RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 POTEBQ6S5H4 581 aa10.88□□□□□ -0.67
RFC1-207ENST00000504554 MS4A4AQ96JQ5 239 aa10.88□□□□□ -0.67
RFC1-207ENST00000504554 TOGARAM1Q9Y4F4 1720 aa10.88□□□□□ -0.67
RFC1-207ENST00000504554 SULT6B1Q6IMI4 303 aa10.87□□□□□ -0.67
RFC1-207ENST00000504554 SPG7Q9UQ90 795 aa10.87□□□□□ -0.67
RFC1-207ENST00000504554 PAPPAQ13219 1627 aa10.87□□□□□ -0.67
RFC1-207ENST00000504554 COL3A1P02461 1466 aaPredicted RBP10.87□□□□□ -0.67
RFC1-207ENST00000504554 STK25O00506 426 aa10.86□□□□□ -0.67
RFC1-207ENST00000504554 SLC15A2Q16348 729 aa10.86□□□□□ -0.67
RFC1-207ENST00000504554 MICALL2Q8IY33 904 aa10.86□□□□□ -0.67
RFC1-207ENST00000504554 PIGBQ92521 554 aa10.86□□□□□ -0.67
RFC1-207ENST00000504554 HS3ST6Q96QI5 342 aa10.86□□□□□ -0.67
RFC1-207ENST00000504554 KDRP35968 1356 aa10.86□□□□□ -0.67
RFC1-207ENST00000504554 FAM205CA6NFA0 338 aa10.85□□□□□ -0.67
RFC1-207ENST00000504554 MPRIPQ6WCQ1 1025 aa10.85□□□□□ -0.67
RFC1-207ENST00000504554 SPNS2Q8IVW8 549 aa10.85□□□□□ -0.67
RFC1-207ENST00000504554 IFNL2Q8IZJ0 200 aa10.85□□□□□ -0.67
RFC1-207ENST00000504554 LRP5O75197 1615 aa10.84□□□□□ -0.67
RFC1-207ENST00000504554 HMOX1P09601 288 aa10.84□□□□□ -0.67
RFC1-207ENST00000504554 TMEM92Q6UXU6 159 aa10.84□□□□□ -0.67
RFC1-207ENST00000504554 STK32BQ9NY57 414 aa10.84□□□□□ -0.67
RFC1-207ENST00000504554 KDM6AO15550 1401 aaPredicted RBP10.84□□□□□ -0.67
RFC1-207ENST00000504554 CASZ1Q86V15 1759 aa10.83□□□□□ -0.68
RFC1-207ENST00000504554 DIAPH1O60610 1272 aaKnown RBP10.83□□□□□ -0.68
RFC1-207ENST00000504554 ZBTB7AO95365 584 aa10.83□□□□□ -0.68
RFC1-207ENST00000504554 PPP2R1AP30153 589 aa10.83□□□□□ -0.68
RFC1-207ENST00000504554 PLEKHO1Q53GL0 409 aaPredicted RBP10.83□□□□□ -0.68
RFC1-207ENST00000504554 SLC27A3Q5K4L6 730 aa10.83□□□□□ -0.68
RFC1-207ENST00000504554 ZNF530Q6P9A1 599 aaPredicted RBP10.83□□□□□ -0.68
RFC1-207ENST00000504554 PALLDQ8WX93 1383 aa10.82□□□□□ -0.68
RFC1-207ENST00000504554 PLEKHG2Q9H7P9 1386 aa10.82□□□□□ -0.68
RFC1-207ENST00000504554 MMRN1Q13201 1228 aa10.82□□□□□ -0.68
RFC1-207ENST00000504554 CCNL1Q9UK58 526 aaPredicted RBP10.82□□□□□ -0.68
RFC1-207ENST00000504554 ASAP1Q9ULH1 1129 aa10.82□□□□□ -0.68
RFC1-207ENST00000504554 LY75O60449 1722 aa10.81□□□□□ -0.68
RFC1-207ENST00000504554 AMOTQ4VCS5 1084 aa10.81□□□□□ -0.68
RFC1-207ENST00000504554 SMIM5Q71RC9 77 aa10.81□□□□□ -0.68
RFC1-207ENST00000504554 AMIGO3Q86WK7 504 aa10.81□□□□□ -0.68
RFC1-207ENST00000504554 KRTAP3-3Q9BYR6 98 aa10.81□□□□□ -0.68
RFC1-207ENST00000504554 KRTAP3-2Q9BYR7 98 aa10.81□□□□□ -0.68
RFC1-207ENST00000504554 ATG3Q9NT62 314 aa10.81□□□□□ -0.68
RFC1-207ENST00000504554 PNPLA7Q6ZV29 1317 aa10.81□□□□□ -0.68
RFC1-207ENST00000504554 HOXB1P14653 301 aaPredicted RBP10.8□□□□□ -0.68
RFC1-207ENST00000504554 PTGER2P43116 358 aa10.8□□□□□ -0.68
RFC1-207ENST00000504554 MTHFSDQ2M296 383 aaKnown RBP10.8□□□□□ -0.68
RFC1-207ENST00000504554 SLC4A9Q96Q91 983 aa10.8□□□□□ -0.68
RFC1-207ENST00000504554 LGR6Q9HBX8 967 aa10.8□□□□□ -0.68
RFC1-207ENST00000504554 TMOD3Q9NYL9 352 aa10.8□□□□□ -0.68
RFC1-207ENST00000504554 ITGB4P16144 1822 aa10.79□□□□□ -0.68
RFC1-207ENST00000504554 U2SURPO15042 1029 aaKnown RBP10.79□□□□□ -0.68
RFC1-207ENST00000504554 DDX10Q13206 875 aaKnown RBP10.79□□□□□ -0.68
RFC1-207ENST00000504554 ITPK1Q13572 414 aa10.79□□□□□ -0.68
RFC1-207ENST00000504554 DOK7Q18PE1 504 aa10.79□□□□□ -0.68
RFC1-207ENST00000504554 ZNF710Q8N1W2 664 aa10.79□□□□□ -0.68
RFC1-207ENST00000504554 DCAF5Q96JK2 942 aa10.79□□□□□ -0.68
RFC1-207ENST00000504554 SPON1Q9HCB6 807 aa10.79□□□□□ -0.68
RFC1-207ENST00000504554 RYDENQ9NUL5 291 aaKnown RBP10.79□□□□□ -0.68
RFC1-207ENST00000504554 STK24Q9Y6E0 443 aa10.79□□□□□ -0.68
RFC1-207ENST00000504554 KAT6BQ8WYB5 2073 aa10.78□□□□□ -0.68
RFC1-207ENST00000504554 ERVV-2B6SEH9 535 aa10.78□□□□□ -0.68
RFC1-207ENST00000504554 LINC00116Q8NCU8 138 aa10.78□□□□□ -0.68
RFC1-207ENST00000504554 LOC102724428A0A0B4J2F2 783 aa10.77□□□□□ -0.69
RFC1-207ENST00000504554 HSP90AB1P08238 724 aaKnown RBP10.77□□□□□ -0.69
RFC1-207ENST00000504554 SIK1P57059 783 aa10.77□□□□□ -0.69
RFC1-207ENST00000504554 AKAP4Q5JQC9 854 aa10.77□□□□□ -0.69
RFC1-207ENST00000504554 C1orf141Q5JVX7 400 aa10.77□□□□□ -0.69
RFC1-207ENST00000504554 COL23A1Q86Y22 540 aaPredicted RBP10.77□□□□□ -0.69
RFC1-207ENST00000504554 NFATC2IPQ8NCF5 419 aa10.77□□□□□ -0.69
RFC1-207ENST00000504554 SMARCC1Q92922 1105 aaPredicted RBP10.77□□□□□ -0.69
RFC1-207ENST00000504554 PHACTR3Q96KR7 559 aa10.77□□□□□ -0.69
RFC1-207ENST00000504554 RSPH6AQ9H0K4 717 aa10.77□□□□□ -0.69
RFC1-207ENST00000504554 TFCP2L1Q9NZI6 479 aa10.77□□□□□ -0.69
RFC1-207ENST00000504554 RNMTO43148 476 aaKnown RBP10.76□□□□□ -0.69
RFC1-207ENST00000504554 PRKCSHP14314 528 aaPredicted RBP10.76□□□□□ -0.69
RFC1-207ENST00000504554 CABP4P57796 275 aa10.76□□□□□ -0.69
RFC1-207ENST00000504554 FBXO22Q8NEZ5 403 aa10.76□□□□□ -0.69
RFC1-207ENST00000504554 MTFR1LQ9H019 292 aa10.76□□□□□ -0.69
RFC1-207ENST00000504554 TUBGCP6Q96RT7 1819 aa10.76□□□□□ -0.69
RFC1-207ENST00000504554 UTRNP46939 3433 aa10.76□□□□□ -0.69
RFC1-207ENST00000504554 PRKAR2BP31323 418 aa10.75□□□□□ -0.69
RFC1-207ENST00000504554 C5P01031 1676 aa10.74□□□□□ -0.69
RFC1-207ENST00000504554 ATP6V1AP38606 617 aa10.74□□□□□ -0.69
RFC1-207ENST00000504554 IL17REQ8NFR9 667 aa10.74□□□□□ -0.69
RFC1-207ENST00000504554 CFAP53Q96M91 514 aa10.74□□□□□ -0.69
RFC1-207ENST00000504554 SLC52A2Q9HAB3 445 aa10.74□□□□□ -0.69
RFC1-207ENST00000504554 C4BP0C0L5 1744 aa10.73□□□□□ -0.69
RFC1-207ENST00000504554 U2AF1L5P0DN76 240 aaPredicted RBP10.73□□□□□ -0.69
RFC1-207ENST00000504554 U2AF1Q01081 240 aaKnown RBP eCLIP10.73□□□□□ -0.69
RFC1-207ENST00000504554 SLC39A6Q13433 755 aa10.73□□□□□ -0.69
RFC1-207ENST00000504554 MSL1Q68DK7 614 aa10.73□□□□□ -0.69
RFC1-207ENST00000504554 MRC1P22897 1456 aa10.73□□□□□ -0.69
RFC1-207ENST00000504554 PTCD1O75127 700 aaKnown RBP10.72□□□□□ -0.69
RFC1-207ENST00000504554 PHF14O94880 888 aa10.72□□□□□ -0.69
RFC1-207ENST00000504554 MFRPQ9BY79 579 aa10.72□□□□□ -0.69
RFC1-207ENST00000504554 PPP1R1BQ9UD71 204 aaPredicted RBP10.72□□□□□ -0.69
RFC1-207ENST00000504554 ADAMTS7Q9UKP4 1686 aa10.72□□□□□ -0.69
RFC1-207ENST00000504554 QSER1Q2KHR3 1735 aa10.72□□□□□ -0.69
RFC1-207ENST00000504554 TAF1LQ8IZX4 1826 aa10.72□□□□□ -0.69
RFC1-207ENST00000504554 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.71□□□□□ -0.69
RFC1-207ENST00000504554 RIMBP2O15034 1052 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms