RNA–Protein interactions for RNA: ENST00000516254.1

RNU6-1041P-201, Transcript of RNA, U6 small nuclear 1041, pseudogene, humanhuman

BASIC

Gene RNU6-1041P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1041P-201ENST00000516254 TMCO4Q5TGY1 634 aa3.42□□□□□ -1.86
RNU6-1041P-201ENST00000516254 Q6ZNB5 142 aa3.42□□□□□ -1.86
RNU6-1041P-201ENST00000516254 SND1Q7KZF4 910 aaKnown RBP eCLIP3.42□□□□□ -1.86
RNU6-1041P-201ENST00000516254 KIFC2Q96AC6 838 aa3.42□□□□□ -1.86
RNU6-1041P-201ENST00000516254 MYO19Q96H55 970 aa3.42□□□□□ -1.86
RNU6-1041P-201ENST00000516254 SENP2Q9HC62 589 aa3.42□□□□□ -1.86
RNU6-1041P-201ENST00000516254 POLMQ9NP87 494 aaPredicted RBP3.42□□□□□ -1.86
RNU6-1041P-201ENST00000516254 ZDHHC3Q9NYG2 299 aa3.42□□□□□ -1.86
RNU6-1041P-201ENST00000516254 PODXL2Q9NZ53 605 aa3.42□□□□□ -1.86
RNU6-1041P-201ENST00000516254 CABP1Q9NZU7 370 aa3.42□□□□□ -1.86
RNU6-1041P-201ENST00000516254 SLAIN2Q9P270 581 aa3.42□□□□□ -1.86
RNU6-1041P-201ENST00000516254 IQSEC3Q9UPP2 1182 aaPredicted RBP3.42□□□□□ -1.86
RNU6-1041P-201ENST00000516254 CARNS1A5YM72 827 aa3.41□□□□□ -1.86
RNU6-1041P-201ENST00000516254 TTLL8A6PVC2 850 aa3.41□□□□□ -1.86
RNU6-1041P-201ENST00000516254 FAM13AO94988 1023 aa3.41□□□□□ -1.86
RNU6-1041P-201ENST00000516254 TATP17735 454 aaPredicted RBP3.41□□□□□ -1.86
RNU6-1041P-201ENST00000516254 FKBP4Q02790 459 aaKnown RBP eCLIP3.41□□□□□ -1.86
RNU6-1041P-201ENST00000516254 RTN1Q16799 776 aa3.41□□□□□ -1.86
RNU6-1041P-201ENST00000516254 ALKBH2Q6NS38 261 aa3.41□□□□□ -1.86
RNU6-1041P-201ENST00000516254 C16orf46Q6P387 395 aa3.41□□□□□ -1.86
RNU6-1041P-201ENST00000516254 LYSMD3Q7Z3D4 306 aa3.41□□□□□ -1.86
RNU6-1041P-201ENST00000516254 ABTB2Q8N961 1025 aa3.41□□□□□ -1.86
RNU6-1041P-201ENST00000516254 HELQQ8TDG4 1101 aa3.41□□□□□ -1.86
RNU6-1041P-201ENST00000516254 CHMP7Q8WUX9 453 aaPredicted RBP3.41□□□□□ -1.86
RNU6-1041P-201ENST00000516254 L3MBTL2Q969R5 705 aa3.41□□□□□ -1.86
RNU6-1041P-201ENST00000516254 INSM2Q96T92 566 aaPredicted RBP3.41□□□□□ -1.86
RNU6-1041P-201ENST00000516254 ANKIB1Q9P2G1 1089 aa3.41□□□□□ -1.86
RNU6-1041P-201ENST00000516254 ZNF232Q9UNY5 417 aa3.41□□□□□ -1.86
RNU6-1041P-201ENST00000516254 A0A1B0GTH6 734 aa3.4□□□□□ -1.87
RNU6-1041P-201ENST00000516254 SOWAHDA6NJG2 315 aa3.4□□□□□ -1.87
RNU6-1041P-201ENST00000516254 EML1O00423 815 aa3.4□□□□□ -1.87
RNU6-1041P-201ENST00000516254 ICMTO60725 284 aa3.4□□□□□ -1.87
RNU6-1041P-201ENST00000516254 STAU1O95793 577 aaKnown RBP3.4□□□□□ -1.87
RNU6-1041P-201ENST00000516254 NPR3P17342 541 aa3.4□□□□□ -1.87
RNU6-1041P-201ENST00000516254 BRD2P25440 801 aaKnown RBP3.4□□□□□ -1.87
RNU6-1041P-201ENST00000516254 LBRQ14739 615 aaKnown RBP3.4□□□□□ -1.87
RNU6-1041P-201ENST00000516254 CCDC27Q2M243 656 aa3.4□□□□□ -1.87
RNU6-1041P-201ENST00000516254 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.4□□□□□ -1.87
RNU6-1041P-201ENST00000516254 C6orf118Q5T5N4 469 aa3.4□□□□□ -1.87
RNU6-1041P-201ENST00000516254 GTF3C2Q8WUA4 911 aaPredicted RBP3.4□□□□□ -1.87
RNU6-1041P-201ENST00000516254 FAM13BQ9NYF5 915 aa3.4□□□□□ -1.87
RNU6-1041P-201ENST00000516254 STIM2Q9P246 746 aa3.4□□□□□ -1.87
RNU6-1041P-201ENST00000516254 SOS2Q07890 1332 aaPredicted RBP3.4□□□□□ -1.87
RNU6-1041P-201ENST00000516254 ABL1P00519 1130 aa3.39□□□□□ -1.87
RNU6-1041P-201ENST00000516254 RPLP1P05386 114 aaKnown RBP3.39□□□□□ -1.87
RNU6-1041P-201ENST00000516254 CTSOP43234 321 aaPredicted RBP3.39□□□□□ -1.87
RNU6-1041P-201ENST00000516254 C11orf91Q3C1V1 193 aa3.39□□□□□ -1.87
RNU6-1041P-201ENST00000516254 C4orf17Q53FE4 359 aa3.39□□□□□ -1.87
RNU6-1041P-201ENST00000516254 FOXD4L5Q5VV16 416 aaPredicted RBP3.39□□□□□ -1.87
RNU6-1041P-201ENST00000516254 NBPF10Q6P3W6 841 aaKnown RBP3.39□□□□□ -1.87
RNU6-1041P-201ENST00000516254 GLYCTKQ8IVS8 523 aa3.39□□□□□ -1.87
RNU6-1041P-201ENST00000516254 ALDH16A1Q8IZ83 802 aa3.39□□□□□ -1.87
RNU6-1041P-201ENST00000516254 ZNF295-AS1Q8N0V1 137 aa3.39□□□□□ -1.87
RNU6-1041P-201ENST00000516254 RNF217Q8TC41 542 aa3.39□□□□□ -1.87
RNU6-1041P-201ENST00000516254 GMCL1Q96IK5 515 aa3.39□□□□□ -1.87
RNU6-1041P-201ENST00000516254 PURBQ96QR8 312 aaKnown RBP3.39□□□□□ -1.87
RNU6-1041P-201ENST00000516254 CITED4Q96RK1 184 aa3.39□□□□□ -1.87
RNU6-1041P-201ENST00000516254 MKNK1Q9BUB5 465 aa3.39□□□□□ -1.87
RNU6-1041P-201ENST00000516254 NEUROD4Q9HD90 331 aa3.39□□□□□ -1.87
RNU6-1041P-201ENST00000516254 C11orf16Q9NQ32 467 aa3.39□□□□□ -1.87
RNU6-1041P-201ENST00000516254 AAASQ9NRG9 546 aa3.39□□□□□ -1.87
RNU6-1041P-201ENST00000516254 DYRK1BQ9Y463 629 aa3.39□□□□□ -1.87
RNU6-1041P-201ENST00000516254 MAN1A2O60476 641 aa3.38□□□□□ -1.87
RNU6-1041P-201ENST00000516254 F11P03951 625 aa3.38□□□□□ -1.87
RNU6-1041P-201ENST00000516254 PCSK2P16519 638 aa3.38□□□□□ -1.87
RNU6-1041P-201ENST00000516254 USP5P45974 858 aa3.38□□□□□ -1.87
RNU6-1041P-201ENST00000516254 PLA2G4AP47712 749 aa3.38□□□□□ -1.87
RNU6-1041P-201ENST00000516254 SERPINB4P48594 390 aa3.38□□□□□ -1.87
RNU6-1041P-201ENST00000516254 POU4F2Q12837 409 aa3.38□□□□□ -1.87
RNU6-1041P-201ENST00000516254 COX20Q5RI15 118 aa3.38□□□□□ -1.87
RNU6-1041P-201ENST00000516254 IER5Q5VY09 327 aa3.38□□□□□ -1.87
RNU6-1041P-201ENST00000516254 PRICKLE2Q7Z3G6 844 aa3.38□□□□□ -1.87
RNU6-1041P-201ENST00000516254 TRIM46Q7Z4K8 759 aa3.38□□□□□ -1.87
RNU6-1041P-201ENST00000516254 ZDHHC1Q8WTX9 485 aa3.38□□□□□ -1.87
RNU6-1041P-201ENST00000516254 AIDAQ96BJ3 306 aa3.38□□□□□ -1.87
RNU6-1041P-201ENST00000516254 ZFP42Q96MM3 310 aa3.38□□□□□ -1.87
RNU6-1041P-201ENST00000516254 PHACTR1Q9C0D0 580 aa3.38□□□□□ -1.87
RNU6-1041P-201ENST00000516254 TIMMDC1Q9NPL8 285 aa3.38□□□□□ -1.87
RNU6-1041P-201ENST00000516254 ATP13A2Q9NQ11 1180 aa3.38□□□□□ -1.87
RNU6-1041P-201ENST00000516254 BIN2Q9UBW5 565 aaPredicted RBP3.38□□□□□ -1.87
RNU6-1041P-201ENST00000516254 SEPT3Q9UH03 358 aa3.38□□□□□ -1.87
RNU6-1041P-201ENST00000516254 H3BRB1 525 aa3.37□□□□□ -1.87
RNU6-1041P-201ENST00000516254 H7C1W4 665 aa3.37□□□□□ -1.87
RNU6-1041P-201ENST00000516254 NDUFB5O43674 189 aa3.37□□□□□ -1.87
RNU6-1041P-201ENST00000516254 LGR5O75473 907 aa3.37□□□□□ -1.87
RNU6-1041P-201ENST00000516254 MFAP1P55081 439 aaKnown RBP3.37□□□□□ -1.87
RNU6-1041P-201ENST00000516254 MARSP56192 900 aaKnown RBP3.37□□□□□ -1.87
RNU6-1041P-201ENST00000516254 FGD1P98174 961 aa3.37□□□□□ -1.87
RNU6-1041P-201ENST00000516254 PDE3BQ13370 1112 aa3.37□□□□□ -1.87
RNU6-1041P-201ENST00000516254 NAA30Q147X3 362 aaPredicted RBP3.37□□□□□ -1.87
RNU6-1041P-201ENST00000516254 NOM1Q5C9Z4 860 aaKnown RBP3.37□□□□□ -1.87
RNU6-1041P-201ENST00000516254 EFHC2Q5JST6 749 aa3.37□□□□□ -1.87
RNU6-1041P-201ENST00000516254 TBCELQ5QJ74 424 aa3.37□□□□□ -1.87
RNU6-1041P-201ENST00000516254 FIGNL1Q6PIW4 674 aa3.37□□□□□ -1.87
RNU6-1041P-201ENST00000516254 NLRP8Q86W28 1048 aa3.37□□□□□ -1.87
RNU6-1041P-201ENST00000516254 ZSCAN29Q8IWY8 852 aaPredicted RBP3.37□□□□□ -1.87
RNU6-1041P-201ENST00000516254 PGBD3Q8N328 593 aa3.37□□□□□ -1.87
RNU6-1041P-201ENST00000516254 RHPN1Q8TCX5 695 aa3.37□□□□□ -1.87
RNU6-1041P-201ENST00000516254 IFT43Q96FT9 208 aa3.37□□□□□ -1.87
RNU6-1041P-201ENST00000516254 BCL11AQ9H165 835 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms