RNA–Protein interactions for RNA: ENST00000509818.5

SEC24D-209, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-209ENST00000509818 LNPKQ9C0E8 428 aa11.32□□□□□ -0.6
SEC24D-209ENST00000509818 DBF4Q9UBU7 674 aaPredicted RBP11.32□□□□□ -0.6
SEC24D-209ENST00000509818 PXDNLA1KZ92 1463 aa11.32□□□□□ -0.6
SEC24D-209ENST00000509818 PKD1L3Q7Z443 1732 aa11.32□□□□□ -0.6
SEC24D-209ENST00000509818 NRAPQ86VF7 1730 aa11.32□□□□□ -0.6
SEC24D-209ENST00000509818 KDM6AO15550 1401 aaPredicted RBP11.32□□□□□ -0.6
SEC24D-209ENST00000509818 CYP27B1O15528 508 aa11.32□□□□□ -0.6
SEC24D-209ENST00000509818 GNAI2P04899 355 aa11.32□□□□□ -0.6
SEC24D-209ENST00000509818 PHAXQ9H814 394 aaKnown RBP11.32□□□□□ -0.6
SEC24D-209ENST00000509818 CHPF2Q9P2E5 772 aa11.32□□□□□ -0.6
SEC24D-209ENST00000509818 ZBTB47Q9UFB7 747 aaPredicted RBP11.32□□□□□ -0.6
SEC24D-209ENST00000509818 COL5A2P05997 1499 aaPredicted RBP11.32□□□□□ -0.6
SEC24D-209ENST00000509818 NWD2Q9ULI1 1742 aa11.31□□□□□ -0.6
SEC24D-209ENST00000509818 ZNF790Q6PG37 636 aa11.31□□□□□ -0.6
SEC24D-209ENST00000509818 NFATC2IPQ8NCF5 419 aa11.31□□□□□ -0.6
SEC24D-209ENST00000509818 ZCRB1Q8TBF4 217 aaKnown RBP11.31□□□□□ -0.6
SEC24D-209ENST00000509818 BTG4Q9NY30 223 aa11.31□□□□□ -0.6
SEC24D-209ENST00000509818 ATP10DQ9P241 1426 aa11.3□□□□□ -0.6
SEC24D-209ENST00000509818 VPS72Q15906 364 aa11.3□□□□□ -0.6
SEC24D-209ENST00000509818 HYPKQ9NX55 129 aa11.3□□□□□ -0.6
SEC24D-209ENST00000509818 PARP4Q9UKK3 1724 aaKnown RBP11.3□□□□□ -0.6
SEC24D-209ENST00000509818 IL2RBP14784 551 aa11.29□□□□□ -0.6
SEC24D-209ENST00000509818 CABP4P57796 275 aa11.29□□□□□ -0.6
SEC24D-209ENST00000509818 SRCIN1Q9C0H9 1055 aa11.29□□□□□ -0.6
SEC24D-209ENST00000509818 PCDH11XQ9BZA7 1347 aa11.29□□□□□ -0.6
SEC24D-209ENST00000509818 PCDH11YQ9BZA8 1340 aa11.29□□□□□ -0.6
SEC24D-209ENST00000509818 SRCAPQ6ZRS2 3230 aa11.29□□□□□ -0.6
SEC24D-209ENST00000509818 COL14A1Q05707 1796 aaKnown RBP11.29□□□□□ -0.6
SEC24D-209ENST00000509818 N4BP2Q86UW6 1770 aaPredicted RBP11.29□□□□□ -0.6
SEC24D-209ENST00000509818 TTC5Q8N0Z6 440 aa11.29□□□□□ -0.6
SEC24D-209ENST00000509818 DNAAF4Q8WXU2 420 aa11.29□□□□□ -0.6
SEC24D-209ENST00000509818 UPF2Q9HAU5 1272 aaKnown RBP11.29□□□□□ -0.6
SEC24D-209ENST00000509818 STRN4Q9NRL3 753 aa11.29□□□□□ -0.6
SEC24D-209ENST00000509818 MRC1P22897 1456 aa11.29□□□□□ -0.6
SEC24D-209ENST00000509818 ATP8B2P98198 1209 aa11.28□□□□□ -0.6
SEC24D-209ENST00000509818 SLC39A6Q13433 755 aa11.28□□□□□ -0.6
SEC24D-209ENST00000509818 BRWD3Q6RI45 1802 aa11.28□□□□□ -0.6
SEC24D-209ENST00000509818 PI4KAP2A4QPH2 592 aa11.27□□□□□ -0.6
SEC24D-209ENST00000509818 UBTFL1P0CB47 393 aaPredicted RBP11.27□□□□□ -0.6
SEC24D-209ENST00000509818 NKX1-1Q15270 411 aaPredicted RBP11.27□□□□□ -0.6
SEC24D-209ENST00000509818 LARP1Q6PKG0 1096 aaKnown RBP11.27□□□□□ -0.6
SEC24D-209ENST00000509818 PI4KAP1Q8N8J0 262 aa11.27□□□□□ -0.6
SEC24D-209ENST00000509818 USP44Q9H0E7 712 aa11.27□□□□□ -0.6
SEC24D-209ENST00000509818 DDX21Q9NR30 783 aaKnown RBP eCLIP11.27□□□□□ -0.6
SEC24D-209ENST00000509818 CCDC9Q9Y3X0 531 aaKnown RBP11.27□□□□□ -0.6
SEC24D-209ENST00000509818 ERVV-2B6SEH9 535 aa11.27□□□□□ -0.61
SEC24D-209ENST00000509818 DDX58O95786 925 aaKnown RBP11.27□□□□□ -0.61
SEC24D-209ENST00000509818 SNRPA1P09661 255 aaKnown RBP11.27□□□□□ -0.61
SEC24D-209ENST00000509818 BMP2KLQ5H9B9 411 aa11.27□□□□□ -0.61
SEC24D-209ENST00000509818 BEND3Q5T5X7 828 aa11.27□□□□□ -0.61
SEC24D-209ENST00000509818 KSR2Q6VAB6 950 aa11.27□□□□□ -0.61
SEC24D-209ENST00000509818 SEPT12Q8IYM1 358 aa11.27□□□□□ -0.61
SEC24D-209ENST00000509818 FMNL2Q96PY5 1086 aa11.27□□□□□ -0.61
SEC24D-209ENST00000509818 USP35Q9P2H5 1018 aa11.27□□□□□ -0.61
SEC24D-209ENST00000509818 ALDH1L1O75891 902 aa11.26□□□□□ -0.61
SEC24D-209ENST00000509818 SEC24BO95487 1268 aa11.26□□□□□ -0.61
SEC24D-209ENST00000509818 HDAC5Q9UQL6 1122 aa11.26□□□□□ -0.61
SEC24D-209ENST00000509818 PRAMEF22A3QJZ6 481 aa11.25□□□□□ -0.61
SEC24D-209ENST00000509818 ONECUT3O60422 494 aaPredicted RBP11.25□□□□□ -0.61
SEC24D-209ENST00000509818 ANXA1P04083 346 aa11.25□□□□□ -0.61
SEC24D-209ENST00000509818 FAM98CQ17RN3 349 aaKnown RBP11.25□□□□□ -0.61
SEC24D-209ENST00000509818 ZNF496Q96IT1 587 aaPredicted RBP11.25□□□□□ -0.61
SEC24D-209ENST00000509818 ADCY9O60503 1353 aa11.25□□□□□ -0.61
SEC24D-209ENST00000509818 MAP3K2Q9Y2U5 619 aa11.25□□□□□ -0.61
SEC24D-209ENST00000509818 LRRFIP2Q9Y608 721 aaKnown RBP11.25□□□□□ -0.61
SEC24D-209ENST00000509818 SPATA31A5Q5VU36 1347 aa11.24□□□□□ -0.61
SEC24D-209ENST00000509818 SPATA31A7Q8IWB4 1347 aa11.24□□□□□ -0.61
SEC24D-209ENST00000509818 PDIA6Q15084 440 aa11.24□□□□□ -0.61
SEC24D-209ENST00000509818 PROSER3Q2NL68 480 aa11.24□□□□□ -0.61
SEC24D-209ENST00000509818 PLEKHM2Q8IWE5 1019 aa11.24□□□□□ -0.61
SEC24D-209ENST00000509818 DDX54Q8TDD1 881 aaKnown RBP11.23□□□□□ -0.61
SEC24D-209ENST00000509818 DAXXQ9UER7 740 aaPredicted RBP11.23□□□□□ -0.61
SEC24D-209ENST00000509818 EIF5BO60841 1220 aaKnown RBP11.23□□□□□ -0.61
SEC24D-209ENST00000509818 C5P01031 1676 aa11.22□□□□□ -0.61
SEC24D-209ENST00000509818 FAM182BQ5T319 152 aa11.22□□□□□ -0.61
SEC24D-209ENST00000509818 LINS1Q8NG48 757 aa11.22□□□□□ -0.61
SEC24D-209ENST00000509818 SSH3Q8TE77 659 aa11.22□□□□□ -0.61
SEC24D-209ENST00000509818 TBC1D32Q96NH3 1257 aa11.22□□□□□ -0.61
SEC24D-209ENST00000509818 USP16Q9Y5T5 823 aa11.22□□□□□ -0.61
SEC24D-209ENST00000509818 SPATA31A1Q5TZJ5 1347 aa11.22□□□□□ -0.61
SEC24D-209ENST00000509818 A0A0G2JS52 829 aa11.21□□□□□ -0.61
SEC24D-209ENST00000509818 PNMA6EA0A0J9YXQ4 647 aa11.21□□□□□ -0.61
SEC24D-209ENST00000509818 APBB1O00213 710 aa11.21□□□□□ -0.61
SEC24D-209ENST00000509818 AIMP1Q12904 312 aaKnown RBP11.21□□□□□ -0.61
SEC24D-209ENST00000509818 RIC3Q7Z5B4 369 aa11.21□□□□□ -0.61
SEC24D-209ENST00000509818 C16orf71Q8IYS4 520 aaPredicted RBP11.21□□□□□ -0.61
SEC24D-209ENST00000509818 LRRCC1Q9C099 1032 aa11.21□□□□□ -0.61
SEC24D-209ENST00000509818 C9orf78Q9NZ63 289 aaPredicted RBP11.21□□□□□ -0.61
SEC24D-209ENST00000509818 THSD7AQ9UPZ6 1657 aa11.21□□□□□ -0.61
SEC24D-209ENST00000509818 IBTKQ9P2D0 1353 aaPredicted RBP11.21□□□□□ -0.61
SEC24D-209ENST00000509818 ERBB4Q15303 1308 aa11.21□□□□□ -0.62
SEC24D-209ENST00000509818 SMARCA5O60264 1052 aaPredicted RBP11.21□□□□□ -0.62
SEC24D-209ENST00000509818 RAB11FIP3O75154 756 aa11.21□□□□□ -0.62
SEC24D-209ENST00000509818 NBPF7P0C2Y1 421 aaPredicted RBP11.21□□□□□ -0.62
SEC24D-209ENST00000509818 MYL6BP14649 208 aa11.21□□□□□ -0.62
SEC24D-209ENST00000509818 NEXNQ0ZGT2 675 aa11.21□□□□□ -0.62
SEC24D-209ENST00000509818 POLA2Q14181 598 aa11.21□□□□□ -0.62
SEC24D-209ENST00000509818 TTC22Q5TAA0 569 aa11.21□□□□□ -0.62
SEC24D-209ENST00000509818 KRT27Q7Z3Y8 459 aa11.21□□□□□ -0.62
SEC24D-209ENST00000509818 MFAP1P55081 439 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms