■□□□□ 0.39
VEGFA-219ENST00000518824 C10orf71Q711Q0 1435 aa17.5■□□□□ 0.39
VEGFA-219ENST00000518824 AFDNP55196 1824 aaKnown RBP17.5■□□□□ 0.39
VEGFA-219ENST00000518824 POLRMTO00411 1230 aaKnown RBP17.5■□□□□ 0.39
VEGFA-219ENST00000518824 IL6STP40189 918 aaPredicted RBP17.5■□□□□ 0.39
VEGFA-219ENST00000518824 KRT24Q2M2I5 525 aa17.5■□□□□ 0.39
VEGFA-219ENST00000518824 PNISRQ8TF01 805 aaKnown RBP17.5■□□□□ 0.39
VEGFA-219ENST00000518824 MRS2Q9HD23 443 aa17.5■□□□□ 0.39
VEGFA-219ENST00000518824 PARP3Q9Y6F1 533 aa17.5■□□□□ 0.39
VEGFA-219ENST00000518824 SCN7AQ01118 1682 aa17.5■□□□□ 0.39
VEGFA-219ENST00000518824 BCORQ6W2J9 1755 aa17.48■□□□□ 0.39
VEGFA-219ENST00000518824 CAMTA2O94983 1202 aa17.48■□□□□ 0.39
VEGFA-219ENST00000518824 LMOD3Q0VAK6 560 aa17.48■□□□□ 0.39
VEGFA-219ENST00000518824 GPR162Q16538 588 aa17.48■□□□□ 0.39
VEGFA-219ENST00000518824 TBC1D9BQ66K14 1250 aa17.48■□□□□ 0.39
VEGFA-219ENST00000518824 BICDL1Q6ZP65 573 aa17.48■□□□□ 0.39
VEGFA-219ENST00000518824 LAS1LQ9Y4W2 734 aaKnown RBP17.48■□□□□ 0.39
VEGFA-219ENST00000518824 PXDNLA1KZ92 1463 aa17.48■□□□□ 0.39
VEGFA-219ENST00000518824 A0A0G2JLW4 131 aa17.46■□□□□ 0.39
VEGFA-219ENST00000518824 CHL1O00533 1208 aa17.46■□□□□ 0.39
VEGFA-219ENST00000518824 DZIP3Q86Y13 1208 aaKnown RBP17.46■□□□□ 0.39
VEGFA-219ENST00000518824 NRXN2Q9P2S2 1712 aa17.46■□□□□ 0.39
VEGFA-219ENST00000518824 A0A087WZG4 1122 aa17.45■□□□□ 0.38
VEGFA-219ENST00000518824 DCAF8L1A6NGE4 600 aa17.45■□□□□ 0.38
VEGFA-219ENST00000518824 NGEFQ8N5V2 710 aa17.45■□□□□ 0.38
VEGFA-219ENST00000518824 CARMIL3Q8ND23 1372 aa17.44■□□□□ 0.38
VEGFA-219ENST00000518824 UTRNP46939 3433 aa17.44■□□□□ 0.38
VEGFA-219ENST00000518824 DPEP1P16444 411 aa17.44■□□□□ 0.38
VEGFA-219ENST00000518824 CCDC24Q8N4L8 307 aa17.44■□□□□ 0.38
VEGFA-219ENST00000518824 ANXA1P04083 346 aa17.43■□□□□ 0.38
VEGFA-219ENST00000518824 SERPINB2P05120 415 aa17.43■□□□□ 0.38
VEGFA-219ENST00000518824 MYL6BP14649 208 aa17.43■□□□□ 0.38
VEGFA-219ENST00000518824 EIF2S2P20042 333 aaKnown RBP17.43■□□□□ 0.38
VEGFA-219ENST00000518824 KCNA3P22001 575 aa17.43■□□□□ 0.38
VEGFA-219ENST00000518824 PROSER3Q2NL68 480 aa17.43■□□□□ 0.38
VEGFA-219ENST00000518824 NECTIN2Q92692 538 aa17.43■□□□□ 0.38
VEGFA-219ENST00000518824 BRCA1P38398 1863 aaKnown RBP17.43■□□□□ 0.38
VEGFA-219ENST00000518824 CHRNA5P30532 468 aa17.42■□□□□ 0.38
VEGFA-219ENST00000518824 PDIA6Q15084 440 aa17.42■□□□□ 0.38
VEGFA-219ENST00000518824 HLFQ16534 295 aa17.42■□□□□ 0.38
VEGFA-219ENST00000518824 TTLL7Q6ZT98 887 aa17.42■□□□□ 0.38
VEGFA-219ENST00000518824 BABAM1Q9NWV8 329 aa17.42■□□□□ 0.38
VEGFA-219ENST00000518824 CHD4Q14839 1912 aa17.41■□□□□ 0.38
VEGFA-219ENST00000518824 GOLGB1Q14789 3259 aaKnown RBP17.41■□□□□ 0.38
VEGFA-219ENST00000518824 ZNF853P0CG23 659 aa17.41■□□□□ 0.38
VEGFA-219ENST00000518824 YY1P25490 414 aa17.41■□□□□ 0.38
VEGFA-219ENST00000518824 TGFB2P61812 414 aa17.41■□□□□ 0.38
VEGFA-219ENST00000518824 LRP10Q7Z4F1 713 aa17.41■□□□□ 0.38
VEGFA-219ENST00000518824 MBIPQ9NS73 344 aa17.41■□□□□ 0.38
VEGFA-219ENST00000518824 ANKRD31Q8N7Z5 1873 aa17.41■□□□□ 0.38
VEGFA-219ENST00000518824 CFAP44Q96MT7 982 aa17.4■□□□□ 0.38
VEGFA-219ENST00000518824 NPM2Q86SE8 214 aaKnown RBP17.39■□□□□ 0.37
VEGFA-219ENST00000518824 NUP98P52948 1817 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms