RNA–Protein interactions for RNA: ENST00000505486.1

CASP6-205, Transcript of caspase 6, humanhuman

TSL 4 BASIC

Gene CASP6, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6-205ENST00000505486 CICQ96RK0 1608 aaPredicted RBP27.09■■□□□ 1.93
CASP6-205ENST00000505486 RTCBQ9Y3I0 505 aaKnown RBP27.08■■□□□ 1.93
CASP6-205ENST00000505486 BTBD11A6QL63 1104 aa27.07■■□□□ 1.92
CASP6-205ENST00000505486 TRAPPC3LQ5T215 181 aa27.07■■□□□ 1.92
CASP6-205ENST00000505486 RBM42Q9BTD8 480 aaKnown RBP27.07■■□□□ 1.92
CASP6-205ENST00000505486 TRIM35Q9UPQ4 493 aa27.07■■□□□ 1.92
CASP6-205ENST00000505486 TAF7Q15545 349 aaPredicted RBP27.06■■□□□ 1.92
CASP6-205ENST00000505486 TTC5Q8N0Z6 440 aa27.06■■□□□ 1.92
CASP6-205ENST00000505486 THUMPD2Q9BTF0 503 aaKnown RBP27.06■■□□□ 1.92
CASP6-205ENST00000505486 SIPA1L3O60292 1781 aaPredicted RBP27.06■■□□□ 1.92
CASP6-205ENST00000505486 KIAA1551Q9HCM1 1747 aa27.05■■□□□ 1.92
CASP6-205ENST00000505486 A0A0G2JLW4 131 aa27.05■■□□□ 1.92
CASP6-205ENST00000505486 NCBP3Q53F19 620 aaKnown RBP27.05■■□□□ 1.92
CASP6-205ENST00000505486 ARHGEF1Q92888 912 aaKnown RBP27.05■■□□□ 1.92
CASP6-205ENST00000505486 BCS1LQ9Y276 419 aa27.05■■□□□ 1.92
CASP6-205ENST00000505486 C10orf71Q711Q0 1435 aa27.05■■□□□ 1.92
CASP6-205ENST00000505486 TGFB2P61812 414 aa27.04■■□□□ 1.92
CASP6-205ENST00000505486 SLC39A6Q13433 755 aa27.04■■□□□ 1.92
CASP6-205ENST00000505486 ZNF790Q6PG37 636 aa27.03■■□□□ 1.92
CASP6-205ENST00000505486 NLGN1Q8N2Q7 840 aa27.03■■□□□ 1.92
CASP6-205ENST00000505486 PTCD1O75127 700 aaKnown RBP27.02■■□□□ 1.92
CASP6-205ENST00000505486 GYS1P13807 737 aa27.02■■□□□ 1.92
CASP6-205ENST00000505486 KIF13BQ9NQT8 1826 aa27.02■■□□□ 1.92
CASP6-205ENST00000505486 CALD1Q05682 793 aaKnown RBP27.01■■□□□ 1.91
CASP6-205ENST00000505486 CCDC27Q2M243 656 aa27.01■■□□□ 1.91
CASP6-205ENST00000505486 RC3H1Q5TC82 1133 aaKnown RBP27.01■■□□□ 1.91
CASP6-205ENST00000505486 NGEFQ8N5V2 710 aa27.01■■□□□ 1.91
CASP6-205ENST00000505486 N4BP2Q86UW6 1770 aaPredicted RBP27.01■■□□□ 1.91
CASP6-205ENST00000505486 CNTNAP4Q9C0A0 1308 aa27■■□□□ 1.91
CASP6-205ENST00000505486 DPEP1P16444 411 aa27■■□□□ 1.91
CASP6-205ENST00000505486 ADRA2BP18089 450 aa27■■□□□ 1.91
CASP6-205ENST00000505486 RPS6KA4O75676 772 aa26.99■■□□□ 1.91
CASP6-205ENST00000505486 BABAM1Q9NWV8 329 aa26.99■■□□□ 1.91
CASP6-205ENST00000505486 KCPQ6ZWJ8 1503 aa26.99■■□□□ 1.91
CASP6-205ENST00000505486 ZNF831Q5JPB2 1677 aa26.98■■□□□ 1.91
CASP6-205ENST00000505486 RFC4P35249 363 aa26.98■■□□□ 1.91
CASP6-205ENST00000505486 ARHGAP27Q6ZUM4 889 aa26.98■■□□□ 1.91
CASP6-205ENST00000505486 CCDC87Q9NVE4 849 aa26.98■■□□□ 1.91
CASP6-205ENST00000505486 C4AP0C0L4 1744 aa26.97■■□□□ 1.91
CASP6-205ENST00000505486 COL5A3P25940 1745 aaPredicted RBP26.97■■□□□ 1.91
CASP6-205ENST00000505486 VSIG10Q8N0Z9 540 aa26.97■■□□□ 1.91
CASP6-205ENST00000505486 FMNL2Q96PY5 1086 aa26.97■■□□□ 1.91
CASP6-205ENST00000505486 MIS18AQ9NYP9 233 aa26.96■■□□□ 1.91
CASP6-205ENST00000505486 PARP3Q9Y6F1 533 aa26.96■■□□□ 1.91
CASP6-205ENST00000505486 UBR2Q8IWV8 1755 aa26.96■■□□□ 1.91
CASP6-205ENST00000505486 ZNF496Q96IT1 587 aaPredicted RBP26.95■■□□□ 1.9
CASP6-205ENST00000505486 TSPYL4Q9UJ04 414 aa26.95■■□□□ 1.9
CASP6-205ENST00000505486 WWC1Q8IX03 1113 aa26.94■■□□□ 1.9
CASP6-205ENST00000505486 NMRK2Q9NPI5 230 aa26.94■■□□□ 1.9
CASP6-205ENST00000505486 KCNQ3O43525 872 aa26.93■■□□□ 1.9
CASP6-205ENST00000505486 KCNA3P22001 575 aa26.93■■□□□ 1.9
CASP6-205ENST00000505486 SRP68Q9UHB9 627 aaKnown RBP26.93■■□□□ 1.9
CASP6-205ENST00000505486 HEG1Q9ULI3 1381 aa26.93■■□□□ 1.9
CASP6-205ENST00000505486 SALL2Q9Y467 1007 aaPredicted RBP26.92■■□□□ 1.9
CASP6-205ENST00000505486 LAS1LQ9Y4W2 734 aaKnown RBP26.92■■□□□ 1.9
CASP6-205ENST00000505486 CHL1O00533 1208 aa26.91■■□□□ 1.9
CASP6-205ENST00000505486 TOMM70O94826 608 aa26.91■■□□□ 1.9
CASP6-205ENST00000505486 CRKLP46109 303 aaKnown RBP26.91■■□□□ 1.9
CASP6-205ENST00000505486 CFAP44Q96MT7 982 aa26.91■■□□□ 1.9
CASP6-205ENST00000505486 TEX13AQ9BXU3 409 aaPredicted RBP26.91■■□□□ 1.9
CASP6-205ENST00000505486 IFT57Q9NWB7 429 aa26.91■■□□□ 1.9
CASP6-205ENST00000505486 KDM3BQ7LBC6 1761 aa26.91■■□□□ 1.9
CASP6-205ENST00000505486 APLP1P51693 650 aa26.9■■□□□ 1.9
CASP6-205ENST00000505486 GNAI1P63096 354 aa26.9■■□□□ 1.9
CASP6-205ENST00000505486 MYH14Q7Z406 1995 aaKnown RBP26.89■■□□□ 1.9
CASP6-205ENST00000505486 FKBP8Q14318 412 aa26.89■■□□□ 1.9
CASP6-205ENST00000505486 C9orf131Q5VYM1 1079 aa26.89■■□□□ 1.9
CASP6-205ENST00000505486 DNAJC10Q8IXB1 793 aa26.89■■□□□ 1.9
CASP6-205ENST00000505486 TJP1Q07157 1748 aa26.89■■□□□ 1.9
CASP6-205ENST00000505486 DDR1Q08345 913 aa26.88■■□□□ 1.89
CASP6-205ENST00000505486 WDR63Q8IWG1 891 aa26.88■■□□□ 1.89
CASP6-205ENST00000505486 IL16Q14005 1332 aa26.88■■□□□ 1.89
CASP6-205ENST00000505486 USP42Q9H9J4 1324 aaKnown RBP26.88■■□□□ 1.89
CASP6-205ENST00000505486 SNRPA1P09661 255 aaKnown RBP26.87■■□□□ 1.89
CASP6-205ENST00000505486 ZNF853P0CG23 659 aa26.87■■□□□ 1.89
CASP6-205ENST00000505486 EIF4A1P60842 406 aaKnown RBP26.87■■□□□ 1.89
CASP6-205ENST00000505486 STARD3NLO95772 234 aa26.86■■□□□ 1.89
CASP6-205ENST00000505486 BRCA1P38398 1863 aaKnown RBP26.86■■□□□ 1.89
CASP6-205ENST00000505486 DNAJC5GQ8N7S2 189 aa26.86■■□□□ 1.89
CASP6-205ENST00000505486 PIM2Q9P1W9 311 aa26.86■■□□□ 1.89
CASP6-205ENST00000505486 CYP19A1P11511 503 aaPredicted RBP26.85■■□□□ 1.89
CASP6-205ENST00000505486 CHRNA5P30532 468 aa26.83■■□□□ 1.89
CASP6-205ENST00000505486 INTS5Q6P9B9 1019 aaKnown RBP26.83■■□□□ 1.89
CASP6-205ENST00000505486 MBIPQ9NS73 344 aa26.83■■□□□ 1.89
CASP6-205ENST00000505486 DALRD3Q5D0E6 543 aaKnown RBP26.82■■□□□ 1.88
CASP6-205ENST00000505486 POLRMTO00411 1230 aaKnown RBP26.8■■□□□ 1.88
CASP6-205ENST00000505486 ZNF521Q96K83 1311 aa26.8■■□□□ 1.88
CASP6-205ENST00000505486 HTRA3P83110 453 aa26.79■■□□□ 1.88
CASP6-205ENST00000505486 RBM46Q8TBY0 533 aaKnown RBP26.79■■□□□ 1.88
CASP6-205ENST00000505486 RNF181Q9P0P0 153 aa26.79■■□□□ 1.88
CASP6-205ENST00000505486 USP16Q9Y5T5 823 aa26.79■■□□□ 1.88
CASP6-205ENST00000505486 ARFGEF1Q9Y6D6 1849 aa26.79■■□□□ 1.88
CASP6-205ENST00000505486 PRAMEF22A3QJZ6 481 aa26.78■■□□□ 1.88
CASP6-205ENST00000505486 TM4SF1P30408 202 aa26.78■■□□□ 1.88
CASP6-205ENST00000505486 USPL1Q5W0Q7 1092 aa26.78■■□□□ 1.88
CASP6-205ENST00000505486 C16orf71Q8IYS4 520 aaPredicted RBP26.77■■□□□ 1.88
CASP6-205ENST00000505486 MYH16Q9H6N6 1097 aa26.76■■□□□ 1.87
CASP6-205ENST00000505486 SOS1Q07889 1333 aaPredicted RBP26.75■■□□□ 1.87
CASP6-205ENST00000505486 ZBTB1Q9Y2K1 713 aa26.75■■□□□ 1.87
CASP6-205ENST00000505486 LAMB4A4D0S4 1761 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms