RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 DZIP3Q86Y13 1208 aaKnown RBP5.27□□□□□ -1.57
RNU4-60P-201ENST00000517239 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.27□□□□□ -1.57
RNU4-60P-201ENST00000517239 KHSRPQ92945 711 aaKnown RBP eCLIP5.27□□□□□ -1.57
RNU4-60P-201ENST00000517239 NBPF4Q96M43 638 aa5.27□□□□□ -1.57
RNU4-60P-201ENST00000517239 FAM129BQ96TA1 746 aa5.27□□□□□ -1.57
RNU4-60P-201ENST00000517239 SAP130Q9H0E3 1048 aa5.27□□□□□ -1.57
RNU4-60P-201ENST00000517239 SIRPGQ9P1W8 387 aa5.27□□□□□ -1.57
RNU4-60P-201ENST00000517239 PNMA2Q9UL42 364 aa5.27□□□□□ -1.57
RNU4-60P-201ENST00000517239 PPFIA4O75335 1185 aa5.26□□□□□ -1.57
RNU4-60P-201ENST00000517239 GIGYF1O75420 1035 aaPredicted RBP5.26□□□□□ -1.57
RNU4-60P-201ENST00000517239 IGHA2P01877 340 aa5.26□□□□□ -1.57
RNU4-60P-201ENST00000517239 GJA8P48165 433 aa5.26□□□□□ -1.57
RNU4-60P-201ENST00000517239 PTPN12Q05209 780 aaKnown RBP5.26□□□□□ -1.57
RNU4-60P-201ENST00000517239 USP4Q13107 963 aa5.26□□□□□ -1.57
RNU4-60P-201ENST00000517239 PROX2Q3B8N5 592 aa5.26□□□□□ -1.57
RNU4-60P-201ENST00000517239 PUS10Q3MIT2 529 aaKnown RBP5.26□□□□□ -1.57
RNU4-60P-201ENST00000517239 ODR4Q5SWX8 454 aa5.26□□□□□ -1.57
RNU4-60P-201ENST00000517239 CHRDL2Q6WN34 429 aa5.26□□□□□ -1.57
RNU4-60P-201ENST00000517239 CHMP7Q8WUX9 453 aaPredicted RBP5.26□□□□□ -1.57
RNU4-60P-201ENST00000517239 SCG3Q8WXD2 468 aaKnown RBP5.26□□□□□ -1.57
RNU4-60P-201ENST00000517239 GPRASP2Q96D09 838 aa5.26□□□□□ -1.57
RNU4-60P-201ENST00000517239 SGSM3Q96HU1 749 aa5.26□□□□□ -1.57
RNU4-60P-201ENST00000517239 FRMD6Q96NE9 622 aa5.26□□□□□ -1.57
RNU4-60P-201ENST00000517239 ARHGAP9Q9BRR9 750 aa5.26□□□□□ -1.57
RNU4-60P-201ENST00000517239 IER2Q9BTL4 223 aa5.26□□□□□ -1.57
RNU4-60P-201ENST00000517239 BCL2L12Q9HB09 334 aa5.26□□□□□ -1.57
RNU4-60P-201ENST00000517239 FANCLQ9NW38 375 aa5.26□□□□□ -1.57
RNU4-60P-201ENST00000517239 GEMIN8Q9NWZ8 242 aaKnown RBP5.26□□□□□ -1.57
RNU4-60P-201ENST00000517239 TCEAL9Q9UHQ7 104 aa5.26□□□□□ -1.57
RNU4-60P-201ENST00000517239 SLC27A5Q9Y2P5 690 aa5.26□□□□□ -1.57
RNU4-60P-201ENST00000517239 LAS1LQ9Y4W2 734 aaKnown RBP5.26□□□□□ -1.57
RNU4-60P-201ENST00000517239 V9GY48 417 aaPredicted RBP5.26□□□□□ -1.57
RNU4-60P-201ENST00000517239 M0R2N6 131 aa5.25□□□□□ -1.57
RNU4-60P-201ENST00000517239 FOXO3O43524 673 aa5.25□□□□□ -1.57
RNU4-60P-201ENST00000517239 CDC45O75419 566 aa5.25□□□□□ -1.57
RNU4-60P-201ENST00000517239 IGFBP4P22692 258 aa5.25□□□□□ -1.57
RNU4-60P-201ENST00000517239 GYS2P54840 703 aa5.25□□□□□ -1.57
RNU4-60P-201ENST00000517239 ZFYVE27Q5T4F4 411 aa5.25□□□□□ -1.57
RNU4-60P-201ENST00000517239 C16orf46Q6P387 395 aa5.25□□□□□ -1.57
RNU4-60P-201ENST00000517239 ANKS3Q6ZW76 656 aa5.25□□□□□ -1.57
RNU4-60P-201ENST00000517239 ARMC2Q8NEN0 867 aa5.25□□□□□ -1.57
RNU4-60P-201ENST00000517239 ALKBH8Q96BT7 664 aaKnown RBP5.25□□□□□ -1.57
RNU4-60P-201ENST00000517239 CEP89Q96ST8 783 aa5.25□□□□□ -1.57
RNU4-60P-201ENST00000517239 USB1Q9BQ65 265 aaKnown RBP5.25□□□□□ -1.57
RNU4-60P-201ENST00000517239 PLCD4Q9BRC7 762 aa5.25□□□□□ -1.57
RNU4-60P-201ENST00000517239 TRIM55Q9BYV6 548 aa5.25□□□□□ -1.57
RNU4-60P-201ENST00000517239 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.25□□□□□ -1.57
RNU4-60P-201ENST00000517239 KIAA1468Q9P260 1216 aa5.25□□□□□ -1.57
RNU4-60P-201ENST00000517239 TTF2Q9UNY4 1162 aaKnown RBP5.25□□□□□ -1.57
RNU4-60P-201ENST00000517239 COLQQ9Y215 455 aaPredicted RBP5.25□□□□□ -1.57
RNU4-60P-201ENST00000517239 CCDC85CA6NKD9 419 aa5.24□□□□□ -1.57
RNU4-60P-201ENST00000517239 ESPNB1AK53 854 aa5.24□□□□□ -1.57
RNU4-60P-201ENST00000517239 WDHD1O75717 1129 aaPredicted RBP5.24□□□□□ -1.57
RNU4-60P-201ENST00000517239 EIF4BP23588 611 aaKnown RBP5.24□□□□□ -1.57
RNU4-60P-201ENST00000517239 NFX1Q12986 1120 aaKnown RBP5.24□□□□□ -1.57
RNU4-60P-201ENST00000517239 ARSIQ5FYB1 569 aa5.24□□□□□ -1.57
RNU4-60P-201ENST00000517239 PPP4R3BQ5MIZ7 849 aa5.24□□□□□ -1.57
RNU4-60P-201ENST00000517239 MORN1Q5T089 497 aa5.24□□□□□ -1.57
RNU4-60P-201ENST00000517239 SH3TC2Q8TF17 1288 aa5.24□□□□□ -1.57
RNU4-60P-201ENST00000517239 CFHR5Q9BXR6 569 aa5.24□□□□□ -1.57
RNU4-60P-201ENST00000517239 ZNF408Q9H9D4 720 aa5.24□□□□□ -1.57
RNU4-60P-201ENST00000517239 KANSL2Q9H9L4 492 aa5.24□□□□□ -1.57
RNU4-60P-201ENST00000517239 STIM2Q9P246 746 aa5.24□□□□□ -1.57
RNU4-60P-201ENST00000517239 MRVI1Q9Y6F6 885 aa5.24□□□□□ -1.57
RNU4-60P-201ENST00000517239 ATAD2Q6PL18 1390 aa5.24□□□□□ -1.57
RNU4-60P-201ENST00000517239 FAM221BA6H8Z2 402 aa5.23□□□□□ -1.57
RNU4-60P-201ENST00000517239 ETFBP38117 255 aa5.23□□□□□ -1.57
RNU4-60P-201ENST00000517239 EVA1CP58658 441 aa5.23□□□□□ -1.57
RNU4-60P-201ENST00000517239 CBLBQ13191 982 aa5.23□□□□□ -1.57
RNU4-60P-201ENST00000517239 OS9Q13438 667 aaPredicted RBP5.23□□□□□ -1.57
RNU4-60P-201ENST00000517239 LONRF3Q496Y0 759 aa5.23□□□□□ -1.57
RNU4-60P-201ENST00000517239 MAP9Q49MG5 647 aa5.23□□□□□ -1.57
RNU4-60P-201ENST00000517239 ASTLQ6HA08 431 aaPredicted RBP5.23□□□□□ -1.57
RNU4-60P-201ENST00000517239 RNF19BQ6ZMZ0 732 aa5.23□□□□□ -1.57
RNU4-60P-201ENST00000517239 ATCAYQ86WG3 371 aa5.23□□□□□ -1.57
RNU4-60P-201ENST00000517239 WDR75Q8IWA0 830 aaKnown RBP5.23□□□□□ -1.57
RNU4-60P-201ENST00000517239 APPBP2Q92624 585 aa5.23□□□□□ -1.57
RNU4-60P-201ENST00000517239 GPKOWQ92917 476 aaPredicted RBP eCLIP5.23□□□□□ -1.57
RNU4-60P-201ENST00000517239 CSRNP1Q96S65 589 aa5.23□□□□□ -1.57
RNU4-60P-201ENST00000517239 TMX1Q9H3N1 280 aa5.23□□□□□ -1.57
RNU4-60P-201ENST00000517239 C12orf49Q9H741 205 aa5.23□□□□□ -1.57
RNU4-60P-201ENST00000517239 PRDM10Q9NQV6 1147 aa5.23□□□□□ -1.57
RNU4-60P-201ENST00000517239 TYW1Q9NV66 732 aaKnown RBP5.23□□□□□ -1.57
RNU4-60P-201ENST00000517239 SNTG2Q9NY99 539 aa5.23□□□□□ -1.57
RNU4-60P-201ENST00000517239 SPG7Q9UQ90 795 aa5.23□□□□□ -1.57
RNU4-60P-201ENST00000517239 PCDHB11Q9Y5F2 797 aa5.23□□□□□ -1.57
RNU4-60P-201ENST00000517239 EID1Q9Y6B2 187 aa5.23□□□□□ -1.57
RNU4-60P-201ENST00000517239 USP31Q70CQ4 1352 aa5.22□□□□□ -1.57
RNU4-60P-201ENST00000517239 ESYT3A0FGR9 886 aa5.22□□□□□ -1.57
RNU4-60P-201ENST00000517239 C19orf67A6NJJ6 358 aa5.22□□□□□ -1.57
RNU4-60P-201ENST00000517239 ZBTB39O15060 712 aa5.22□□□□□ -1.57
RNU4-60P-201ENST00000517239 RNF40O75150 1001 aa5.22□□□□□ -1.57
RNU4-60P-201ENST00000517239 MASP1P48740 699 aa5.22□□□□□ -1.57
RNU4-60P-201ENST00000517239 APLP1P51693 650 aa5.22□□□□□ -1.57
RNU4-60P-201ENST00000517239 FOXD4Q12950 439 aaPredicted RBP5.22□□□□□ -1.57
RNU4-60P-201ENST00000517239 PTPRNQ16849 979 aa5.22□□□□□ -1.57
RNU4-60P-201ENST00000517239 NBPF14Q5TI25 921 aa5.22□□□□□ -1.57
RNU4-60P-201ENST00000517239 BLOC1S3Q6QNY0 202 aa5.22□□□□□ -1.57
RNU4-60P-201ENST00000517239 C11orf96Q7Z7L8 435 aa5.22□□□□□ -1.57
RNU4-60P-201ENST00000517239 TNS4Q8IZW8 715 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms