RNA–Protein interactions for RNA: ENST00000513629.1

CDK7-210, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 885 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-210ENST00000513629 MTFR1LQ9H019 292 aa12.92□□□□□ -0.34
CDK7-210ENST00000513629 LRRC4BQ9NT99 713 aa12.92□□□□□ -0.34
CDK7-210ENST00000513629 NSD3Q9BZ95 1437 aa12.91□□□□□ -0.34
CDK7-210ENST00000513629 NBPF6Q5VWK0 638 aa12.91□□□□□ -0.34
CDK7-210ENST00000513629 ZCRB1Q8TBF4 217 aaKnown RBP12.91□□□□□ -0.34
CDK7-210ENST00000513629 NBPF4Q96M43 638 aa12.91□□□□□ -0.34
CDK7-210ENST00000513629 NSD2O96028 1365 aa12.91□□□□□ -0.34
CDK7-210ENST00000513629 GRXCR2A6NFK2 248 aa12.9□□□□□ -0.34
CDK7-210ENST00000513629 RIMBP2O15034 1052 aa12.9□□□□□ -0.34
CDK7-210ENST00000513629 PRIM1P49642 420 aaKnown RBP12.9□□□□□ -0.34
CDK7-210ENST00000513629 DDX12PQ92771 950 aa12.9□□□□□ -0.34
CDK7-210ENST00000513629 FLT4P35916 1363 aa12.9□□□□□ -0.34
CDK7-210ENST00000513629 HSP90AB2PQ58FF8 381 aa12.89□□□□□ -0.35
CDK7-210ENST00000513629 SLC27A3Q5K4L6 730 aa12.89□□□□□ -0.35
CDK7-210ENST00000513629 RBM26Q5T8P6 1007 aaKnown RBP12.89□□□□□ -0.35
CDK7-210ENST00000513629 FHDC1Q9C0D6 1143 aaPredicted RBP12.89□□□□□ -0.35
CDK7-210ENST00000513629 ZSWIM6Q9HCJ5 1215 aa12.89□□□□□ -0.35
CDK7-210ENST00000513629 GOLGB1Q14789 3259 aaKnown RBP12.88□□□□□ -0.35
CDK7-210ENST00000513629 KCNQ4P56696 695 aa12.88□□□□□ -0.35
CDK7-210ENST00000513629 RAPGEF4Q8WZA2 1011 aa12.88□□□□□ -0.35
CDK7-210ENST00000513629 CARD14Q9BXL6 1004 aa12.88□□□□□ -0.35
CDK7-210ENST00000513629 INSRP06213 1382 aa12.88□□□□□ -0.35
CDK7-210ENST00000513629 KIF24Q5T7B8 1368 aa12.87□□□□□ -0.35
CDK7-210ENST00000513629 ARSIQ5FYB1 569 aa12.87□□□□□ -0.35
CDK7-210ENST00000513629 GPR153Q6NV75 609 aa12.87□□□□□ -0.35
CDK7-210ENST00000513629 ZNF710Q8N1W2 664 aa12.87□□□□□ -0.35
CDK7-210ENST00000513629 KHSRPQ92945 711 aaKnown RBP eCLIP12.87□□□□□ -0.351e-7■□□□□ 11.1
CDK7-210ENST00000513629 SYT17Q9BSW7 474 aa12.87□□□□□ -0.35
CDK7-210ENST00000513629 CGNL1Q0VF96 1302 aa12.87□□□□□ -0.35
CDK7-210ENST00000513629 LY75O60449 1722 aa12.86□□□□□ -0.35
CDK7-210ENST00000513629 SNPHO15079 494 aa12.86□□□□□ -0.35
CDK7-210ENST00000513629 TATP17735 454 aaPredicted RBP12.86□□□□□ -0.35
CDK7-210ENST00000513629 ARXQ96QS3 562 aa12.86□□□□□ -0.35
CDK7-210ENST00000513629 PCGF6Q9BYE7 350 aa12.86□□□□□ -0.35
CDK7-210ENST00000513629 EMILIN1Q9Y6C2 1016 aa12.86□□□□□ -0.35
CDK7-210ENST00000513629 PNPLA7Q6ZV29 1317 aa12.86□□□□□ -0.35
CDK7-210ENST00000513629 PCDH11XQ9BZA7 1347 aa12.86□□□□□ -0.35
CDK7-210ENST00000513629 PCDH11YQ9BZA8 1340 aa12.86□□□□□ -0.35
CDK7-210ENST00000513629 TUBGCP6Q96RT7 1819 aa12.85□□□□□ -0.35
CDK7-210ENST00000513629 QSER1Q2KHR3 1735 aa12.85□□□□□ -0.35
CDK7-210ENST00000513629 NUDT7P0C024 238 aa12.85□□□□□ -0.35
CDK7-210ENST00000513629 TFCP2L1Q9NZI6 479 aa12.85□□□□□ -0.35
CDK7-210ENST00000513629 CCNL1Q9UK58 526 aaPredicted RBP12.85□□□□□ -0.35
CDK7-210ENST00000513629 TIMELESSQ9UNS1 1208 aa12.85□□□□□ -0.35
CDK7-210ENST00000513629 PPM1GO15355 546 aaPredicted RBP12.84□□□□□ -0.35
CDK7-210ENST00000513629 OSBPP22059 807 aa12.84□□□□□ -0.35
CDK7-210ENST00000513629 POLR3GLQ9BT43 218 aa12.84□□□□□ -0.35
CDK7-210ENST00000513629 ANKRD26Q9UPS8 1709 aa12.84□□□□□ -0.35
CDK7-210ENST00000513629 CLSPNQ9HAW4 1339 aa12.84□□□□□ -0.35
CDK7-210ENST00000513629 MAP3K5Q99683 1374 aa12.83□□□□□ -0.36
CDK7-210ENST00000513629 ZC3H15Q8WU90 426 aaKnown RBP12.83□□□□□ -0.36
CDK7-210ENST00000513629 SLC16A10Q8TF71 515 aa12.82□□□□□ -0.36
CDK7-210ENST00000513629 PKD1L3Q7Z443 1732 aa12.82□□□□□ -0.36
CDK7-210ENST00000513629 TOGARAM1Q9Y4F4 1720 aa12.82□□□□□ -0.36
CDK7-210ENST00000513629 NCAPD2Q15021 1401 aa12.81□□□□□ -0.36
CDK7-210ENST00000513629 CYP27B1O15528 508 aa12.81□□□□□ -0.36
CDK7-210ENST00000513629 POLD1P28340 1107 aa12.81□□□□□ -0.36
CDK7-210ENST00000513629 PALLDQ8WX93 1383 aa12.81□□□□□ -0.36
CDK7-210ENST00000513629 PHF14O94880 888 aa12.8□□□□□ -0.36
CDK7-210ENST00000513629 MPRIPQ6WCQ1 1025 aa12.8□□□□□ -0.36
CDK7-210ENST00000513629 GPIHBP1Q8IV16 184 aa12.8□□□□□ -0.36
CDK7-210ENST00000513629 C5P01031 1676 aa12.8□□□□□ -0.36
CDK7-210ENST00000513629 COL24A1Q17RW2 1714 aa12.79□□□□□ -0.36
CDK7-210ENST00000513629 WASHC2AQ641Q2 1341 aa12.79□□□□□ -0.36
CDK7-210ENST00000513629 TNNT2P45379 298 aaPredicted RBP12.78□□□□□ -0.36
CDK7-210ENST00000513629 COL23A1Q86Y22 540 aaPredicted RBP12.78□□□□□ -0.36
CDK7-210ENST00000513629 EYA1Q99502 592 aa12.78□□□□□ -0.36
CDK7-210ENST00000513629 POLKQ9UBT6 870 aa12.78□□□□□ -0.36
CDK7-210ENST00000513629 PCDHGA10Q9Y5H3 936 aa12.78□□□□□ -0.36
CDK7-210ENST00000513629 HSPA5P11021 654 aaKnown RBP12.77□□□□□ -0.37
CDK7-210ENST00000513629 MSL1Q68DK7 614 aa12.77□□□□□ -0.37
CDK7-210ENST00000513629 EPAS1Q99814 870 aa12.77□□□□□ -0.37
CDK7-210ENST00000513629 SPG7Q9UQ90 795 aa12.77□□□□□ -0.37
CDK7-210ENST00000513629 MAP2P11137 1827 aaKnown RBP12.76□□□□□ -0.37
CDK7-210ENST00000513629 ITGB4P16144 1822 aa12.76□□□□□ -0.37
CDK7-210ENST00000513629 HOXB1P14653 301 aaPredicted RBP12.76□□□□□ -0.37
CDK7-210ENST00000513629 EIF4G2P78344 907 aaKnown RBP eCLIP12.76□□□□□ -0.37
CDK7-210ENST00000513629 GPR162Q16538 588 aa12.76□□□□□ -0.37
CDK7-210ENST00000513629 ZNF784Q8NCA9 323 aaPredicted RBP12.76□□□□□ -0.37
CDK7-210ENST00000513629 NLGN2Q8NFZ4 835 aa12.76□□□□□ -0.37
CDK7-210ENST00000513629 C4BP0C0L5 1744 aa12.75□□□□□ -0.37
CDK7-210ENST00000513629 FOSBP53539 338 aa12.75□□□□□ -0.37
CDK7-210ENST00000513629 EIF4A2Q14240 407 aaKnown RBP12.75□□□□□ -0.37
CDK7-210ENST00000513629 TAF1LQ8IZX4 1826 aa12.75□□□□□ -0.37
CDK7-210ENST00000513629 PIGBQ92521 554 aa12.75□□□□□ -0.37
CDK7-210ENST00000513629 SMARCC1Q92922 1105 aaPredicted RBP12.75□□□□□ -0.37
CDK7-210ENST00000513629 TYW1BQ6NUM6 668 aa12.74□□□□□ -0.37
CDK7-210ENST00000513629 CCER1Q8TC90 406 aaPredicted RBP12.74□□□□□ -0.37
CDK7-210ENST00000513629 AK7Q96M32 723 aa12.74□□□□□ -0.37
CDK7-210ENST00000513629 CHD4Q14839 1912 aa12.73□□□□□ -0.37
CDK7-210ENST00000513629 GPR37O15354 613 aa12.73□□□□□ -0.37
CDK7-210ENST00000513629 PHKG2P15735 406 aa12.73□□□□□ -0.37
CDK7-210ENST00000513629 AMIGO3Q86WK7 504 aa12.73□□□□□ -0.37
CDK7-210ENST00000513629 ZNF454Q8N9F8 522 aa12.73□□□□□ -0.37
CDK7-210ENST00000513629 PANK3Q9H999 370 aa12.73□□□□□ -0.37
CDK7-210ENST00000513629 TMOD3Q9NYL9 352 aa12.73□□□□□ -0.37
CDK7-210ENST00000513629 LHX6Q9UPM6 363 aa12.73□□□□□ -0.37
CDK7-210ENST00000513629 IGSF1Q8N6C5 1336 aa12.72□□□□□ -0.37
CDK7-210ENST00000513629 ZMYND10O75800 440 aa12.72□□□□□ -0.37
CDK7-210ENST00000513629 IFNL2Q8IZJ0 200 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms