RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 ZNF530Q6P9A1 599 aaPredicted RBP19.19■□□□□ 0.66
SPCS3-204ENST00000513139 SRP68Q9UHB9 627 aaKnown RBP19.19■□□□□ 0.66
SPCS3-204ENST00000513139 NRXN2Q9P2S2 1712 aa19.19■□□□□ 0.66
SPCS3-204ENST00000513139 POLRMTO00411 1230 aaKnown RBP19.18■□□□□ 0.66
SPCS3-204ENST00000513139 MTHFSP49914 203 aa19.18■□□□□ 0.66
SPCS3-204ENST00000513139 TIAM2Q8IVF5 1701 aa19.17■□□□□ 0.66
SPCS3-204ENST00000513139 VIRMAQ69YN4 1812 aaKnown RBP19.16■□□□□ 0.66
SPCS3-204ENST00000513139 VEGFAP15692 232 aaPredicted RBP19.16■□□□□ 0.66
SPCS3-204ENST00000513139 C1orf141Q5JVX7 400 aa19.16■□□□□ 0.66
SPCS3-204ENST00000513139 NFATC2IPQ8NCF5 419 aa19.16■□□□□ 0.66
SPCS3-204ENST00000513139 DICER1Q9UPY3 1922 aaKnown RBP19.15■□□□□ 0.66
SPCS3-204ENST00000513139 GLTPD2A6NH11 291 aa19.15■□□□□ 0.66
SPCS3-204ENST00000513139 CAPN15O75808 1086 aa19.15■□□□□ 0.66
SPCS3-204ENST00000513139 LMNB1P20700 586 aa19.15■□□□□ 0.66
SPCS3-204ENST00000513139 TNNT2P45379 298 aaPredicted RBP19.15■□□□□ 0.66
SPCS3-204ENST00000513139 INTS5Q6P9B9 1019 aaKnown RBP19.15■□□□□ 0.66
SPCS3-204ENST00000513139 ZPR1O75312 459 aa19.14■□□□□ 0.65
SPCS3-204ENST00000513139 RASSF7Q02833 373 aa19.12■□□□□ 0.65
SPCS3-204ENST00000513139 SOS1Q07889 1333 aaPredicted RBP19.11■□□□□ 0.65
SPCS3-204ENST00000513139 HSPA1AP0DMV8 641 aaKnown RBP19.11■□□□□ 0.65
SPCS3-204ENST00000513139 HSPA1BP0DMV9 641 aaKnown RBP19.11■□□□□ 0.65
SPCS3-204ENST00000513139 USPL1Q5W0Q7 1092 aa19.1■□□□□ 0.65
SPCS3-204ENST00000513139 NFIXQ14938 502 aa19.09■□□□□ 0.65
SPCS3-204ENST00000513139 TTLL6Q8N841 843 aa19.09■□□□□ 0.65
SPCS3-204ENST00000513139 NARFQ9UHQ1 456 aa19.09■□□□□ 0.65
SPCS3-204ENST00000513139 FER1L6Q2WGJ9 1857 aa19.09■□□□□ 0.65
SPCS3-204ENST00000513139 AEBP1Q8IUX7 1158 aa19.08■□□□□ 0.64
SPCS3-204ENST00000513139 DNAJC10Q8IXB1 793 aa19.08■□□□□ 0.64
SPCS3-204ENST00000513139 CYP19A1P11511 503 aaPredicted RBP19.07■□□□□ 0.64
SPCS3-204ENST00000513139 COL15A1P39059 1388 aa19.06■□□□□ 0.64
SPCS3-204ENST00000513139 ANKRD31Q8N7Z5 1873 aa19.06■□□□□ 0.64
SPCS3-204ENST00000513139 MRC1P22897 1456 aa19.06■□□□□ 0.64
SPCS3-204ENST00000513139 SERPINB2P05120 415 aa19.06■□□□□ 0.64
SPCS3-204ENST00000513139 DPY19L2Q6NUT2 758 aa19.06■□□□□ 0.64
SPCS3-204ENST00000513139 SLC52A2Q9HAB3 445 aa19.06■□□□□ 0.64
SPCS3-204ENST00000513139 H0YIN7 160 aa19.05■□□□□ 0.64
SPCS3-204ENST00000513139 AKAP4Q5JQC9 854 aa19.05■□□□□ 0.64
SPCS3-204ENST00000513139 SULT6B1Q6IMI4 303 aa19.05■□□□□ 0.64
SPCS3-204ENST00000513139 UBR2Q8IWV8 1755 aa19.04■□□□□ 0.64
SPCS3-204ENST00000513139 POTECB2RU33 542 aa19.04■□□□□ 0.64
SPCS3-204ENST00000513139 NFKBIEO00221 500 aa19.04■□□□□ 0.64
SPCS3-204ENST00000513139 C2CD5Q86YS7 1000 aa19.04■□□□□ 0.64
SPCS3-204ENST00000513139 VSIG10Q8N0Z9 540 aa19.03■□□□□ 0.64
SPCS3-204ENST00000513139 BCL2L12Q9HB09 334 aa19.03■□□□□ 0.64
SPCS3-204ENST00000513139 TIMELESSQ9UNS1 1208 aa19.03■□□□□ 0.64
SPCS3-204ENST00000513139 PDZRN3Q9UPQ7 1066 aa19.03■□□□□ 0.64
SPCS3-204ENST00000513139 CREBZFQ9NS37 354 aa19.02■□□□□ 0.64
SPCS3-204ENST00000513139 POLR3GLQ9BT43 218 aa19.01■□□□□ 0.63
SPCS3-204ENST00000513139 PANK3Q9H999 370 aa19.01■□□□□ 0.63
SPCS3-204ENST00000513139 ZBTB1Q9Y2K1 713 aa19.01■□□□□ 0.63
SPCS3-204ENST00000513139 IL13P35225 146 aa19■□□□□ 0.63
SPCS3-204ENST00000513139 MORC1Q86VD1 984 aa19■□□□□ 0.63
SPCS3-204ENST00000513139 LGR6Q9HBX8 967 aa19■□□□□ 0.63
SPCS3-204ENST00000513139 COL11A2P13942 1736 aaPredicted RBP19■□□□□ 0.63
SPCS3-204ENST00000513139 CACNA1SQ13698 1873 aa18.99■□□□□ 0.63
SPCS3-204ENST00000513139 ARFGEF2Q9Y6D5 1785 aa18.99■□□□□ 0.63
SPCS3-204ENST00000513139 CARMIL3Q8ND23 1372 aa18.99■□□□□ 0.63
SPCS3-204ENST00000513139 RNMTO43148 476 aaKnown RBP18.99■□□□□ 0.63
SPCS3-204ENST00000513139 ATXN8OSP0DMR3 200 aa18.99■□□□□ 0.63
SPCS3-204ENST00000513139 SCN4AP35499 1836 aa18.99■□□□□ 0.63
SPCS3-204ENST00000513139 LTBP3Q9NS15 1303 aa18.99■□□□□ 0.63
SPCS3-204ENST00000513139 PDE6BP35913 854 aa18.98■□□□□ 0.63
SPCS3-204ENST00000513139 SLC39A6Q13433 755 aa18.98■□□□□ 0.63
SPCS3-204ENST00000513139 ERFEQ4G0M1 354 aa18.98■□□□□ 0.63
SPCS3-204ENST00000513139 CHADLQ6NUI6 762 aa18.98■□□□□ 0.63
SPCS3-204ENST00000513139 SCN7AQ01118 1682 aa18.98■□□□□ 0.63
SPCS3-204ENST00000513139 A0A087WZG4 1122 aa18.97■□□□□ 0.63
SPCS3-204ENST00000513139 BRIP1Q9BX63 1249 aa18.97■□□□□ 0.63
SPCS3-204ENST00000513139 SLX4Q8IY92 1834 aa18.96■□□□□ 0.63
SPCS3-204ENST00000513139 EIF5P55010 431 aaKnown RBP18.96■□□□□ 0.63
SPCS3-204ENST00000513139 SAMD1Q6SPF0 538 aaPredicted RBP18.96■□□□□ 0.63
SPCS3-204ENST00000513139 U3KPZ7 1027 aaPredicted RBP18.96■□□□□ 0.63
SPCS3-204ENST00000513139 C21orf2O43822 256 aa18.95■□□□□ 0.62
SPCS3-204ENST00000513139 STARD3NLO95772 234 aa18.95■□□□□ 0.62
SPCS3-204ENST00000513139 ZNF622Q969S3 477 aaKnown RBP eCLIP18.95■□□□□ 0.628e-11■■□□□ 14.4
SPCS3-204ENST00000513139 CANXP27824 592 aaKnown RBP18.94■□□□□ 0.62
SPCS3-204ENST00000513139 PRDM10Q9NQV6 1147 aa18.94■□□□□ 0.62
SPCS3-204ENST00000513139 MKRN1Q9UHC7 482 aaKnown RBP18.94■□□□□ 0.62
SPCS3-204ENST00000513139 CNTNAP1P78357 1384 aa18.93■□□□□ 0.62
SPCS3-204ENST00000513139 BICDL1Q6ZP65 573 aa18.93■□□□□ 0.62
SPCS3-204ENST00000513139 TAOK3Q9H2K8 898 aa18.93■□□□□ 0.62
SPCS3-204ENST00000513139 SIPA1L3O60292 1781 aaPredicted RBP18.92■□□□□ 0.62
SPCS3-204ENST00000513139 SOGA3Q5TF21 947 aa18.92■□□□□ 0.62
SPCS3-204ENST00000513139 TBC1D9BQ66K14 1250 aa18.92■□□□□ 0.62
SPCS3-204ENST00000513139 PRR5LQ6MZQ0 368 aa18.92■□□□□ 0.62
SPCS3-204ENST00000513139 IQCA1LA6NCM1 817 aa18.91■□□□□ 0.62
SPCS3-204ENST00000513139 FOXN1O15353 648 aa18.91■□□□□ 0.62
SPCS3-204ENST00000513139 CNKSR1Q969H4 720 aa18.91■□□□□ 0.62
SPCS3-204ENST00000513139 TEX13AQ9BXU3 409 aaPredicted RBP18.91■□□□□ 0.62
SPCS3-204ENST00000513139 PASKQ96RG2 1323 aa18.91■□□□□ 0.62
SPCS3-204ENST00000513139 DDNO94850 711 aaPredicted RBP18.9■□□□□ 0.62
SPCS3-204ENST00000513139 POTEIP0CG38 1075 aa18.9■□□□□ 0.62
SPCS3-204ENST00000513139 POTEJP0CG39 1038 aa18.9■□□□□ 0.62
SPCS3-204ENST00000513139 EIF4G2P78344 907 aaKnown RBP eCLIP18.9■□□□□ 0.62
SPCS3-204ENST00000513139 STYK1Q6J9G0 422 aa18.9■□□□□ 0.62
SPCS3-204ENST00000513139 LDHDQ86WU2 507 aa18.9■□□□□ 0.62
SPCS3-204ENST00000513139 TTC5Q8N0Z6 440 aa18.9■□□□□ 0.62
SPCS3-204ENST00000513139 ZNF219Q9P2Y4 722 aaPredicted RBP18.9■□□□□ 0.62
SPCS3-204ENST00000513139 KNSTRNQ9Y448 316 aa18.9■□□□□ 0.62
SPCS3-204ENST00000513139 BCORQ6W2J9 1755 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms