RNA–Protein interactions for RNA: ENST00000517671.5

NPM1-204, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-204ENST00000517671 F12P00748 615 aaPredicted RBP11.86□□□□□ -0.51
NPM1-204ENST00000517671 TRIM32Q13049 653 aa11.86□□□□□ -0.51
NPM1-204ENST00000517671 PNMA1Q8ND90 353 aa11.86□□□□□ -0.51
NPM1-204ENST00000517671 LRP6O75581 1613 aa11.86□□□□□ -0.51
NPM1-204ENST00000517671 EMID1Q96A84 441 aaPredicted RBP11.86□□□□□ -0.51
NPM1-204ENST00000517671 C8orf37Q96NL8 207 aa11.86□□□□□ -0.51
NPM1-204ENST00000517671 TMEM131LA2VDJ0 1609 aa11.85□□□□□ -0.51
NPM1-204ENST00000517671 NUP155O75694 1391 aa11.85□□□□□ -0.51
NPM1-204ENST00000517671 APBB1O00213 710 aa11.85□□□□□ -0.51
NPM1-204ENST00000517671 ZNF326Q5BKZ1 582 aaKnown RBP11.85□□□□□ -0.51
NPM1-204ENST00000517671 ZNF697Q5TEC3 545 aa11.85□□□□□ -0.51
NPM1-204ENST00000517671 TRIM67Q6ZTA4 783 aa11.85□□□□□ -0.51
NPM1-204ENST00000517671 SHPRHQ149N8 1683 aa11.84□□□□□ -0.51
NPM1-204ENST00000517671 TRPC5Q9UL62 973 aaPredicted RBP11.84□□□□□ -0.51
NPM1-204ENST00000517671 ATAD2Q6PL18 1390 aa11.83□□□□□ -0.52
NPM1-204ENST00000517671 NR6A1Q15406 480 aa11.83□□□□□ -0.52
NPM1-204ENST00000517671 BAP1Q92560 729 aa11.83□□□□□ -0.52
NPM1-204ENST00000517671 WNT7BP56706 349 aa11.82□□□□□ -0.52
NPM1-204ENST00000517671 FNBP4Q8N3X1 1017 aaPredicted RBP11.82□□□□□ -0.52
NPM1-204ENST00000517671 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.81□□□□□ -0.52
NPM1-204ENST00000517671 MST1RQ04912 1400 aa11.81□□□□□ -0.52
NPM1-204ENST00000517671 SRCAPQ6ZRS2 3230 aa11.81□□□□□ -0.52
NPM1-204ENST00000517671 ASXL1Q8IXJ9 1541 aa11.81□□□□□ -0.52
NPM1-204ENST00000517671 PRM3Q9NNZ6 103 aa11.81□□□□□ -0.52
NPM1-204ENST00000517671 USP21Q9UK80 565 aa11.81□□□□□ -0.52
NPM1-204ENST00000517671 LINC01559Q495D7 138 aa11.8□□□□□ -0.52
NPM1-204ENST00000517671 PKDCCQ504Y2 493 aa11.8□□□□□ -0.52
NPM1-204ENST00000517671 NBPF14Q5TI25 921 aa11.8□□□□□ -0.52
NPM1-204ENST00000517671 HMX1Q9NP08 348 aaPredicted RBP11.8□□□□□ -0.52
NPM1-204ENST00000517671 PNPLA6Q8IY17 1366 aa11.8□□□□□ -0.52
NPM1-204ENST00000517671 PTPRUQ92729 1446 aa11.8□□□□□ -0.52
NPM1-204ENST00000517671 ADGRL3Q9HAR2 1447 aa11.8□□□□□ -0.52
NPM1-204ENST00000517671 FOXC1Q12948 553 aa11.79□□□□□ -0.52
NPM1-204ENST00000517671 ZNF511Q8NB15 262 aa11.79□□□□□ -0.52
NPM1-204ENST00000517671 SNRKQ9NRH2 765 aa11.79□□□□□ -0.52
NPM1-204ENST00000517671 SOS2Q07890 1332 aaPredicted RBP11.79□□□□□ -0.52
NPM1-204ENST00000517671 RPGRIP1LQ68CZ1 1315 aa11.79□□□□□ -0.52
NPM1-204ENST00000517671 PTCH1Q13635 1447 aa11.79□□□□□ -0.52
NPM1-204ENST00000517671 ADAMTS2O95450 1211 aa11.78□□□□□ -0.52
NPM1-204ENST00000517671 AGERQ15109 404 aa11.78□□□□□ -0.52
NPM1-204ENST00000517671 GCC2Q8IWJ2 1684 aa11.78□□□□□ -0.52
NPM1-204ENST00000517671 FKBPLQ9UIM3 349 aa11.78□□□□□ -0.52
NPM1-204ENST00000517671 SETBP1Q9Y6X0 1596 aa11.78□□□□□ -0.52
NPM1-204ENST00000517671 UNC13BO14795 1591 aa11.77□□□□□ -0.53
NPM1-204ENST00000517671 METP08581 1390 aa11.77□□□□□ -0.53
NPM1-204ENST00000517671 LRPPRCP42704 1394 aaKnown RBP11.77□□□□□ -0.53
NPM1-204ENST00000517671 NPHP3Q7Z494 1330 aa11.77□□□□□ -0.53
NPM1-204ENST00000517671 DGAT1O75907 488 aa11.77□□□□□ -0.53
NPM1-204ENST00000517671 SH3BP2P78314 561 aa11.77□□□□□ -0.53
NPM1-204ENST00000517671 MYT1Q01538 1121 aa11.77□□□□□ -0.53
NPM1-204ENST00000517671 GPKOWQ92917 476 aaPredicted RBP eCLIP11.77□□□□□ -0.533e-13■□□□□ 10
NPM1-204ENST00000517671 RGS12O14924 1447 aa11.76□□□□□ -0.53
NPM1-204ENST00000517671 PRR20EP86478 221 aa11.76□□□□□ -0.53
NPM1-204ENST00000517671 PRR20CP86479 221 aa11.76□□□□□ -0.53
NPM1-204ENST00000517671 PRR20DP86480 221 aa11.76□□□□□ -0.53
NPM1-204ENST00000517671 PRR20BP86481 221 aa11.76□□□□□ -0.53
NPM1-204ENST00000517671 PRR20AP86496 221 aa11.76□□□□□ -0.53
NPM1-204ENST00000517671 FLIIQ13045 1269 aa11.76□□□□□ -0.53
NPM1-204ENST00000517671 RC3H1Q5TC82 1133 aaKnown RBP11.76□□□□□ -0.53
NPM1-204ENST00000517671 SETD1AO15047 1707 aaKnown RBP11.76□□□□□ -0.53
NPM1-204ENST00000517671 SKOR1P84550 965 aa11.75□□□□□ -0.53
NPM1-204ENST00000517671 EHBP1Q8NDI1 1231 aa11.75□□□□□ -0.53
NPM1-204ENST00000517671 EPS8L1Q8TE68 723 aa11.75□□□□□ -0.53
NPM1-204ENST00000517671 C1orf167Q5SNV9 1468 aa11.74□□□□□ -0.53
NPM1-204ENST00000517671 ZC3H4Q9UPT8 1303 aaKnown RBP11.74□□□□□ -0.53
NPM1-204ENST00000517671 IQGAP3Q86VI3 1631 aa11.74□□□□□ -0.53
NPM1-204ENST00000517671 BPHLQ86WA6 291 aaPredicted RBP11.74□□□□□ -0.53
NPM1-204ENST00000517671 MTMR14Q8NCE2 650 aa11.74□□□□□ -0.53
NPM1-204ENST00000517671 HFM1A2PYH4 1435 aa11.74□□□□□ -0.53
NPM1-204ENST00000517671 WNT7AO00755 349 aa11.73□□□□□ -0.53
NPM1-204ENST00000517671 TRIM34Q9BYJ4 488 aa11.73□□□□□ -0.53
NPM1-204ENST00000517671 NDUFB9Q9Y6M9 179 aa11.73□□□□□ -0.53
NPM1-204ENST00000517671 PDXDC2PQ6P474 469 aa11.72□□□□□ -0.53
NPM1-204ENST00000517671 DDX17Q92841 729 aaKnown RBP11.72□□□□□ -0.53
NPM1-204ENST00000517671 GJD4Q96KN9 370 aaPredicted RBP11.72□□□□□ -0.53
NPM1-204ENST00000517671 PRAG1Q86YV5 1406 aa11.72□□□□□ -0.53
NPM1-204ENST00000517671 E9PCH4 1651 aa11.71□□□□□ -0.53
NPM1-204ENST00000517671 TNFRSF10AO00220 468 aa11.71□□□□□ -0.53
NPM1-204ENST00000517671 GDF9O60383 454 aa11.71□□□□□ -0.53
NPM1-204ENST00000517671 VARSP26640 1264 aaKnown RBP11.71□□□□□ -0.53
NPM1-204ENST00000517671 PTK2Q05397 1052 aa11.71□□□□□ -0.53
NPM1-204ENST00000517671 SF3B2Q13435 895 aaKnown RBP11.71□□□□□ -0.53
NPM1-204ENST00000517671 ESCO1Q5FWF5 840 aa11.71□□□□□ -0.53
NPM1-204ENST00000517671 ORAI2Q96SN7 254 aa11.71□□□□□ -0.53
NPM1-204ENST00000517671 NHSL1Q5SYE7 1610 aa11.71□□□□□ -0.53
NPM1-204ENST00000517671 XRN1Q8IZH2 1706 aaKnown RBP11.71□□□□□ -0.54
NPM1-204ENST00000517671 POTECB2RU33 542 aa11.7□□□□□ -0.54
NPM1-204ENST00000517671 MCM6Q14566 821 aa11.7□□□□□ -0.54
NPM1-204ENST00000517671 CYP4X1Q8N118 509 aa11.7□□□□□ -0.54
NPM1-204ENST00000517671 FOXJ1Q92949 421 aa11.7□□□□□ -0.54
NPM1-204ENST00000517671 MRGPRX2Q96LB1 330 aa11.7□□□□□ -0.54
NPM1-204ENST00000517671 PKD2L1Q9P0L9 805 aa11.7□□□□□ -0.54
NPM1-204ENST00000517671 ATRNO75882 1429 aa11.7□□□□□ -0.54
NPM1-204ENST00000517671 TTC24A2A3L6 582 aaPredicted RBP11.69□□□□□ -0.54
NPM1-204ENST00000517671 ITGAEP38570 1179 aa11.69□□□□□ -0.54
NPM1-204ENST00000517671 ARHGAP9Q9BRR9 750 aa11.69□□□□□ -0.54
NPM1-204ENST00000517671 MYO5BQ9ULV0 1848 aa11.68□□□□□ -0.54
NPM1-204ENST00000517671 MAGEB6P1A0A0J9YX57 407 aa11.68□□□□□ -0.54
NPM1-204ENST00000517671 FAM187AA6NFU0 413 aa11.68□□□□□ -0.54
NPM1-204ENST00000517671 ZBTB33Q86T24 672 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms