RNA–Protein interactions for RNA: ENST00000515748.2

CSNK1A1-206, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-206ENST00000515748 FBLN1P23142 703 aa12.74□□□□□ -0.37
CSNK1A1-206ENST00000515748 DDR1Q08345 913 aa12.74□□□□□ -0.37
CSNK1A1-206ENST00000515748 ERFEQ4G0M1 354 aa12.74□□□□□ -0.37
CSNK1A1-206ENST00000515748 RC3H1Q5TC82 1133 aaKnown RBP12.74□□□□□ -0.37
CSNK1A1-206ENST00000515748 TSKSQ9UJT2 592 aa12.74□□□□□ -0.37
CSNK1A1-206ENST00000515748 INSRP06213 1382 aa12.73□□□□□ -0.37
CSNK1A1-206ENST00000515748 FKBP8Q14318 412 aa12.73□□□□□ -0.37
CSNK1A1-206ENST00000515748 TTLL6Q8N841 843 aa12.73□□□□□ -0.37
CSNK1A1-206ENST00000515748 DGKZQ13574 1117 aa12.72□□□□□ -0.37
CSNK1A1-206ENST00000515748 RRS1Q15050 365 aaKnown RBP12.72□□□□□ -0.37
CSNK1A1-206ENST00000515748 NKX1-1Q15270 411 aaPredicted RBP12.72□□□□□ -0.37
CSNK1A1-206ENST00000515748 ATG3Q9NT62 314 aa12.72□□□□□ -0.37
CSNK1A1-206ENST00000515748 ABT1Q9ULW3 272 aaKnown RBP12.72□□□□□ -0.37
CSNK1A1-206ENST00000515748 FAM208AQ9UK61 1670 aaKnown RBP12.72□□□□□ -0.37
CSNK1A1-206ENST00000515748 MORC1Q86VD1 984 aa12.71□□□□□ -0.37
CSNK1A1-206ENST00000515748 GPR101Q96P66 508 aaPredicted RBP12.71□□□□□ -0.37
CSNK1A1-206ENST00000515748 TAF1DQ9H5J8 278 aaPredicted RBP12.71□□□□□ -0.37
CSNK1A1-206ENST00000515748 TMOD3Q9NYL9 352 aa12.71□□□□□ -0.37
CSNK1A1-206ENST00000515748 POLKQ9UBT6 870 aa12.71□□□□□ -0.37
CSNK1A1-206ENST00000515748 MAP2P11137 1827 aaKnown RBP12.71□□□□□ -0.38
CSNK1A1-206ENST00000515748 IQCA1LA6NCM1 817 aa12.7□□□□□ -0.38
CSNK1A1-206ENST00000515748 POLRMTO00411 1230 aaKnown RBP12.7□□□□□ -0.38
CSNK1A1-206ENST00000515748 TM4SF1P30408 202 aa12.7□□□□□ -0.38
CSNK1A1-206ENST00000515748 SLC4A9Q96Q91 983 aa12.7□□□□□ -0.38
CSNK1A1-206ENST00000515748 ZNF219Q9P2Y4 722 aaPredicted RBP12.7□□□□□ -0.38
CSNK1A1-206ENST00000515748 SRP68Q9UHB9 627 aaKnown RBP12.7□□□□□ -0.38
CSNK1A1-206ENST00000515748 CLEC11AQ9Y240 323 aa12.7□□□□□ -0.38
CSNK1A1-206ENST00000515748 EMILIN1Q9Y6C2 1016 aa12.7□□□□□ -0.38
CSNK1A1-206ENST00000515748 NCAPD2Q15021 1401 aa12.7□□□□□ -0.38
CSNK1A1-206ENST00000515748 SOX10P56693 466 aa12.69□□□□□ -0.38
CSNK1A1-206ENST00000515748 CNTROBQ8N137 903 aa12.69□□□□□ -0.38
CSNK1A1-206ENST00000515748 CAPNS2Q96L46 248 aa12.69□□□□□ -0.38
CSNK1A1-206ENST00000515748 ECE1P42892 770 aa12.68□□□□□ -0.38
CSNK1A1-206ENST00000515748 EAPPQ56P03 285 aaPredicted RBP12.68□□□□□ -0.38
CSNK1A1-206ENST00000515748 RBM42Q9BTD8 480 aaKnown RBP12.68□□□□□ -0.38
CSNK1A1-206ENST00000515748 RGPD2P0DJD1 1756 aa12.67□□□□□ -0.38
CSNK1A1-206ENST00000515748 GRM1Q13255 1194 aa12.67□□□□□ -0.38
CSNK1A1-206ENST00000515748 HSP90AB2PQ58FF8 381 aa12.67□□□□□ -0.38
CSNK1A1-206ENST00000515748 ITGB4P16144 1822 aa12.67□□□□□ -0.38
CSNK1A1-206ENST00000515748 CNTNAP4Q9C0A0 1308 aa12.66□□□□□ -0.38
CSNK1A1-206ENST00000515748 CC2D1BQ5T0F9 858 aaKnown RBP12.66□□□□□ -0.38
CSNK1A1-206ENST00000515748 MAP1SQ66K74 1059 aaPredicted RBP12.66□□□□□ -0.38
CSNK1A1-206ENST00000515748 CYP4F22Q6NT55 531 aa12.66□□□□□ -0.38
CSNK1A1-206ENST00000515748 PAXIP1Q6ZW49 1069 aaPredicted RBP12.66□□□□□ -0.38
CSNK1A1-206ENST00000515748 GCC1Q96CN9 775 aa12.66□□□□□ -0.38
CSNK1A1-206ENST00000515748 L3MBTL3Q96JM7 780 aaPredicted RBP12.66□□□□□ -0.38
CSNK1A1-206ENST00000515748 CCDC88AQ3V6T2 1871 aa12.65□□□□□ -0.38
CSNK1A1-206ENST00000515748 USP42Q9H9J4 1324 aaKnown RBP12.65□□□□□ -0.38
CSNK1A1-206ENST00000515748 CA12O43570 354 aa12.65□□□□□ -0.38
CSNK1A1-206ENST00000515748 MAP2K2P36507 400 aa12.65□□□□□ -0.38
CSNK1A1-206ENST00000515748 TNNT2P45379 298 aaPredicted RBP12.65□□□□□ -0.38
CSNK1A1-206ENST00000515748 C2CD5Q86YS7 1000 aa12.65□□□□□ -0.38
CSNK1A1-206ENST00000515748 ZNF316A6NFI3 1004 aaPredicted RBP12.64□□□□□ -0.39
CSNK1A1-206ENST00000515748 H0YIN7 160 aa12.64□□□□□ -0.39
CSNK1A1-206ENST00000515748 C21orf2O43822 256 aa12.64□□□□□ -0.39
CSNK1A1-206ENST00000515748 AOC2O75106 756 aa12.64□□□□□ -0.39
CSNK1A1-206ENST00000515748 DDX21Q9NR30 783 aaKnown RBP eCLIP12.64□□□□□ -0.39
CSNK1A1-206ENST00000515748 SPG7Q9UQ90 795 aa12.64□□□□□ -0.39
CSNK1A1-206ENST00000515748 TIAM2Q8IVF5 1701 aa12.63□□□□□ -0.39
CSNK1A1-206ENST00000515748 HABP4Q5JVS0 413 aaKnown RBP12.63□□□□□ -0.39
CSNK1A1-206ENST00000515748 HACL1Q9UJ83 578 aa12.63□□□□□ -0.39
CSNK1A1-206ENST00000515748 CASP8AP2Q9UKL3 1982 aa12.63□□□□□ -0.39
CSNK1A1-206ENST00000515748 COL3A1P02461 1466 aaPredicted RBP12.62□□□□□ -0.39
CSNK1A1-206ENST00000515748 PPM1GO15355 546 aaPredicted RBP12.62□□□□□ -0.39
CSNK1A1-206ENST00000515748 EPHX2P34913 555 aa12.62□□□□□ -0.39
CSNK1A1-206ENST00000515748 DDX10Q13206 875 aaKnown RBP12.62□□□□□ -0.39
CSNK1A1-206ENST00000515748 EIF4A2Q14240 407 aaKnown RBP12.62□□□□□ -0.39
CSNK1A1-206ENST00000515748 PNMA8AQ86V59 439 aaPredicted RBP12.62□□□□□ -0.39
CSNK1A1-206ENST00000515748 KDRP35968 1356 aa12.61□□□□□ -0.39
CSNK1A1-206ENST00000515748 LTBP3Q9NS15 1303 aa12.61□□□□□ -0.39
CSNK1A1-206ENST00000515748 ZPR1O75312 459 aa12.6□□□□□ -0.39
CSNK1A1-206ENST00000515748 SERPINB2P05120 415 aa12.6□□□□□ -0.39
CSNK1A1-206ENST00000515748 CRKLP46109 303 aaKnown RBP12.6□□□□□ -0.39
CSNK1A1-206ENST00000515748 MTHFSP49914 203 aa12.6□□□□□ -0.39
CSNK1A1-206ENST00000515748 FMR1Q06787 632 aaKnown RBP eCLIP12.6□□□□□ -0.39
CSNK1A1-206ENST00000515748 NFIXQ14938 502 aa12.6□□□□□ -0.39
CSNK1A1-206ENST00000515748 RALBP1Q15311 655 aa12.6□□□□□ -0.39
CSNK1A1-206ENST00000515748 USPL1Q5W0Q7 1092 aa12.6□□□□□ -0.39
CSNK1A1-206ENST00000515748 ZNF622Q969S3 477 aaKnown RBP eCLIP12.6□□□□□ -0.39
CSNK1A1-206ENST00000515748 TAOK3Q9H2K8 898 aa12.6□□□□□ -0.39
CSNK1A1-206ENST00000515748 DLL1O00548 723 aa12.59□□□□□ -0.39
CSNK1A1-206ENST00000515748 PPP2R1AP30153 589 aa12.59□□□□□ -0.39
CSNK1A1-206ENST00000515748 IL13P35225 146 aa12.59□□□□□ -0.39
CSNK1A1-206ENST00000515748 CST9Q5W186 159 aa12.59□□□□□ -0.39
CSNK1A1-206ENST00000515748 IFNL2Q8IZJ0 200 aa12.59□□□□□ -0.39
CSNK1A1-206ENST00000515748 NBPF15Q8N660 670 aa12.59□□□□□ -0.39
CSNK1A1-206ENST00000515748 EYA1Q99502 592 aa12.59□□□□□ -0.39
CSNK1A1-206ENST00000515748 PHKG2P15735 406 aa12.58□□□□□ -0.4
CSNK1A1-206ENST00000515748 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.58□□□□□ -0.4
CSNK1A1-206ENST00000515748 TLL2Q9Y6L7 1015 aa12.58□□□□□ -0.4
CSNK1A1-206ENST00000515748 BRPF1P55201 1214 aaPredicted RBP12.57□□□□□ -0.4
CSNK1A1-206ENST00000515748 SCN4AP35499 1836 aa12.56□□□□□ -0.4
CSNK1A1-206ENST00000515748 ERVV-2B6SEH9 535 aa12.56□□□□□ -0.4
CSNK1A1-206ENST00000515748 PTCD1O75127 700 aaKnown RBP12.56□□□□□ -0.4
CSNK1A1-206ENST00000515748 INTS5Q6P9B9 1019 aaKnown RBP12.56□□□□□ -0.4
CSNK1A1-206ENST00000515748 DICER1Q9UPY3 1922 aaKnown RBP12.56□□□□□ -0.4
CSNK1A1-206ENST00000515748 MYH14Q7Z406 1995 aaKnown RBP12.56□□□□□ -0.4
CSNK1A1-206ENST00000515748 DIAPH1O60610 1272 aaKnown RBP12.55□□□□□ -0.4
CSNK1A1-206ENST00000515748 CIAPIN1Q6FI81 312 aa12.55□□□□□ -0.4
CSNK1A1-206ENST00000515748 CFAP53Q96M91 514 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms