RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 ELOA3CA0A087WX78 387 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P17-201ENST00000504195 ELOA3DA6NLF2 546 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P17-201ENST00000504195 ATXN7O15265 892 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P17-201ENST00000504195 GNRH1P01148 92 aa5.93□□□□□ -1.46
HMGB3P17-201ENST00000504195 ELOA3BQ3SY89 546 aa5.93□□□□□ -1.46
HMGB3P17-201ENST00000504195 ZNF468Q5VIY5 522 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P17-201ENST00000504195 TXNRD3Q86VQ6 643 aa5.93□□□□□ -1.46
HMGB3P17-201ENST00000504195 ELOA3Q8NG57 546 aa5.93□□□□□ -1.46
HMGB3P17-201ENST00000504195 ZCCHC2Q9C0B9 1178 aaKnown RBP5.93□□□□□ -1.46
HMGB3P17-201ENST00000504195 ADGRE1Q14246 886 aa5.92□□□□□ -1.46
HMGB3P17-201ENST00000504195 MBTPS1Q14703 1052 aa5.92□□□□□ -1.46
HMGB3P17-201ENST00000504195 TBC1D9Q6ZT07 1266 aa5.92□□□□□ -1.46
HMGB3P17-201ENST00000504195 M0R082 166 aa5.91□□□□□ -1.46
HMGB3P17-201ENST00000504195 KHNYNO15037 678 aaKnown RBP5.91□□□□□ -1.46
HMGB3P17-201ENST00000504195 MAPTP10636 758 aaKnown RBP5.91□□□□□ -1.46
HMGB3P17-201ENST00000504195 SCTRP47872 440 aa5.91□□□□□ -1.46
HMGB3P17-201ENST00000504195 NRG1Q02297 640 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P17-201ENST00000504195 NLRP8Q86W28 1048 aa5.91□□□□□ -1.46
HMGB3P17-201ENST00000504195 ZNF417Q8TAU3 575 aa5.91□□□□□ -1.46
HMGB3P17-201ENST00000504195 ZNF587Q96SQ5 575 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P17-201ENST00000504195 OSBPL3Q9H4L5 887 aa5.91□□□□□ -1.46
HMGB3P17-201ENST00000504195 PCDHB11Q9Y5F2 797 aa5.91□□□□□ -1.46
HMGB3P17-201ENST00000504195 TRAK2O60296 914 aa5.9□□□□□ -1.46
HMGB3P17-201ENST00000504195 IL2RAP01589 272 aa5.9□□□□□ -1.46
HMGB3P17-201ENST00000504195 RHBDD1Q8TEB9 315 aa5.9□□□□□ -1.46
HMGB3P17-201ENST00000504195 TAL1P17542 331 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P17-201ENST00000504195 PDE4DQ08499 809 aa5.89□□□□□ -1.47
HMGB3P17-201ENST00000504195 DNAAF2Q9NVR5 837 aaKnown RBP5.89□□□□□ -1.47
HMGB3P17-201ENST00000504195 POLR3EQ9NVU0 708 aa5.89□□□□□ -1.47
HMGB3P17-201ENST00000504195 PLA2G4AP47712 749 aa5.88□□□□□ -1.47
HMGB3P17-201ENST00000504195 TNP2Q05952 138 aa5.88□□□□□ -1.47
HMGB3P17-201ENST00000504195 ATP1B4Q9UN42 357 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P17-201ENST00000504195 ESCO1Q5FWF5 840 aa5.87□□□□□ -1.47
HMGB3P17-201ENST00000504195 TRAPPC3LQ5T215 181 aa5.87□□□□□ -1.47
HMGB3P17-201ENST00000504195 C1orf216Q8TAB5 229 aa5.87□□□□□ -1.47
HMGB3P17-201ENST00000504195 EPS8L1Q8TE68 723 aa5.87□□□□□ -1.47
HMGB3P17-201ENST00000504195 ZNF592Q92610 1267 aa5.87□□□□□ -1.47
HMGB3P17-201ENST00000504195 FHDC1Q9C0D6 1143 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P17-201ENST00000504195 PRDM6Q9NQX0 595 aa5.87□□□□□ -1.47
HMGB3P17-201ENST00000504195 AP1G2O75843 785 aa5.86□□□□□ -1.47
HMGB3P17-201ENST00000504195 MYCP01106 439 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P17-201ENST00000504195 MCCD1P59942 119 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P17-201ENST00000504195 USP21Q9UK80 565 aa5.86□□□□□ -1.47
HMGB3P17-201ENST00000504195 GJA3Q9Y6H8 435 aa5.86□□□□□ -1.47
HMGB3P17-201ENST00000504195 SELPP16109 830 aa5.85□□□□□ -1.47
HMGB3P17-201ENST00000504195 SSTR4P31391 388 aa5.85□□□□□ -1.47
HMGB3P17-201ENST00000504195 RAC1P63000 192 aa5.85□□□□□ -1.47
HMGB3P17-201ENST00000504195 SKIV2LQ15477 1246 aaKnown RBP5.85□□□□□ -1.47
HMGB3P17-201ENST00000504195 ARSJQ5FYB0 599 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P17-201ENST00000504195 SYT9Q86SS6 491 aa5.85□□□□□ -1.47
HMGB3P17-201ENST00000504195 AIDAQ96BJ3 306 aa5.85□□□□□ -1.47
HMGB3P17-201ENST00000504195 MARK1Q9P0L2 795 aa5.85□□□□□ -1.47
HMGB3P17-201ENST00000504195 ZBBXA8MT70 800 aa5.84□□□□□ -1.47
HMGB3P17-201ENST00000504195 TLR1Q15399 786 aa5.84□□□□□ -1.47
HMGB3P17-201ENST00000504195 LENG1Q96BZ8 264 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P17-201ENST00000504195 XAGE2Q96GT9 111 aa5.84□□□□□ -1.47
HMGB3P17-201ENST00000504195 HRH3Q9Y5N1 445 aa5.84□□□□□ -1.47
HMGB3P17-201ENST00000504195 A0A1W2PNR3 127 aa5.83□□□□□ -1.48
HMGB3P17-201ENST00000504195 ALBP02768 609 aa5.83□□□□□ -1.48
HMGB3P17-201ENST00000504195 FAM157BP0CG42 384 aa5.83□□□□□ -1.48
HMGB3P17-201ENST00000504195 NID1P14543 1247 aa5.83□□□□□ -1.48
HMGB3P17-201ENST00000504195 ATP4AP20648 1035 aa5.83□□□□□ -1.48
HMGB3P17-201ENST00000504195 JAG1P78504 1218 aa5.83□□□□□ -1.48
HMGB3P17-201ENST00000504195 C8orf86Q6ZUL3 223 aa5.83□□□□□ -1.48
HMGB3P17-201ENST00000504195 PPARGC1BQ86YN6 1023 aaKnown RBP5.83□□□□□ -1.48
HMGB3P17-201ENST00000504195 MICALL1Q8N3F8 863 aa5.83□□□□□ -1.48
HMGB3P17-201ENST00000504195 COL9A3Q14050 684 aaPredicted RBP5.82□□□□□ -1.48
HMGB3P17-201ENST00000504195 NBPF1Q3BBV0 1214 aa5.82□□□□□ -1.48
HMGB3P17-201ENST00000504195 A0A0A0MRY4 1105 aa5.81□□□□□ -1.48
HMGB3P17-201ENST00000504195 ADARB2-AS1A8MUL3 147 aa5.81□□□□□ -1.48
HMGB3P17-201ENST00000504195 SIN3BO75182 1162 aa5.81□□□□□ -1.48
HMGB3P17-201ENST00000504195 TATP17735 454 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P17-201ENST00000504195 SHISA2Q6UWI4 295 aa5.81□□□□□ -1.48
HMGB3P17-201ENST00000504195 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.81□□□□□ -1.48
HMGB3P17-201ENST00000504195 HMX1Q9NP08 348 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P17-201ENST00000504195 LILRB5O75023 590 aa5.8□□□□□ -1.48
HMGB3P17-201ENST00000504195 USP17L8P0C7I0 530 aa5.8□□□□□ -1.48
HMGB3P17-201ENST00000504195 GP2P55259 537 aaKnown RBP5.8□□□□□ -1.48
HMGB3P17-201ENST00000504195 SH3D19Q5HYK7 790 aa5.8□□□□□ -1.48
HMGB3P17-201ENST00000504195 SSBP4Q9BWG4 385 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P17-201ENST00000504195 HCN2Q9UL51 889 aa5.8□□□□□ -1.48
HMGB3P17-201ENST00000504195 OAS3Q9Y6K5 1087 aaKnown RBP5.8□□□□□ -1.48
HMGB3P17-201ENST00000504195 CD97P48960 835 aa5.79□□□□□ -1.48
HMGB3P17-201ENST00000504195 NIFKQ9BYG3 293 aaKnown RBP5.79□□□□□ -1.48
HMGB3P17-201ENST00000504195 KRTAP4-11Q9BYQ6 195 aa5.79□□□□□ -1.48
HMGB3P17-201ENST00000504195 ZNF330Q9Y3S2 320 aaPredicted RBP5.79□□□□□ -1.48
HMGB3P17-201ENST00000504195 FBXO45P0C2W1 286 aa5.78□□□□□ -1.48
HMGB3P17-201ENST00000504195 ADH7P40394 386 aa5.78□□□□□ -1.48
HMGB3P17-201ENST00000504195 NEUROD1Q13562 356 aa5.78□□□□□ -1.48
HMGB3P17-201ENST00000504195 TNFRSF25Q93038 417 aa5.78□□□□□ -1.48
HMGB3P17-201ENST00000504195 MDFIQ99750 246 aa5.78□□□□□ -1.48
HMGB3P17-201ENST00000504195 STARD13Q9Y3M8 1113 aa5.78□□□□□ -1.48
HMGB3P17-201ENST00000504195 SAMD5Q5TGI4 173 aa5.77□□□□□ -1.49
HMGB3P17-201ENST00000504195 SLC51AQ86UW1 340 aa5.77□□□□□ -1.49
HMGB3P17-201ENST00000504195 STRN4Q9NRL3 753 aa5.77□□□□□ -1.49
HMGB3P17-201ENST00000504195 BICDL1Q6ZP65 573 aa5.76□□□□□ -1.49
HMGB3P17-201ENST00000504195 PRR23CQ6ZRP0 262 aa5.76□□□□□ -1.49
HMGB3P17-201ENST00000504195 EFSO43281 561 aa5.75□□□□□ -1.49
HMGB3P17-201ENST00000504195 PTCD1O75127 700 aaKnown RBP5.75□□□□□ -1.49
HMGB3P17-201ENST00000504195 FSTP19883 344 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms