RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 KIF13AQ9H1H9 1805 aa14.38□□□□□ -0.11
PRDM16-207ENST00000512462 SYAP1Q96A49 352 aaPredicted RBP14.38□□□□□ -0.11
PRDM16-207ENST00000512462 ROBO2Q9HCK4 1378 aa14.38□□□□□ -0.11
PRDM16-207ENST00000512462 GCP02774 474 aa14.38□□□□□ -0.11
PRDM16-207ENST00000512462 SKOR2Q2VWA4 1001 aaPredicted RBP14.38□□□□□ -0.11
PRDM16-207ENST00000512462 NFATC2IPQ8NCF5 419 aa14.38□□□□□ -0.11
PRDM16-207ENST00000512462 SPATA31D1Q6ZQQ2 1576 aa14.38□□□□□ -0.11
PRDM16-207ENST00000512462 CCDC83Q8IWF9 413 aa14.38□□□□□ -0.11
PRDM16-207ENST00000512462 KCNH5Q8NCM2 988 aa14.38□□□□□ -0.11
PRDM16-207ENST00000512462 BICD2Q8TD16 824 aa14.38□□□□□ -0.11
PRDM16-207ENST00000512462 DDX11Q96FC9 970 aa14.38□□□□□ -0.11
PRDM16-207ENST00000512462 NDUFB9Q9Y6M9 179 aa14.38□□□□□ -0.11
PRDM16-207ENST00000512462 SHPRHQ149N8 1683 aa14.37□□□□□ -0.11
PRDM16-207ENST00000512462 ALKQ9UM73 1620 aa14.37□□□□□ -0.11
PRDM16-207ENST00000512462 ARHGEF40Q8TER5 1519 aa14.37□□□□□ -0.11
PRDM16-207ENST00000512462 GRPEL1Q9HAV7 217 aa14.37□□□□□ -0.11
PRDM16-207ENST00000512462 SNRKQ9NRH2 765 aa14.37□□□□□ -0.11
PRDM16-207ENST00000512462 GPTP24298 496 aa14.37□□□□□ -0.11
PRDM16-207ENST00000512462 SF3A1Q15459 793 aaKnown RBP14.37□□□□□ -0.11
PRDM16-207ENST00000512462 ARHGAP45Q92619 1136 aa14.37□□□□□ -0.11
PRDM16-207ENST00000512462 SYCE3A1L190 88 aa14.36□□□□□ -0.11
PRDM16-207ENST00000512462 CHL1O00533 1208 aa14.36□□□□□ -0.11
PRDM16-207ENST00000512462 NBPF7P0C2Y1 421 aaPredicted RBP14.36□□□□□ -0.11
PRDM16-207ENST00000512462 DCTPP1Q9H773 170 aa14.36□□□□□ -0.11
PRDM16-207ENST00000512462 MTMR7Q9Y216 660 aa14.36□□□□□ -0.11
PRDM16-207ENST00000512462 FLT4P35916 1363 aa14.36□□□□□ -0.11
PRDM16-207ENST00000512462 KIF1BPQ96EK5 621 aa14.36□□□□□ -0.11
PRDM16-207ENST00000512462 PTPRCP08575 1304 aa14.36□□□□□ -0.11
PRDM16-207ENST00000512462 MRE11P49959 708 aa14.36□□□□□ -0.11
PRDM16-207ENST00000512462 CREBRFQ8IUR6 639 aa14.36□□□□□ -0.11
PRDM16-207ENST00000512462 A2ML1A8K2U0 1454 aa14.35□□□□□ -0.11
PRDM16-207ENST00000512462 COPS6Q7L5N1 327 aa14.35□□□□□ -0.11
PRDM16-207ENST00000512462 RHPN1Q8TCX5 695 aa14.35□□□□□ -0.11
PRDM16-207ENST00000512462 DBF4Q9UBU7 674 aaPredicted RBP14.35□□□□□ -0.11
PRDM16-207ENST00000512462 A0A087WZG4 1122 aa14.35□□□□□ -0.11
PRDM16-207ENST00000512462 ADAMTS2O95450 1211 aa14.35□□□□□ -0.11
PRDM16-207ENST00000512462 IL17REQ8NFR9 667 aa14.35□□□□□ -0.11
PRDM16-207ENST00000512462 RAB11FIP4Q86YS3 637 aa14.35□□□□□ -0.11
PRDM16-207ENST00000512462 EDC4Q6P2E9 1401 aaKnown RBP14.34□□□□□ -0.11
PRDM16-207ENST00000512462 TMEM2Q9UHN6 1383 aa14.34□□□□□ -0.11
PRDM16-207ENST00000512462 XAGE3Q8WTP9 111 aa14.34□□□□□ -0.11
PRDM16-207ENST00000512462 LRRC2Q9BYS8 371 aa14.34□□□□□ -0.11
PRDM16-207ENST00000512462 USP19O94966 1318 aa14.34□□□□□ -0.11
PRDM16-207ENST00000512462 CD2BP2O95400 341 aaKnown RBP14.34□□□□□ -0.11
PRDM16-207ENST00000512462 ATP2B1P20020 1258 aa14.34□□□□□ -0.11
PRDM16-207ENST00000512462 PRAMEF22A3QJZ6 481 aa14.33□□□□□ -0.11
PRDM16-207ENST00000512462 SIRT2Q8IXJ6 389 aa14.33□□□□□ -0.11
PRDM16-207ENST00000512462 GSPT1P15170 499 aaKnown RBP14.33□□□□□ -0.12
PRDM16-207ENST00000512462 RNF20Q5VTR2 975 aa14.33□□□□□ -0.12
PRDM16-207ENST00000512462 PTMSP20962 102 aa14.33□□□□□ -0.12
PRDM16-207ENST00000512462 PIP4K2BP78356 416 aa14.33□□□□□ -0.12
PRDM16-207ENST00000512462 KIAA2012Q0VF49 1180 aa14.33□□□□□ -0.12
PRDM16-207ENST00000512462 NECAB1Q8N987 351 aa14.33□□□□□ -0.12
PRDM16-207ENST00000512462 CYP46A1Q9Y6A2 500 aa14.31□□□□□ -0.12
PRDM16-207ENST00000512462 CPLX1O14810 134 aa14.31□□□□□ -0.12
PRDM16-207ENST00000512462 GUCY1B3Q02153 619 aa14.31□□□□□ -0.12
PRDM16-207ENST00000512462 RRP12Q5JTH9 1297 aaKnown RBP14.31□□□□□ -0.12
PRDM16-207ENST00000512462 DDX46Q7L014 1031 aaKnown RBP14.31□□□□□ -0.12
PRDM16-207ENST00000512462 TBX22Q9Y458 520 aa14.31□□□□□ -0.12
PRDM16-207ENST00000512462 TTC21AQ8NDW8 1320 aa14.31□□□□□ -0.12
PRDM16-207ENST00000512462 BAG4O95429 457 aaKnown RBP14.31□□□□□ -0.12
PRDM16-207ENST00000512462 BICDL1Q6ZP65 573 aa14.31□□□□□ -0.12
PRDM16-207ENST00000512462 SETD1AO15047 1707 aaKnown RBP14.31□□□□□ -0.12
PRDM16-207ENST00000512462 PKP1Q13835 747 aa14.3□□□□□ -0.12
PRDM16-207ENST00000512462 SPC24Q8NBT2 197 aa14.3□□□□□ -0.12
PRDM16-207ENST00000512462 TMX3Q96JJ7 454 aa14.3□□□□□ -0.12
PRDM16-207ENST00000512462 PDRG1Q9NUG6 133 aa14.3□□□□□ -0.12
PRDM16-207ENST00000512462 CD163L1Q9NR16 1453 aa14.3□□□□□ -0.12
PRDM16-207ENST00000512462 RAB11FIP3O75154 756 aa14.29□□□□□ -0.12
PRDM16-207ENST00000512462 HSP90AB3PQ58FF7 597 aa14.29□□□□□ -0.12
PRDM16-207ENST00000512462 LARP1BQ659C4 914 aaKnown RBP14.29□□□□□ -0.12
PRDM16-207ENST00000512462 CNNM1Q9NRU3 951 aa14.29□□□□□ -0.12
PRDM16-207ENST00000512462 ATP8B2P98198 1209 aa14.29□□□□□ -0.12
PRDM16-207ENST00000512462 CAMK4Q16566 473 aa14.29□□□□□ -0.12
PRDM16-207ENST00000512462 FMNL2Q96PY5 1086 aa14.29□□□□□ -0.12
PRDM16-207ENST00000512462 TFIP11Q9UBB9 837 aaKnown RBP14.29□□□□□ -0.12
PRDM16-207ENST00000512462 GLRX3O76003 335 aaKnown RBP14.29□□□□□ -0.12
PRDM16-207ENST00000512462 XRCC6P12956 609 aaKnown RBP eCLIP14.29□□□□□ -0.12
PRDM16-207ENST00000512462 BLOC1S2Q6QNY1 142 aa14.29□□□□□ -0.12
PRDM16-207ENST00000512462 EDC3Q96F86 508 aaKnown RBP14.29□□□□□ -0.12
PRDM16-207ENST00000512462 PIK3R4Q99570 1358 aa14.29□□□□□ -0.12
PRDM16-207ENST00000512462 DLC1Q96QB1 1528 aa14.29□□□□□ -0.12
PRDM16-207ENST00000512462 IQSEC2Q5JU85 1478 aa14.28□□□□□ -0.12
PRDM16-207ENST00000512462 ATP6V1DQ9Y5K8 247 aa14.28□□□□□ -0.12
PRDM16-207ENST00000512462 HAND2P61296 217 aa14.28□□□□□ -0.12
PRDM16-207ENST00000512462 AMOTQ4VCS5 1084 aa14.28□□□□□ -0.12
PRDM16-207ENST00000512462 NFXL1Q6ZNB6 911 aa14.28□□□□□ -0.12
PRDM16-207ENST00000512462 ESYT1Q9BSJ8 1104 aa14.28□□□□□ -0.12
PRDM16-207ENST00000512462 LARP1Q6PKG0 1096 aaKnown RBP14.27□□□□□ -0.12
PRDM16-207ENST00000512462 FAM43AQ8N2R8 423 aa14.27□□□□□ -0.12
PRDM16-207ENST00000512462 PROSER3Q2NL68 480 aa14.27□□□□□ -0.13
PRDM16-207ENST00000512462 CCDC57Q2TAC2 916 aa14.27□□□□□ -0.13
PRDM16-207ENST00000512462 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.27□□□□□ -0.13
PRDM16-207ENST00000512462 MAP3K5Q99683 1374 aa14.27□□□□□ -0.13
PRDM16-207ENST00000512462 PLEKHG3A1L390 1219 aa14.27□□□□□ -0.13
PRDM16-207ENST00000512462 ANKRD13DQ6ZTN6 518 aa14.27□□□□□ -0.13
PRDM16-207ENST00000512462 ECHDC1Q9NTX5 307 aa14.27□□□□□ -0.13
PRDM16-207ENST00000512462 R3HCC1Q9Y3T6 440 aaKnown RBP14.27□□□□□ -0.13
PRDM16-207ENST00000512462 NRXN3Q9Y4C0 1643 aa14.26□□□□□ -0.13
PRDM16-207ENST00000512462 GOLIM4O00461 696 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms