RNA–Protein interactions for RNA: ENST00000514738.5

CDH6-205, Transcript of cadherin 6, humanhuman

TSL 1 (best) BASIC

Gene CDH6, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-205ENST00000514738 ATL2Q8NHH9 583 aa19.09■□□□□ 0.65
CDH6-205ENST00000514738 ZDHHC9Q9Y397 364 aa19.09■□□□□ 0.65
CDH6-205ENST00000514738 ERLIN2O94905 339 aa19.08■□□□□ 0.65
CDH6-205ENST00000514738 ZNF396Q96N95 335 aaPredicted RBP19.08■□□□□ 0.65
CDH6-205ENST00000514738 RTN2O75298 545 aa19.08■□□□□ 0.64
CDH6-205ENST00000514738 LRMPQ12912 555 aa19.08■□□□□ 0.64
CDH6-205ENST00000514738 PHF8Q9UPP1 1060 aa19.08■□□□□ 0.64
CDH6-205ENST00000514738 NF2P35240 595 aa19.07■□□□□ 0.64
CDH6-205ENST00000514738 SLFN5Q08AF3 891 aa19.07■□□□□ 0.64
CDH6-205ENST00000514738 AMOTQ4VCS5 1084 aa19.07■□□□□ 0.64
CDH6-205ENST00000514738 TRAK1Q9UPV9 953 aa19.07■□□□□ 0.64
CDH6-205ENST00000514738 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.07■□□□□ 0.64
CDH6-205ENST00000514738 RAD54L2Q9Y4B4 1467 aa19.07■□□□□ 0.64
CDH6-205ENST00000514738 PTPN23Q9H3S7 1636 aa19.07■□□□□ 0.64
CDH6-205ENST00000514738 PAX3P23760 479 aa19.07■□□□□ 0.64
CDH6-205ENST00000514738 CHMLP26374 656 aa19.07■□□□□ 0.64
CDH6-205ENST00000514738 SNX1Q13596 522 aa19.07■□□□□ 0.64
CDH6-205ENST00000514738 IL16Q14005 1332 aa19.06■□□□□ 0.64
CDH6-205ENST00000514738 SLC4A1APQ9BWU0 796 aaKnown RBP19.06■□□□□ 0.64
CDH6-205ENST00000514738 PARD3Q8TEW0 1356 aa19.06■□□□□ 0.64
CDH6-205ENST00000514738 ZNF521Q96K83 1311 aa19.06■□□□□ 0.64
CDH6-205ENST00000514738 GPTP24298 496 aa19.06■□□□□ 0.64
CDH6-205ENST00000514738 MYBPC2Q14324 1141 aa19.06■□□□□ 0.64
CDH6-205ENST00000514738 OATP04181 439 aa19.05■□□□□ 0.64
CDH6-205ENST00000514738 ARHGAP29Q52LW3 1261 aa19.05■□□□□ 0.64
CDH6-205ENST00000514738 TRMT2AQ8IZ69 625 aaKnown RBP19.05■□□□□ 0.64
CDH6-205ENST00000514738 BIN2Q9UBW5 565 aaPredicted RBP19.05■□□□□ 0.64
CDH6-205ENST00000514738 TBC1D2BQ9UPU7 963 aa19.05■□□□□ 0.64
CDH6-205ENST00000514738 NCAPG2Q86XI2 1143 aa19.05■□□□□ 0.64
CDH6-205ENST00000514738 NUTM1Q86Y26 1132 aa19.05■□□□□ 0.64
CDH6-205ENST00000514738 ANKRD18AQ8IVF6 992 aa19.05■□□□□ 0.64
CDH6-205ENST00000514738 CRACR2AQ9BSW2 395 aa19.05■□□□□ 0.64
CDH6-205ENST00000514738 EIF5P55010 431 aaKnown RBP19.04■□□□□ 0.64
CDH6-205ENST00000514738 PARD3BQ8TEW8 1205 aa19.04■□□□□ 0.64
CDH6-205ENST00000514738 BLOC1S6Q9UL45 172 aa19.04■□□□□ 0.64
CDH6-205ENST00000514738 SASH3O75995 380 aa19.04■□□□□ 0.64
CDH6-205ENST00000514738 PECAM1P16284 738 aaPredicted RBP19.04■□□□□ 0.64
CDH6-205ENST00000514738 CASTP20810 708 aaKnown RBP19.04■□□□□ 0.64
CDH6-205ENST00000514738 HDGFL1Q5TGJ6 251 aa19.04■□□□□ 0.64
CDH6-205ENST00000514738 FILIP1Q7Z7B0 1213 aa19.04■□□□□ 0.64
CDH6-205ENST00000514738 FMN1Q68DA7 1419 aa19.04■□□□□ 0.64
CDH6-205ENST00000514738 PTPN14Q15678 1187 aa19.03■□□□□ 0.64
CDH6-205ENST00000514738 WDR63Q8IWG1 891 aa19.03■□□□□ 0.64
CDH6-205ENST00000514738 TMX4Q9H1E5 349 aaPredicted RBP19.03■□□□□ 0.64
CDH6-205ENST00000514738 RANBP17Q9H2T7 1088 aaKnown RBP19.03■□□□□ 0.64
CDH6-205ENST00000514738 SEC31AO94979 1220 aaKnown RBP19.02■□□□□ 0.64
CDH6-205ENST00000514738 FBXW10Q5XX13 1052 aa19.02■□□□□ 0.64
CDH6-205ENST00000514738 CLIP2Q9UDT6 1046 aa19.02■□□□□ 0.64
CDH6-205ENST00000514738 CDKL5O76039 1030 aa19.02■□□□□ 0.64
CDH6-205ENST00000514738 PYGLP06737 847 aa19.02■□□□□ 0.64
CDH6-205ENST00000514738 GCKP35557 465 aa19.02■□□□□ 0.64
CDH6-205ENST00000514738 HHATQ5VTY9 493 aa19.02■□□□□ 0.64
CDH6-205ENST00000514738 KIF9Q9HAQ2 790 aa19.02■□□□□ 0.64
CDH6-205ENST00000514738 LMCD1Q9NZU5 365 aa19.02■□□□□ 0.64
CDH6-205ENST00000514738 USP47Q96K76 1375 aa19.02■□□□□ 0.63
CDH6-205ENST00000514738 NKTRP30414 1462 aaKnown RBP19.02■□□□□ 0.63
CDH6-205ENST00000514738 TBC1D8O95759 1140 aa19.01■□□□□ 0.63
CDH6-205ENST00000514738 MRPL12P52815 198 aaKnown RBP19.01■□□□□ 0.63
CDH6-205ENST00000514738 CCDC171Q6TFL3 1326 aa19.01■□□□□ 0.63
CDH6-205ENST00000514738 NYAP1Q6ZVC0 841 aa19.01■□□□□ 0.63
CDH6-205ENST00000514738 MYLK4Q86YV6 388 aaPredicted RBP19.01■□□□□ 0.63
CDH6-205ENST00000514738 CCDC34Q96HJ3 373 aa19.01■□□□□ 0.63
CDH6-205ENST00000514738 PICK1Q9NRD5 415 aa19.01■□□□□ 0.63
CDH6-205ENST00000514738 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.01■□□□□ 0.63
CDH6-205ENST00000514738 NAP1L1P55209 391 aaKnown RBP19■□□□□ 0.63
CDH6-205ENST00000514738 WDR43Q15061 677 aaKnown RBP eCLIP19■□□□□ 0.63
CDH6-205ENST00000514738 ZSCAN25Q6NSZ9 544 aa19■□□□□ 0.63
CDH6-205ENST00000514738 EXOC8Q8IYI6 725 aa19■□□□□ 0.63
CDH6-205ENST00000514738 MMTAG2Q9BU76 263 aaKnown RBP19■□□□□ 0.63
CDH6-205ENST00000514738 FAM107BQ9H098 131 aa19■□□□□ 0.63
CDH6-205ENST00000514738 ODF2LQ9ULJ1 636 aa19■□□□□ 0.63
CDH6-205ENST00000514738 IRX2Q9BZI1 471 aaPredicted RBP19■□□□□ 0.63
CDH6-205ENST00000514738 ELP1O95163 1332 aa19■□□□□ 0.63
CDH6-205ENST00000514738 IMPDH2P12268 514 aa18.99■□□□□ 0.63
CDH6-205ENST00000514738 RDXP35241 583 aaKnown RBP18.99■□□□□ 0.63
CDH6-205ENST00000514738 PRPHP41219 470 aa18.99■□□□□ 0.63
CDH6-205ENST00000514738 C3orf20Q8ND61 904 aa18.99■□□□□ 0.63
CDH6-205ENST00000514738 LIG3P49916 1009 aa18.98■□□□□ 0.63
CDH6-205ENST00000514738 DDR1Q08345 913 aa18.98■□□□□ 0.63
CDH6-205ENST00000514738 ZBTB10Q96DT7 871 aa18.98■□□□□ 0.63
CDH6-205ENST00000514738 SLX1AQ9BQ83 275 aa18.98■□□□□ 0.63
CDH6-205ENST00000514738 TMCO5BA8MYB1 307 aa18.98■□□□□ 0.63
CDH6-205ENST00000514738 MRFAP1L1Q96HT8 127 aa18.98■□□□□ 0.63
CDH6-205ENST00000514738 NUB1Q9Y5A7 615 aa18.98■□□□□ 0.63
CDH6-205ENST00000514738 DENND4BO75064 1496 aaPredicted RBP18.98■□□□□ 0.63
CDH6-205ENST00000514738 ANKRD30AQ9BXX3 1397 aa18.98■□□□□ 0.63
CDH6-205ENST00000514738 SHROOM2Q13796 1616 aa18.97■□□□□ 0.63
CDH6-205ENST00000514738 RBM47A0AV96 593 aaKnown RBP18.97■□□□□ 0.63
CDH6-205ENST00000514738 RAB27AP51159 221 aa18.97■□□□□ 0.63
CDH6-205ENST00000514738 PREPLQ4J6C6 727 aaPredicted RBP18.97■□□□□ 0.63
CDH6-205ENST00000514738 LRRN4CLQ8ND94 238 aa18.97■□□□□ 0.63
CDH6-205ENST00000514738 RLBP1P12271 317 aa18.97■□□□□ 0.63
CDH6-205ENST00000514738 CCDC183Q5T5S1 534 aa18.97■□□□□ 0.63
CDH6-205ENST00000514738 SDR16C5Q8N3Y7 309 aa18.97■□□□□ 0.63
CDH6-205ENST00000514738 ZGPATQ8N5A5 531 aaKnown RBP18.97■□□□□ 0.63
CDH6-205ENST00000514738 G3BP2Q9UN86 482 aaKnown RBP18.97■□□□□ 0.63
CDH6-205ENST00000514738 FOXD4L5Q5VV16 416 aaPredicted RBP18.96■□□□□ 0.63
CDH6-205ENST00000514738 FOXD4L4Q8WXT5 416 aaPredicted RBP18.96■□□□□ 0.63
CDH6-205ENST00000514738 ZKSCAN4Q969J2 545 aaPredicted RBP18.96■□□□□ 0.63
CDH6-205ENST00000514738 DDX11Q96FC9 970 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms