RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 PIK3C2AO00443 1686 aa7.83□□□□□ -1.16
SCARNA6.1-201ENST00000516989 MYOM1P52179 1685 aa7.83□□□□□ -1.16
SCARNA6.1-201ENST00000516989 HOXC9P31274 260 aa7.82□□□□□ -1.16
SCARNA6.1-201ENST00000516989 VPS72Q15906 364 aa7.82□□□□□ -1.16
SCARNA6.1-201ENST00000516989 HSP90AB2PQ58FF8 381 aa7.82□□□□□ -1.16
SCARNA6.1-201ENST00000516989 ANKRD24Q8TF21 1146 aa7.82□□□□□ -1.16
SCARNA6.1-201ENST00000516989 NSD2O96028 1365 aa7.82□□□□□ -1.16
SCARNA6.1-201ENST00000516989 BCL9LQ86UU0 1499 aa7.81□□□□□ -1.16
SCARNA6.1-201ENST00000516989 A0A0G2JS52 829 aa7.81□□□□□ -1.16
SCARNA6.1-201ENST00000516989 SPDYE5A6NIY4 337 aa7.81□□□□□ -1.16
SCARNA6.1-201ENST00000516989 RFC5P40937 340 aa7.81□□□□□ -1.16
SCARNA6.1-201ENST00000516989 MTHFSP49914 203 aa7.81□□□□□ -1.16
SCARNA6.1-201ENST00000516989 MYT1Q01538 1121 aa7.81□□□□□ -1.16
SCARNA6.1-201ENST00000516989 BANK1Q8NDB2 785 aa7.81□□□□□ -1.16
SCARNA6.1-201ENST00000516989 SNRKQ9NRH2 765 aa7.81□□□□□ -1.16
SCARNA6.1-201ENST00000516989 NLRP2Q9NX02 1062 aa7.81□□□□□ -1.16
SCARNA6.1-201ENST00000516989 SLIT3O75094 1523 aa7.81□□□□□ -1.16
SCARNA6.1-201ENST00000516989 SLIT2O94813 1529 aa7.81□□□□□ -1.16
SCARNA6.1-201ENST00000516989 NRKQ7Z2Y5 1582 aa7.8□□□□□ -1.16
SCARNA6.1-201ENST00000516989 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.8□□□□□ -1.16
SCARNA6.1-201ENST00000516989 RCCD1A6NED2 376 aa7.8□□□□□ -1.16
SCARNA6.1-201ENST00000516989 FAM98CQ17RN3 349 aaKnown RBP7.8□□□□□ -1.16
SCARNA6.1-201ENST00000516989 DOK7Q18PE1 504 aa7.8□□□□□ -1.16
SCARNA6.1-201ENST00000516989 RIC3Q7Z5B4 369 aa7.8□□□□□ -1.16
SCARNA6.1-201ENST00000516989 TCP11L2Q8N4U5 519 aa7.8□□□□□ -1.16
SCARNA6.1-201ENST00000516989 SPIRE2Q8WWL2 714 aa7.8□□□□□ -1.16
SCARNA6.1-201ENST00000516989 FAM198AQ9UFP1 575 aa7.8□□□□□ -1.16
SCARNA6.1-201ENST00000516989 LIMD1Q9UGP4 676 aa7.8□□□□□ -1.16
SCARNA6.1-201ENST00000516989 NPC1L1Q9UHC9 1359 aa7.8□□□□□ -1.16
SCARNA6.1-201ENST00000516989 SPATA31A5Q5VU36 1347 aa7.79□□□□□ -1.16
SCARNA6.1-201ENST00000516989 SPATA31A7Q8IWB4 1347 aa7.79□□□□□ -1.16
SCARNA6.1-201ENST00000516989 WDR17Q8IZU2 1322 aa7.79□□□□□ -1.16
SCARNA6.1-201ENST00000516989 PPP2R1AP30153 589 aa7.79□□□□□ -1.16
SCARNA6.1-201ENST00000516989 RALBP1Q15311 655 aa7.79□□□□□ -1.16
SCARNA6.1-201ENST00000516989 TMEM259Q4ZIN3 620 aa7.79□□□□□ -1.16
SCARNA6.1-201ENST00000516989 EYA1Q99502 592 aa7.79□□□□□ -1.16
SCARNA6.1-201ENST00000516989 COG6Q9Y2V7 657 aa7.79□□□□□ -1.16
SCARNA6.1-201ENST00000516989 CAMTA1Q9Y6Y1 1673 aa7.79□□□□□ -1.16
SCARNA6.1-201ENST00000516989 SPATA31A1Q5TZJ5 1347 aa7.78□□□□□ -1.16
SCARNA6.1-201ENST00000516989 ATRNO75882 1429 aa7.78□□□□□ -1.16
SCARNA6.1-201ENST00000516989 NFAT5O94916 1531 aa7.78□□□□□ -1.16
SCARNA6.1-201ENST00000516989 PHRF1Q9P1Y6 1649 aaKnown RBP7.78□□□□□ -1.16
SCARNA6.1-201ENST00000516989 PDIA4P13667 645 aaKnown RBP7.78□□□□□ -1.16
SCARNA6.1-201ENST00000516989 HOXB3P14651 431 aaPredicted RBP7.78□□□□□ -1.16
SCARNA6.1-201ENST00000516989 COL9A1P20849 921 aa7.78□□□□□ -1.16
SCARNA6.1-201ENST00000516989 NBPF6Q5VWK0 638 aa7.78□□□□□ -1.16
SCARNA6.1-201ENST00000516989 PPP2R2DQ66LE6 453 aa7.78□□□□□ -1.16
SCARNA6.1-201ENST00000516989 GPR153Q6NV75 609 aa7.78□□□□□ -1.16
SCARNA6.1-201ENST00000516989 SEPT12Q8IYM1 358 aa7.78□□□□□ -1.16
SCARNA6.1-201ENST00000516989 NBPF4Q96M43 638 aa7.78□□□□□ -1.16
SCARNA6.1-201ENST00000516989 CARD10Q9BWT7 1032 aa7.78□□□□□ -1.16
SCARNA6.1-201ENST00000516989 FLT4P35916 1363 aa7.78□□□□□ -1.16
SCARNA6.1-201ENST00000516989 COL14A1Q05707 1796 aaKnown RBP7.78□□□□□ -1.16
SCARNA6.1-201ENST00000516989 ERBB3P21860 1342 aa7.78□□□□□ -1.16
SCARNA6.1-201ENST00000516989 COL5A2P05997 1499 aaPredicted RBP7.77□□□□□ -1.17
SCARNA6.1-201ENST00000516989 INSRP06213 1382 aa7.77□□□□□ -1.17
SCARNA6.1-201ENST00000516989 KIF24Q5T7B8 1368 aa7.77□□□□□ -1.17
SCARNA6.1-201ENST00000516989 RIMBP2O15034 1052 aa7.77□□□□□ -1.17
SCARNA6.1-201ENST00000516989 ANP32CO43423 234 aa7.77□□□□□ -1.17
SCARNA6.1-201ENST00000516989 CD46P15529 392 aa7.77□□□□□ -1.17
SCARNA6.1-201ENST00000516989 EIF4A2Q14240 407 aaKnown RBP7.77□□□□□ -1.17
SCARNA6.1-201ENST00000516989 USHBP1Q8N6Y0 703 aa7.77□□□□□ -1.17
SCARNA6.1-201ENST00000516989 CFAP53Q96M91 514 aa7.77□□□□□ -1.17
SCARNA6.1-201ENST00000516989 ZSWIM6Q9HCJ5 1215 aa7.77□□□□□ -1.17
SCARNA6.1-201ENST00000516989 SERPINA10Q9UK55 444 aa7.77□□□□□ -1.17
SCARNA6.1-201ENST00000516989 THRAP3Q9Y2W1 955 aaKnown RBP7.77□□□□□ -1.17
SCARNA6.1-201ENST00000516989 KIF20BQ96Q89 1820 aa7.77□□□□□ -1.17
SCARNA6.1-201ENST00000516989 ABCA3Q99758 1704 aa7.77□□□□□ -1.17
SCARNA6.1-201ENST00000516989 BLMP54132 1417 aaPredicted RBP7.77□□□□□ -1.17
SCARNA6.1-201ENST00000516989 RTL1A6NKG5 1358 aa7.76□□□□□ -1.17
SCARNA6.1-201ENST00000516989 MARF1Q9Y4F3 1742 aaKnown RBP7.76□□□□□ -1.17
SCARNA6.1-201ENST00000516989 CRYBG1Q9Y4K1 1723 aa7.76□□□□□ -1.17
SCARNA6.1-201ENST00000516989 EXOC5O00471 708 aa7.76□□□□□ -1.17
SCARNA6.1-201ENST00000516989 SPTLC1O15269 473 aa7.76□□□□□ -1.17
SCARNA6.1-201ENST00000516989 DIAPH1O60610 1272 aaKnown RBP7.76□□□□□ -1.17
SCARNA6.1-201ENST00000516989 PDE3BQ13370 1112 aa7.76□□□□□ -1.17
SCARNA6.1-201ENST00000516989 NUTM1Q86Y26 1132 aa7.76□□□□□ -1.17
SCARNA6.1-201ENST00000516989 SULF1Q8IWU6 871 aa7.76□□□□□ -1.17
SCARNA6.1-201ENST00000516989 CCDC97Q96F63 343 aaPredicted RBP7.76□□□□□ -1.17
SCARNA6.1-201ENST00000516989 PRKRIP1Q9H875 184 aaPredicted RBP7.76□□□□□ -1.17
SCARNA6.1-201ENST00000516989 LHX6Q9UPM6 363 aa7.76□□□□□ -1.17
SCARNA6.1-201ENST00000516989 CRB1P82279 1406 aa7.76□□□□□ -1.17
SCARNA6.1-201ENST00000516989 SMG6Q86US8 1419 aaKnown RBP7.76□□□□□ -1.17
SCARNA6.1-201ENST00000516989 DDX11L8A8MPP1 907 aa7.75□□□□□ -1.17
SCARNA6.1-201ENST00000516989 U2SURPO15042 1029 aaKnown RBP7.75□□□□□ -1.17
SCARNA6.1-201ENST00000516989 IL2RBP14784 551 aa7.75□□□□□ -1.17
SCARNA6.1-201ENST00000516989 IL13P35225 146 aa7.75□□□□□ -1.17
SCARNA6.1-201ENST00000516989 TUSC1Q2TAM9 212 aa7.75□□□□□ -1.17
SCARNA6.1-201ENST00000516989 PPP4R3BQ5MIZ7 849 aa7.75□□□□□ -1.17
SCARNA6.1-201ENST00000516989 NUDT18Q6ZVK8 323 aa7.75□□□□□ -1.17
SCARNA6.1-201ENST00000516989 RAPGEF4Q8WZA2 1011 aa7.75□□□□□ -1.17
SCARNA6.1-201ENST00000516989 CDCA7Q9BWT1 371 aaPredicted RBP7.75□□□□□ -1.17
SCARNA6.1-201ENST00000516989 TSKSQ9UJT2 592 aa7.75□□□□□ -1.17
SCARNA6.1-201ENST00000516989 NUDCQ9Y266 331 aa7.75□□□□□ -1.17
SCARNA6.1-201ENST00000516989 ZNF330Q9Y3S2 320 aaPredicted RBP7.75□□□□□ -1.17
SCARNA6.1-201ENST00000516989 USP54Q70EL1 1684 aa7.75□□□□□ -1.17
SCARNA6.1-201ENST00000516989 PARD3Q8TEW0 1356 aa7.74□□□□□ -1.17
SCARNA6.1-201ENST00000516989 SRCAPQ6ZRS2 3230 aa7.74□□□□□ -1.17
SCARNA6.1-201ENST00000516989 MAP2P11137 1827 aaKnown RBP7.74□□□□□ -1.17
SCARNA6.1-201ENST00000516989 MOXD2PA6NHM9 499 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms