RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 FZD6O60353 706 aa8.52□□□□□ -1.05
HMGB1P3-201ENST00000502802 P4HBP07237 508 aaKnown RBP8.52□□□□□ -1.05
HMGB1P3-201ENST00000502802 CLN3Q13286 438 aa8.52□□□□□ -1.05
HMGB1P3-201ENST00000502802 NNTQ13423 1086 aa8.52□□□□□ -1.05
HMGB1P3-201ENST00000502802 CCDC87Q9NVE4 849 aa8.52□□□□□ -1.05
HMGB1P3-201ENST00000502802 SERTM1A2A2V5 107 aa8.51□□□□□ -1.05
HMGB1P3-201ENST00000502802 ALDH1A1P00352 501 aa8.51□□□□□ -1.05
HMGB1P3-201ENST00000502802 BRD2P25440 801 aaKnown RBP8.51□□□□□ -1.05
HMGB1P3-201ENST00000502802 NOS2P35228 1153 aa8.51□□□□□ -1.05
HMGB1P3-201ENST00000502802 HIRAP54198 1017 aaPredicted RBP8.51□□□□□ -1.05
HMGB1P3-201ENST00000502802 TEAD4Q15561 434 aa8.51□□□□□ -1.05
HMGB1P3-201ENST00000502802 KDF1Q8NAX2 398 aaPredicted RBP8.51□□□□□ -1.05
HMGB1P3-201ENST00000502802 NGLY1Q96IV0 654 aa8.51□□□□□ -1.05
HMGB1P3-201ENST00000502802 DMRTB1Q96MA1 342 aa8.51□□□□□ -1.05
HMGB1P3-201ENST00000502802 WASF2Q9Y6W5 498 aa8.51□□□□□ -1.05
HMGB1P3-201ENST00000502802 EML1O00423 815 aa8.5□□□□□ -1.05
HMGB1P3-201ENST00000502802 PTGIRP43119 386 aa8.5□□□□□ -1.05
HMGB1P3-201ENST00000502802 PLCB3Q01970 1234 aa8.5□□□□□ -1.05
HMGB1P3-201ENST00000502802 CENPCQ03188 943 aa8.5□□□□□ -1.05
HMGB1P3-201ENST00000502802 FMR1Q06787 632 aaKnown RBP eCLIP8.5□□□□□ -1.05
HMGB1P3-201ENST00000502802 CBLBQ13191 982 aa8.5□□□□□ -1.05
HMGB1P3-201ENST00000502802 SPRYD7Q5W111 196 aa8.5□□□□□ -1.05
HMGB1P3-201ENST00000502802 Q6ZVU0 165 aa8.5□□□□□ -1.05
HMGB1P3-201ENST00000502802 PRKD2Q9BZL6 878 aa8.5□□□□□ -1.05
HMGB1P3-201ENST00000502802 FHDC1Q9C0D6 1143 aaPredicted RBP8.5□□□□□ -1.05
HMGB1P3-201ENST00000502802 CABP1Q9NZU7 370 aa8.5□□□□□ -1.05
HMGB1P3-201ENST00000502802 FGD1P98174 961 aa8.49□□□□□ -1.05
HMGB1P3-201ENST00000502802 PDE3BQ13370 1112 aa8.49□□□□□ -1.05
HMGB1P3-201ENST00000502802 DSC3Q14574 896 aa8.49□□□□□ -1.05
HMGB1P3-201ENST00000502802 C11orf91Q3C1V1 193 aa8.49□□□□□ -1.05
HMGB1P3-201ENST00000502802 ZDHHC1Q8WTX9 485 aa8.49□□□□□ -1.05
HMGB1P3-201ENST00000502802 FAM129BQ96TA1 746 aa8.49□□□□□ -1.05
HMGB1P3-201ENST00000502802 ZNF232Q9UNY5 417 aa8.49□□□□□ -1.05
HMGB1P3-201ENST00000502802 RECKO95980 971 aa8.48□□□□□ -1.05
HMGB1P3-201ENST00000502802 RTN1Q16799 776 aa8.48□□□□□ -1.05
HMGB1P3-201ENST00000502802 SH3PXD2AQ5TCZ1 1133 aa8.48□□□□□ -1.05
HMGB1P3-201ENST00000502802 ALDH16A1Q8IZ83 802 aa8.48□□□□□ -1.05
HMGB1P3-201ENST00000502802 L3MBTL2Q969R5 705 aa8.48□□□□□ -1.05
HMGB1P3-201ENST00000502802 NLRP3Q96P20 1036 aa8.48□□□□□ -1.05
HMGB1P3-201ENST00000502802 HCN4Q9Y3Q4 1203 aa8.48□□□□□ -1.05
HMGB1P3-201ENST00000502802 MEN1O00255 615 aa8.47□□□□□ -1.05
HMGB1P3-201ENST00000502802 ZBTB39O15060 712 aa8.47□□□□□ -1.05
HMGB1P3-201ENST00000502802 IGHA2P01877 340 aa8.47□□□□□ -1.05
HMGB1P3-201ENST00000502802 EHHADHQ08426 723 aa8.47□□□□□ -1.05
HMGB1P3-201ENST00000502802 FAM26DQ5JW98 314 aa8.47□□□□□ -1.05
HMGB1P3-201ENST00000502802 ZNF697Q5TEC3 545 aa8.47□□□□□ -1.05
HMGB1P3-201ENST00000502802 ZNF598Q86UK7 904 aaKnown RBP8.47□□□□□ -1.05
HMGB1P3-201ENST00000502802 PPARGC1BQ86YN6 1023 aaKnown RBP8.47□□□□□ -1.05
HMGB1P3-201ENST00000502802 ITPKCQ96DU7 683 aa8.47□□□□□ -1.05
HMGB1P3-201ENST00000502802 ZSCAN10Q96SZ4 725 aaPredicted RBP8.47□□□□□ -1.05
HMGB1P3-201ENST00000502802 USP35Q9P2H5 1018 aa8.47□□□□□ -1.05
HMGB1P3-201ENST00000502802 LOC105371045A0A1W2PR82 267 aa8.46□□□□□ -1.06
HMGB1P3-201ENST00000502802 ZIC2O95409 532 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P3-201ENST00000502802 LDHBP07195 334 aaKnown RBP8.46□□□□□ -1.06
HMGB1P3-201ENST00000502802 MAPK8P45983 427 aa8.46□□□□□ -1.06
HMGB1P3-201ENST00000502802 DGKZQ13574 1117 aa8.46□□□□□ -1.06
HMGB1P3-201ENST00000502802 TSNAXIP1Q2TAA8 658 aa8.46□□□□□ -1.06
HMGB1P3-201ENST00000502802 IFFO2Q5TF58 517 aa8.46□□□□□ -1.06
HMGB1P3-201ENST00000502802 ATCAYQ86WG3 371 aa8.46□□□□□ -1.06
HMGB1P3-201ENST00000502802 SPNS2Q8IVW8 549 aa8.46□□□□□ -1.06
HMGB1P3-201ENST00000502802 ZNF295-AS1Q8N0V1 137 aa8.46□□□□□ -1.06
HMGB1P3-201ENST00000502802 SNIP1Q8TAD8 396 aaKnown RBP8.46□□□□□ -1.06
HMGB1P3-201ENST00000502802 ALKBH8Q96BT7 664 aaKnown RBP8.46□□□□□ -1.06
HMGB1P3-201ENST00000502802 AGBL1Q96MI9 1066 aa8.46□□□□□ -1.06
HMGB1P3-201ENST00000502802 KLF16Q9BXK1 252 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P3-201ENST00000502802 POLIQ9UNA4 740 aa8.46□□□□□ -1.06
HMGB1P3-201ENST00000502802 PARP3Q9Y6F1 533 aa8.46□□□□□ -1.06
HMGB1P3-201ENST00000502802 GPR182O15218 404 aa8.45□□□□□ -1.06
HMGB1P3-201ENST00000502802 MZF1P28698 734 aaPredicted RBP8.45□□□□□ -1.06
HMGB1P3-201ENST00000502802 GTF2E1P29083 439 aaPredicted RBP8.45□□□□□ -1.06
HMGB1P3-201ENST00000502802 FOXC1Q12948 553 aa8.45□□□□□ -1.06
HMGB1P3-201ENST00000502802 MRPL58Q14197 206 aaKnown RBP8.45□□□□□ -1.06
HMGB1P3-201ENST00000502802 ETFBKMTQ8IXQ9 262 aa8.45□□□□□ -1.06
HMGB1P3-201ENST00000502802 NIFKQ9BYG3 293 aaKnown RBP8.45□□□□□ -1.06
HMGB1P3-201ENST00000502802 PHACTR1Q9C0D0 580 aa8.45□□□□□ -1.06
HMGB1P3-201ENST00000502802 PKD2L1Q9P0L9 805 aa8.45□□□□□ -1.06
HMGB1P3-201ENST00000502802 SHROOM4Q9ULL8 1493 aa8.45□□□□□ -1.06
HMGB1P3-201ENST00000502802 PRPF40AO75400 957 aaKnown RBP8.44□□□□□ -1.06
HMGB1P3-201ENST00000502802 USP5P45974 858 aa8.44□□□□□ -1.06
HMGB1P3-201ENST00000502802 WDR4P57081 412 aaKnown RBP8.44□□□□□ -1.06
HMGB1P3-201ENST00000502802 RELBQ01201 579 aa8.44□□□□□ -1.06
HMGB1P3-201ENST00000502802 XPCQ01831 940 aaPredicted RBP8.44□□□□□ -1.06
HMGB1P3-201ENST00000502802 C1orf53Q5VUE5 145 aa8.44□□□□□ -1.06
HMGB1P3-201ENST00000502802 TMEM214Q6NUQ4 689 aaKnown RBP8.44□□□□□ -1.06
HMGB1P3-201ENST00000502802 RHBDD1Q8TEB9 315 aa8.44□□□□□ -1.06
HMGB1P3-201ENST00000502802 IFT43Q96FT9 208 aa8.44□□□□□ -1.06
HMGB1P3-201ENST00000502802 BACH2Q9BYV9 841 aa8.44□□□□□ -1.06
HMGB1P3-201ENST00000502802 ZFAND3Q9H8U3 227 aa8.44□□□□□ -1.06
HMGB1P3-201ENST00000502802 KLK14Q9P0G3 267 aa8.44□□□□□ -1.06
HMGB1P3-201ENST00000502802 ITGAEP38570 1179 aa8.43□□□□□ -1.06
HMGB1P3-201ENST00000502802 ZAP70P43403 619 aa8.43□□□□□ -1.06
HMGB1P3-201ENST00000502802 DNM1Q05193 864 aaKnown RBP8.43□□□□□ -1.06
HMGB1P3-201ENST00000502802 GJD3Q8N144 294 aa8.43□□□□□ -1.06
HMGB1P3-201ENST00000502802 EDEM1Q92611 657 aa8.43□□□□□ -1.06
HMGB1P3-201ENST00000502802 NIF3L1Q9GZT8 377 aa8.43□□□□□ -1.06
HMGB1P3-201ENST00000502802 ZNF395Q9H8N7 513 aaPredicted RBP8.43□□□□□ -1.06
HMGB1P3-201ENST00000502802 PARP2Q9UGN5 583 aa8.43□□□□□ -1.06
HMGB1P3-201ENST00000502802 PDGFAP04085 211 aa8.42□□□□□ -1.06
HMGB1P3-201ENST00000502802 TIMP2P16035 220 aa8.42□□□□□ -1.06
HMGB1P3-201ENST00000502802 ATP2B2Q01814 1243 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms