RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 TSPAN6O43657 245 aa7.9□□□□□ -1.14
TRAPPC11-209ENST00000512476 CDC27P30260 824 aa7.9□□□□□ -1.14
TRAPPC11-209ENST00000512476 DPYDQ12882 1025 aa7.9□□□□□ -1.14
TRAPPC11-209ENST00000512476 TOMM20Q15388 145 aa7.9□□□□□ -1.14
TRAPPC11-209ENST00000512476 NBPF1Q3BBV0 1214 aa7.9□□□□□ -1.14
TRAPPC11-209ENST00000512476 ARMC3Q5W041 872 aa7.9□□□□□ -1.14
TRAPPC11-209ENST00000512476 CCSAPQ6IQ19 270 aaPredicted RBP7.9□□□□□ -1.14
TRAPPC11-209ENST00000512476 PPP4R4Q6NUP7 873 aa7.9□□□□□ -1.14
TRAPPC11-209ENST00000512476 CENPOQ9BU64 300 aa7.9□□□□□ -1.14
TRAPPC11-209ENST00000512476 MAPK8P45983 427 aa7.9□□□□□ -1.15
TRAPPC11-209ENST00000512476 NFE2L2Q16236 605 aa7.9□□□□□ -1.15
TRAPPC11-209ENST00000512476 NFE2Q16621 373 aaPredicted RBP7.9□□□□□ -1.15
TRAPPC11-209ENST00000512476 CCDC93Q567U6 631 aa7.9□□□□□ -1.15
TRAPPC11-209ENST00000512476 CASC1Q6TDU7 716 aa7.9□□□□□ -1.15
TRAPPC11-209ENST00000512476 PAF1Q8N7H5 531 aa7.9□□□□□ -1.15
TRAPPC11-209ENST00000512476 SYMPKQ92797 1274 aaKnown RBP7.9□□□□□ -1.15
TRAPPC11-209ENST00000512476 KIF12Q96FN5 646 aa7.9□□□□□ -1.15
TRAPPC11-209ENST00000512476 METTL5Q9NRN9 209 aaKnown RBP7.9□□□□□ -1.15
TRAPPC11-209ENST00000512476 POU3F3P20264 500 aaPredicted RBP7.89□□□□□ -1.15
TRAPPC11-209ENST00000512476 DSG3P32926 999 aa7.89□□□□□ -1.15
TRAPPC11-209ENST00000512476 SH3TC2Q8TF17 1288 aa7.89□□□□□ -1.15
TRAPPC11-209ENST00000512476 HOMER2Q9NSB8 354 aa7.89□□□□□ -1.15
TRAPPC11-209ENST00000512476 SEC13P55735 322 aa7.89□□□□□ -1.15
TRAPPC11-209ENST00000512476 NCOA4Q13772 614 aa7.89□□□□□ -1.15
TRAPPC11-209ENST00000512476 BRD3Q15059 726 aa7.89□□□□□ -1.15
TRAPPC11-209ENST00000512476 PXYLP1Q8TE99 480 aa7.89□□□□□ -1.15
TRAPPC11-209ENST00000512476 ESYT3A0FGR9 886 aa7.88□□□□□ -1.15
TRAPPC11-209ENST00000512476 TBX3O15119 743 aa7.88□□□□□ -1.15
TRAPPC11-209ENST00000512476 NPHP1O15259 732 aa7.88□□□□□ -1.15
TRAPPC11-209ENST00000512476 ZRANB2O95218 330 aaKnown RBP eCLIP7.88□□□□□ -1.15
TRAPPC11-209ENST00000512476 SCGB1D2O95969 90 aa7.88□□□□□ -1.15
TRAPPC11-209ENST00000512476 LDHBP07195 334 aaKnown RBP7.88□□□□□ -1.15
TRAPPC11-209ENST00000512476 SKIP12755 728 aa7.88□□□□□ -1.15
TRAPPC11-209ENST00000512476 MASP1P48740 699 aa7.88□□□□□ -1.15
TRAPPC11-209ENST00000512476 INO80DQ53TQ3 878 aaPredicted RBP7.88□□□□□ -1.15
TRAPPC11-209ENST00000512476 FRMD6Q96NE9 622 aa7.88□□□□□ -1.15
TRAPPC11-209ENST00000512476 CNTN3Q9P232 1028 aa7.88□□□□□ -1.15
TRAPPC11-209ENST00000512476 SLC45A1Q9Y2W3 748 aa7.88□□□□□ -1.15
TRAPPC11-209ENST00000512476 FMNL1O95466 1100 aaPredicted RBP7.88□□□□□ -1.15
TRAPPC11-209ENST00000512476 ATF4P18848 351 aaPredicted RBP7.88□□□□□ -1.15
TRAPPC11-209ENST00000512476 MAPRE1Q15691 268 aaKnown RBP7.88□□□□□ -1.15
TRAPPC11-209ENST00000512476 GLIPR1L2Q4G1C9 344 aa7.88□□□□□ -1.15
TRAPPC11-209ENST00000512476 TMC4Q7Z404 712 aa7.88□□□□□ -1.15
TRAPPC11-209ENST00000512476 TYW1Q9NV66 732 aaKnown RBP7.88□□□□□ -1.15
TRAPPC11-209ENST00000512476 TAGLN3Q9UI15 199 aa7.88□□□□□ -1.15
TRAPPC11-209ENST00000512476 NUB1Q9Y5A7 615 aa7.88□□□□□ -1.15
TRAPPC11-209ENST00000512476 CDC45O75419 566 aa7.87□□□□□ -1.15
TRAPPC11-209ENST00000512476 CTSHP09668 335 aa7.87□□□□□ -1.15
TRAPPC11-209ENST00000512476 COL19A1Q14993 1142 aa7.87□□□□□ -1.15
TRAPPC11-209ENST00000512476 ZNF579Q8NAF0 562 aaKnown RBP7.87□□□□□ -1.15
TRAPPC11-209ENST00000512476 PURBQ96QR8 312 aaKnown RBP7.87□□□□□ -1.15
TRAPPC11-209ENST00000512476 SRA1Q9HD15 236 aaKnown RBP7.87□□□□□ -1.15
TRAPPC11-209ENST00000512476 GEMIN8Q9NWZ8 242 aaKnown RBP7.87□□□□□ -1.15
TRAPPC11-209ENST00000512476 SNTG2Q9NY99 539 aa7.87□□□□□ -1.15
TRAPPC11-209ENST00000512476 EGFL7Q9UHF1 273 aa7.87□□□□□ -1.15
TRAPPC11-209ENST00000512476 MRPS23Q9Y3D9 190 aaKnown RBP7.87□□□□□ -1.15
TRAPPC11-209ENST00000512476 GJA3Q9Y6H8 435 aa7.87□□□□□ -1.15
TRAPPC11-209ENST00000512476 SHTN1A0MZ66 631 aa7.87□□□□□ -1.15
TRAPPC11-209ENST00000512476 TCERG1O14776 1098 aaKnown RBP7.87□□□□□ -1.15
TRAPPC11-209ENST00000512476 HIP1RO75146 1068 aa7.87□□□□□ -1.15
TRAPPC11-209ENST00000512476 RNASEH2AO75792 299 aaKnown RBP7.87□□□□□ -1.15
TRAPPC11-209ENST00000512476 ALDH1L1O75891 902 aa7.87□□□□□ -1.15
TRAPPC11-209ENST00000512476 ANKMY2Q8IV38 441 aa7.87□□□□□ -1.15
TRAPPC11-209ENST00000512476 PLPP6Q8IY26 295 aa7.87□□□□□ -1.15
TRAPPC11-209ENST00000512476 ZNF408Q9H9D4 720 aa7.87□□□□□ -1.15
TRAPPC11-209ENST00000512476 KRT18P05783 430 aaKnown RBP7.86□□□□□ -1.15
TRAPPC11-209ENST00000512476 PTGER2P43116 358 aa7.86□□□□□ -1.15
TRAPPC11-209ENST00000512476 CLDN10P78369 228 aa7.86□□□□□ -1.15
TRAPPC11-209ENST00000512476 FOXK1P85037 733 aa7.86□□□□□ -1.15
TRAPPC11-209ENST00000512476 TTF1Q15361 905 aaPredicted RBP7.86□□□□□ -1.15
TRAPPC11-209ENST00000512476 ERAP2Q6P179 960 aa7.86□□□□□ -1.15
TRAPPC11-209ENST00000512476 TAS1R3Q7RTX0 852 aa7.86□□□□□ -1.15
TRAPPC11-209ENST00000512476 CHPFQ8IZ52 775 aa7.86□□□□□ -1.15
TRAPPC11-209ENST00000512476 LILRB2Q8N423 598 aa7.86□□□□□ -1.15
TRAPPC11-209ENST00000512476 ANP32EQ9BTT0 268 aa7.86□□□□□ -1.15
TRAPPC11-209ENST00000512476 NEUROD4Q9HD90 331 aa7.86□□□□□ -1.15
TRAPPC11-209ENST00000512476 PPP1R12AO14974 1030 aaPredicted RBP7.86□□□□□ -1.15
TRAPPC11-209ENST00000512476 TREHO43280 583 aa7.86□□□□□ -1.15
TRAPPC11-209ENST00000512476 PRPF3O43395 683 aaKnown RBP7.86□□□□□ -1.15
TRAPPC11-209ENST00000512476 SLC26A4O43511 780 aa7.86□□□□□ -1.15
TRAPPC11-209ENST00000512476 GPSM2P81274 684 aa7.86□□□□□ -1.15
TRAPPC11-209ENST00000512476 DAB2P98082 770 aa7.86□□□□□ -1.15
TRAPPC11-209ENST00000512476 ALDH1L2Q3SY69 923 aa7.86□□□□□ -1.15
TRAPPC11-209ENST00000512476 DRC7Q8IY82 874 aa7.86□□□□□ -1.15
TRAPPC11-209ENST00000512476 SAMD3Q8N6K7 520 aa7.86□□□□□ -1.15
TRAPPC11-209ENST00000512476 MYRIPQ8NFW9 859 aa7.86□□□□□ -1.15
TRAPPC11-209ENST00000512476 HLA-CQ95604 372 aa7.86□□□□□ -1.15
TRAPPC11-209ENST00000512476 HDAC9Q9UKV0 1011 aa7.86□□□□□ -1.15
TRAPPC11-209ENST00000512476 PRKAB1Q9Y478 270 aa7.86□□□□□ -1.15
TRAPPC11-209ENST00000512476 MRVI1Q9Y6F6 885 aa7.86□□□□□ -1.15
TRAPPC11-209ENST00000512476 IGHDP01880 384 aa7.85□□□□□ -1.15
TRAPPC11-209ENST00000512476 FMR1Q06787 632 aaKnown RBP eCLIP7.85□□□□□ -1.15
TRAPPC11-209ENST00000512476 RAPGEF1Q13905 1077 aa7.85□□□□□ -1.15
TRAPPC11-209ENST00000512476 RASA3Q14644 834 aa7.85□□□□□ -1.15
TRAPPC11-209ENST00000512476 SOGA3Q5TF21 947 aa7.85□□□□□ -1.15
TRAPPC11-209ENST00000512476 ALDH8A1Q9H2A2 487 aaPredicted RBP7.85□□□□□ -1.15
TRAPPC11-209ENST00000512476 MAN1A1P33908 653 aa7.85□□□□□ -1.15
TRAPPC11-209ENST00000512476 DIXDC1Q155Q3 683 aa7.85□□□□□ -1.15
TRAPPC11-209ENST00000512476 TUSC1Q2TAM9 212 aa7.85□□□□□ -1.15
TRAPPC11-209ENST00000512476 SLC4A8Q2Y0W8 1093 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms