RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, human

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-216	ENST00000509784	SH3PXD2A	Q5TCZ1	1133 aa		5.36	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	STAG2	Q8N3U4	1231 aa		5.36	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	NBPF15	Q8N660	670 aa		5.36	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	HELQ	Q8TDG4	1101 aa		5.36	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	INSM2	Q96T92	566 aa	Predicted RBP	5.36	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	TSEN34	Q9BSV6	310 aa	Known RBP	5.36	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	HCN4	Q9Y3Q4	1203 aa		5.36	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	EML1	O00423	815 aa		5.35	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	UPP2	O95045	317 aa		5.35	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	NOS2	P35228	1153 aa		5.35	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	RANGAP1	P46060	587 aa	Predicted RBP	5.35	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	TEAD4	Q15561	434 aa		5.35	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	C16orf46	Q6P387	395 aa		5.35	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	PPARGC1B	Q86YN6	1023 aa	Known RBP	5.35	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	ZDHHC1	Q8WTX9	485 aa		5.35	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	L3MBTL2	Q969R5	705 aa		5.35	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	NIFK	Q9BYG3	293 aa	Known RBP	5.35	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	POLM	Q9NP87	494 aa	Predicted RBP	5.35	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	PDZRN3	Q9UPQ7	1066 aa		5.35	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	MPST	P25325	297 aa		5.34	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	RBM25	P49756	843 aa	Known RBP	5.34	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	ECM1	Q16610	540 aa		5.34	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	GNAS	Q5JWF2	1037 aa		5.34	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	COX20	Q5RI15	118 aa		5.34	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	C6orf118	Q5T5N4	469 aa		5.34	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	5.34	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	LINC00528	Q8N1L1	170 aa		5.34	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	RHBDD1	Q8TEB9	315 aa		5.34	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	ZNF428	Q96B54	188 aa		5.34	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	QTRT2	Q9H974	415 aa	Known RBP	5.34	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	FAM187A	A6NFU0	413 aa		5.33	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	SPINT1	O43278	529 aa		5.33	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	FAM13A	O94988	1023 aa		5.33	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	BMP2	P12643	396 aa		5.33	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	MAPK1	P28482	360 aa		5.33	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	CTSO	P43234	321 aa	Predicted RBP	5.33	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	RNF144A	P50876	292 aa	Predicted RBP	5.33	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	ARHGAP4	P98171	946 aa		5.33	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	ALDH16A1	Q8IZ83	802 aa		5.33	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	ZNF295-AS1	Q8N0V1	137 aa		5.33	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	AIDA	Q96BJ3	306 aa		5.33	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	GRIP2	Q9C0E4	1043 aa		5.33	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	LRFN2	Q9ULH4	789 aa		5.33	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	TNFRSF10B	O14763	440 aa		5.32	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	GPC1	P35052	558 aa		5.32	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	PHKA2	P46019	1235 aa		5.32	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	PLA2G4A	P47712	749 aa		5.32	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	HIRA	P54198	1017 aa	Predicted RBP	5.32	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	AAMP	Q13685	434 aa		5.32	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	NOM1	Q5C9Z4	860 aa	Known RBP	5.32	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	PHACTR1	Q9C0D0	580 aa		5.32	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	STIM2	Q9P246	746 aa		5.32	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	ANKRD33B	A6NCL7	494 aa		5.31	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	NPR3	P17342	541 aa		5.31	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	TXLNA	P40222	546 aa		5.31	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	POU4F2	Q12837	409 aa		5.31	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	DGKZ	Q13574	1117 aa		5.31	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	C4orf17	Q53FE4	359 aa		5.31	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	MRPL14	Q6P1L8	145 aa	Known RBP	5.31	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	POTEA	Q6S8J7	498 aa		5.31	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	PRICKLE2	Q7Z3G6	844 aa		5.31	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	MYO19	Q96H55	970 aa		5.31	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	KLK14	Q9P0G3	267 aa		5.31	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	DCTN4	Q9UJW0	460 aa		5.31	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	NISCH	Q9Y2I1	1504 aa		5.31	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	RGS20	O76081	388 aa		5.3	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	BMP1	P13497	986 aa		5.3	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	ERCC3	P19447	782 aa		5.3	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	BRD2	P25440	801 aa	Known RBP	5.3	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	EIF1AX	P47813	144 aa	Known RBP	5.3	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	RTN1	Q16799	776 aa		5.3	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	C11orf91	Q3C1V1	193 aa		5.3	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	FAM26D	Q5JW98	314 aa		5.3	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	AMOTL2	Q9Y2J4	779 aa		5.3	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	FIGNL2	A6NMB9	653 aa		5.29	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	ZBTB39	O15060	712 aa		5.29	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	NDUFB5	O43674	189 aa		5.29	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	SCARF1	Q14162	830 aa		5.29	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	NBPF1	Q3BBV0	1214 aa		5.29	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	C1orf53	Q5VUE5	145 aa		5.29	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	ALKBH2	Q6NS38	261 aa		5.29	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	ATCAY	Q86WG3	371 aa		5.29	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	5.29	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	ABTB2	Q8N961	1025 aa		5.29	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	RNF217	Q8TC41	542 aa		5.29	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	RHPN1	Q8TCX5	695 aa		5.29	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	TMC1	Q8TDI8	760 aa		5.29	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	IFT43	Q96FT9	208 aa		5.29	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	BCL2L13	Q9BXK5	485 aa		5.29	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	CCDC87	Q9NVE4	849 aa		5.29	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	BRPF3	Q9ULD4	1205 aa		5.29	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	TTLL8	A6PVC2	850 aa		5.28	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	SPATA31C2	B4DYI2	1134 aa		5.28	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	FZD6	O60353	706 aa		5.28	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	GFRA3	O60609	400 aa		5.28	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	AVP	P01185	164 aa		5.28	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	RHOQ	P17081	205 aa		5.28	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	PKDCC	Q504Y2	493 aa		5.28	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	NBPF10	Q6P3W6	841 aa	Known RBP	5.28	□□□□□ -1.56
CALCOCO2-216	ENST00000509784	LYSMD3	Q7Z3D4	306 aa		5.28	□□□□□ -1.56

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