RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 TRIM52Q96A61 297 aa6.06□□□□□ -1.44
UBE2D3-226ENST00000508635 SIRT1Q96EB6 747 aa6.06□□□□□ -1.44
UBE2D3-226ENST00000508635 ARHGEF10LQ9HCE6 1279 aa6.06□□□□□ -1.44
UBE2D3-226ENST00000508635 MKRN1Q9UHC7 482 aaKnown RBP6.06□□□□□ -1.44
UBE2D3-226ENST00000508635 SERPINA10Q9UK55 444 aa6.06□□□□□ -1.44
UBE2D3-226ENST00000508635 NOD1Q9Y239 953 aa6.06□□□□□ -1.44
UBE2D3-226ENST00000508635 SYNJ2O15056 1496 aa6.06□□□□□ -1.44
UBE2D3-226ENST00000508635 TOP2BQ02880 1626 aa6.06□□□□□ -1.44
UBE2D3-226ENST00000508635 ABCA5Q8WWZ7 1642 aa6.06□□□□□ -1.44
UBE2D3-226ENST00000508635 SYNJ1O43426 1573 aa6.06□□□□□ -1.44
UBE2D3-226ENST00000508635 A0A1W2PRU2 124 aa6.05□□□□□ -1.44
UBE2D3-226ENST00000508635 GTF2IP78347 998 aa6.05□□□□□ -1.44
UBE2D3-226ENST00000508635 PLEKHM2Q8IWE5 1019 aa6.05□□□□□ -1.44
UBE2D3-226ENST00000508635 INSM2Q96T92 566 aaPredicted RBP6.05□□□□□ -1.44
UBE2D3-226ENST00000508635 POLMQ9NP87 494 aaPredicted RBP6.05□□□□□ -1.44
UBE2D3-226ENST00000508635 BIVM-ERCC5R4GMW8 1640 aa6.05□□□□□ -1.44
UBE2D3-226ENST00000508635 CLASP1Q7Z460 1538 aa6.04□□□□□ -1.44
UBE2D3-226ENST00000508635 FIGNL2A6NMB9 653 aa6.04□□□□□ -1.44
UBE2D3-226ENST00000508635 LZTS3O60299 673 aaPredicted RBP6.04□□□□□ -1.44
UBE2D3-226ENST00000508635 CTSOP43234 321 aaPredicted RBP6.04□□□□□ -1.44
UBE2D3-226ENST00000508635 CLDN10P78369 228 aa6.04□□□□□ -1.44
UBE2D3-226ENST00000508635 CYB5RLQ6IPT4 315 aa6.04□□□□□ -1.44
UBE2D3-226ENST00000508635 PCDHGA11Q9Y5H2 935 aa6.04□□□□□ -1.44
UBE2D3-226ENST00000508635 PBRM1Q86U86 1689 aa6.04□□□□□ -1.44
UBE2D3-226ENST00000508635 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.03□□□□□ -1.44
UBE2D3-226ENST00000508635 SPINT1O43278 529 aa6.03□□□□□ -1.44
UBE2D3-226ENST00000508635 ADAMTS2O95450 1211 aa6.03□□□□□ -1.44
UBE2D3-226ENST00000508635 GNRH1P01148 92 aa6.03□□□□□ -1.44
UBE2D3-226ENST00000508635 RASA1P20936 1047 aa6.03□□□□□ -1.44
UBE2D3-226ENST00000508635 PTSQ03393 145 aa6.03□□□□□ -1.44
UBE2D3-226ENST00000508635 SRSF11Q05519 484 aaKnown RBP6.03□□□□□ -1.44
UBE2D3-226ENST00000508635 KANK4Q5T7N3 995 aaPredicted RBP6.03□□□□□ -1.44
UBE2D3-226ENST00000508635 SV2AQ7L0J3 742 aa6.03□□□□□ -1.44
UBE2D3-226ENST00000508635 OGFOD1Q8N543 542 aa6.03□□□□□ -1.44
UBE2D3-226ENST00000508635 ZNF594Q96JF6 807 aaPredicted RBP6.03□□□□□ -1.44
UBE2D3-226ENST00000508635 NLRP3Q96P20 1036 aa6.03□□□□□ -1.44
UBE2D3-226ENST00000508635 VRTNQ9H8Y1 702 aa6.03□□□□□ -1.44
UBE2D3-226ENST00000508635 ETNK1Q9HBU6 452 aa6.03□□□□□ -1.44
UBE2D3-226ENST00000508635 DNAAF2Q9NVR5 837 aaKnown RBP6.03□□□□□ -1.44
UBE2D3-226ENST00000508635 KIAA1024Q9UPX6 916 aa6.03□□□□□ -1.44
UBE2D3-226ENST00000508635 ARAP1Q96P48 1450 aa6.02□□□□□ -1.44
UBE2D3-226ENST00000508635 TTLL8A6PVC2 850 aa6.02□□□□□ -1.45
UBE2D3-226ENST00000508635 ZBTB7BO15156 539 aaPredicted RBP6.02□□□□□ -1.45
UBE2D3-226ENST00000508635 IL2RAP01589 272 aa6.02□□□□□ -1.45
UBE2D3-226ENST00000508635 GDF10P55107 478 aa6.02□□□□□ -1.45
UBE2D3-226ENST00000508635 LYPD4Q6UWN0 246 aa6.02□□□□□ -1.45
UBE2D3-226ENST00000508635 ALYREFQ86V81 257 aaKnown RBP6.02□□□□□ -1.45
UBE2D3-226ENST00000508635 TRIM50Q86XT4 487 aa6.02□□□□□ -1.45
UBE2D3-226ENST00000508635 CNKSR1Q969H4 720 aa6.02□□□□□ -1.45
UBE2D3-226ENST00000508635 SERTAD1Q9UHV2 236 aa6.02□□□□□ -1.45
UBE2D3-226ENST00000508635 CELA2BP08218 269 aaPredicted RBP6.01□□□□□ -1.45
UBE2D3-226ENST00000508635 ATP1A2P50993 1020 aa6.01□□□□□ -1.45
UBE2D3-226ENST00000508635 SCNN1DP51172 638 aa6.01□□□□□ -1.45
UBE2D3-226ENST00000508635 CRTC2Q53ET0 693 aaPredicted RBP6.01□□□□□ -1.45
UBE2D3-226ENST00000508635 CCDC102BQ68D86 513 aa6.01□□□□□ -1.45
UBE2D3-226ENST00000508635 LARP1Q6PKG0 1096 aaKnown RBP6.01□□□□□ -1.45
UBE2D3-226ENST00000508635 CCDC155Q8N6L0 562 aa6.01□□□□□ -1.45
UBE2D3-226ENST00000508635 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.01□□□□□ -1.45
UBE2D3-226ENST00000508635 TPCN2Q8NHX9 752 aa6.01□□□□□ -1.45
UBE2D3-226ENST00000508635 FHAD1B1AJZ9 1412 aa6□□□□□ -1.45
UBE2D3-226ENST00000508635 ERICH3Q5RHP9 1530 aa6□□□□□ -1.45
UBE2D3-226ENST00000508635 TMEM229AB2RXF0 380 aa6□□□□□ -1.45
UBE2D3-226ENST00000508635 CENPCQ03188 943 aa6□□□□□ -1.45
UBE2D3-226ENST00000508635 CLN3Q13286 438 aa6□□□□□ -1.45
UBE2D3-226ENST00000508635 ESCO1Q5FWF5 840 aa6□□□□□ -1.45
UBE2D3-226ENST00000508635 FOXD4L5Q5VV16 416 aaPredicted RBP6□□□□□ -1.45
UBE2D3-226ENST00000508635 PRICKLE2Q7Z3G6 844 aa6□□□□□ -1.45
UBE2D3-226ENST00000508635 ESYT1Q9BSJ8 1104 aa6□□□□□ -1.45
UBE2D3-226ENST00000508635 GRIN2AQ12879 1464 aa6□□□□□ -1.45
UBE2D3-226ENST00000508635 ADAMTS12P58397 1594 aa6□□□□□ -1.45
UBE2D3-226ENST00000508635 CNTNAP5Q8WYK1 1306 aa5.99□□□□□ -1.45
UBE2D3-226ENST00000508635 NUP160Q12769 1436 aa5.99□□□□□ -1.45
UBE2D3-226ENST00000508635 SFI1A8K8P3 1242 aa5.99□□□□□ -1.45
UBE2D3-226ENST00000508635 USP17L15C9J2P7 530 aa5.99□□□□□ -1.45
UBE2D3-226ENST00000508635 USP17L10C9JJH3 530 aa5.99□□□□□ -1.45
UBE2D3-226ENST00000508635 USP17L13C9JLJ4 530 aa5.99□□□□□ -1.45
UBE2D3-226ENST00000508635 USP17L12C9JPN9 530 aa5.99□□□□□ -1.45
UBE2D3-226ENST00000508635 USP17L11C9JVI0 530 aa5.99□□□□□ -1.45
UBE2D3-226ENST00000508635 USP17L21D6R901 530 aa5.99□□□□□ -1.45
UBE2D3-226ENST00000508635 USP17L18D6R9N7 530 aa5.99□□□□□ -1.45
UBE2D3-226ENST00000508635 USP17L22D6RA61 530 aa5.99□□□□□ -1.45
UBE2D3-226ENST00000508635 USP17L17D6RBQ6 530 aa5.99□□□□□ -1.45
UBE2D3-226ENST00000508635 USP17L19D6RCP7 530 aa5.99□□□□□ -1.45
UBE2D3-226ENST00000508635 USP17L20D6RJB6 530 aa5.99□□□□□ -1.45
UBE2D3-226ENST00000508635 LGR5O75473 907 aa5.99□□□□□ -1.45
UBE2D3-226ENST00000508635 INHAP05111 366 aa5.99□□□□□ -1.45
UBE2D3-226ENST00000508635 USP17L24Q0WX57 530 aa5.99□□□□□ -1.45
UBE2D3-226ENST00000508635 SLC27A3Q5K4L6 730 aa5.99□□□□□ -1.45
UBE2D3-226ENST00000508635 XAGE2Q96GT9 111 aa5.99□□□□□ -1.45
UBE2D3-226ENST00000508635 FURINP09958 794 aa5.98□□□□□ -1.45
UBE2D3-226ENST00000508635 RHOQP17081 205 aa5.98□□□□□ -1.45
UBE2D3-226ENST00000508635 ITGA6P23229 1130 aa5.98□□□□□ -1.45
UBE2D3-226ENST00000508635 DPYDQ12882 1025 aa5.98□□□□□ -1.45
UBE2D3-226ENST00000508635 PTK7Q13308 1070 aa5.98□□□□□ -1.45
UBE2D3-226ENST00000508635 TLR1Q15399 786 aa5.98□□□□□ -1.45
UBE2D3-226ENST00000508635 VWA5B2Q8N398 1253 aa5.98□□□□□ -1.45
UBE2D3-226ENST00000508635 LARGE2Q8N3Y3 721 aa5.98□□□□□ -1.45
UBE2D3-226ENST00000508635 RNF217Q8TC41 542 aa5.98□□□□□ -1.45
UBE2D3-226ENST00000508635 PBXIP1Q96AQ6 731 aa5.98□□□□□ -1.45
UBE2D3-226ENST00000508635 ZNF358Q9NW07 568 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms