RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 IFNLR1Q8IU57 520 aaPredicted RBP13.63□□□□□ -0.23
SRSF4-205ENST00000497015 MKRN1Q9UHC7 482 aaKnown RBP13.63□□□□□ -0.23
SRSF4-205ENST00000497015 MYH14Q7Z406 1995 aaKnown RBP13.63□□□□□ -0.23
SRSF4-205ENST00000497015 KIF24Q5T7B8 1368 aa13.62□□□□□ -0.23
SRSF4-205ENST00000497015 CARD14Q9BXL6 1004 aa13.62□□□□□ -0.23
SRSF4-205ENST00000497015 POTEIP0CG38 1075 aa13.61□□□□□ -0.23
SRSF4-205ENST00000497015 POTEJP0CG39 1038 aa13.61□□□□□ -0.23
SRSF4-205ENST00000497015 LMNB1P20700 586 aa13.61□□□□□ -0.23
SRSF4-205ENST00000497015 BBXQ8WY36 941 aaPredicted RBP13.61□□□□□ -0.23
SRSF4-205ENST00000497015 USP42Q9H9J4 1324 aaKnown RBP13.61□□□□□ -0.23
SRSF4-205ENST00000497015 NFKBIEO00221 500 aa13.6□□□□□ -0.23
SRSF4-205ENST00000497015 CRKLP46109 303 aaKnown RBP13.6□□□□□ -0.23
SRSF4-205ENST00000497015 INTS5Q6P9B9 1019 aaKnown RBP13.6□□□□□ -0.23
SRSF4-205ENST00000497015 PRDM10Q9NQV6 1147 aa13.6□□□□□ -0.23
SRSF4-205ENST00000497015 U3KPZ7 1027 aaPredicted RBP13.6□□□□□ -0.23
SRSF4-205ENST00000497015 WASHC2AQ641Q2 1341 aa13.6□□□□□ -0.23
SRSF4-205ENST00000497015 ZC3H4Q9UPT8 1303 aaKnown RBP13.6□□□□□ -0.23
SRSF4-205ENST00000497015 ERVV-2B6SEH9 535 aa13.59□□□□□ -0.23
SRSF4-205ENST00000497015 PPM1GO15355 546 aaPredicted RBP13.59□□□□□ -0.23
SRSF4-205ENST00000497015 CREBZFQ9NS37 354 aa13.59□□□□□ -0.23
SRSF4-205ENST00000497015 COL5A3P25940 1745 aaPredicted RBP13.59□□□□□ -0.23
SRSF4-205ENST00000497015 FAM161AQ3B820 660 aa13.58□□□□□ -0.24
SRSF4-205ENST00000497015 ZNF831Q5JPB2 1677 aa13.58□□□□□ -0.24
SRSF4-205ENST00000497015 PTCD1O75127 700 aaKnown RBP13.57□□□□□ -0.24
SRSF4-205ENST00000497015 ADAMTS7Q9UKP4 1686 aa13.56□□□□□ -0.24
SRSF4-205ENST00000497015 VEGFBP49765 207 aa13.56□□□□□ -0.24
SRSF4-205ENST00000497015 USPL1Q5W0Q7 1092 aa13.56□□□□□ -0.24
SRSF4-205ENST00000497015 POLKQ9UBT6 870 aa13.56□□□□□ -0.24
SRSF4-205ENST00000497015 LBX1P52954 281 aa13.55□□□□□ -0.24
SRSF4-205ENST00000497015 EIF4A2Q14240 407 aaKnown RBP13.55□□□□□ -0.24
SRSF4-205ENST00000497015 NFIXQ14938 502 aa13.55□□□□□ -0.24
SRSF4-205ENST00000497015 CHADLQ6NUI6 762 aa13.55□□□□□ -0.24
SRSF4-205ENST00000497015 BCL2L12Q9HB09 334 aa13.55□□□□□ -0.24
SRSF4-205ENST00000497015 WBP1LQ9NX94 342 aa13.55□□□□□ -0.24
SRSF4-205ENST00000497015 CNTNAP1P78357 1384 aa13.55□□□□□ -0.24
SRSF4-205ENST00000497015 TTLL6Q8N841 843 aa13.54□□□□□ -0.24
SRSF4-205ENST00000497015 NFATC2IPQ8NCF5 419 aa13.54□□□□□ -0.24
SRSF4-205ENST00000497015 ABHD8Q96I13 439 aa13.54□□□□□ -0.24
SRSF4-205ENST00000497015 PASKQ96RG2 1323 aa13.54□□□□□ -0.24
SRSF4-205ENST00000497015 DDNO94850 711 aaPredicted RBP13.53□□□□□ -0.24
SRSF4-205ENST00000497015 CTCFP49711 727 aaPredicted RBP13.53□□□□□ -0.24
SRSF4-205ENST00000497015 CABP4P57796 275 aa13.53□□□□□ -0.24
SRSF4-205ENST00000497015 CDCA8Q53HL2 280 aa13.53□□□□□ -0.24
SRSF4-205ENST00000497015 ITGBL1O95965 494 aaPredicted RBP13.52□□□□□ -0.25
SRSF4-205ENST00000497015 SERPINB2P05120 415 aa13.52□□□□□ -0.25
SRSF4-205ENST00000497015 DPY19L2Q6NUT2 758 aa13.52□□□□□ -0.25
SRSF4-205ENST00000497015 PCDH10Q9P2E7 1040 aa13.52□□□□□ -0.25
SRSF4-205ENST00000497015 CCDC88AQ3V6T2 1871 aa13.51□□□□□ -0.25
SRSF4-205ENST00000497015 CARMIL3Q8ND23 1372 aa13.51□□□□□ -0.25
SRSF4-205ENST00000497015 HSPA8P11142 646 aaKnown RBP13.51□□□□□ -0.25
SRSF4-205ENST00000497015 RGS19P49795 217 aa13.51□□□□□ -0.25
SRSF4-205ENST00000497015 C2CD5Q86YS7 1000 aa13.51□□□□□ -0.25
SRSF4-205ENST00000497015 DNAJC10Q8IXB1 793 aa13.51□□□□□ -0.25
SRSF4-205ENST00000497015 SOS1Q07889 1333 aaPredicted RBP13.5□□□□□ -0.25
SRSF4-205ENST00000497015 EIF4G2P78344 907 aaKnown RBP eCLIP13.5□□□□□ -0.25
SRSF4-205ENST00000497015 ERFEQ4G0M1 354 aa13.5□□□□□ -0.25
SRSF4-205ENST00000497015 AFDNP55196 1824 aaKnown RBP13.49□□□□□ -0.25
SRSF4-205ENST00000497015 C21orf2O43822 256 aa13.49□□□□□ -0.25
SRSF4-205ENST00000497015 ZPR1O75312 459 aa13.49□□□□□ -0.25
SRSF4-205ENST00000497015 CYP19A1P11511 503 aaPredicted RBP13.49□□□□□ -0.25
SRSF4-205ENST00000497015 NARFQ9UHQ1 456 aa13.49□□□□□ -0.25
SRSF4-205ENST00000497015 NRXN2Q9P2S2 1712 aa13.49□□□□□ -0.25
SRSF4-205ENST00000497015 TJP1Q07157 1748 aa13.48□□□□□ -0.25
SRSF4-205ENST00000497015 TIAM2Q8IVF5 1701 aa13.48□□□□□ -0.25
SRSF4-205ENST00000497015 ANKRD26Q9UPS8 1709 aa13.48□□□□□ -0.25
SRSF4-205ENST00000497015 HSP90AB1P08238 724 aaKnown RBP13.48□□□□□ -0.25
SRSF4-205ENST00000497015 MTHFSP49914 203 aa13.48□□□□□ -0.25
SRSF4-205ENST00000497015 PLEKHO1Q53GL0 409 aaPredicted RBP13.48□□□□□ -0.25
SRSF4-205ENST00000497015 ZNF530Q6P9A1 599 aaPredicted RBP13.48□□□□□ -0.25
SRSF4-205ENST00000497015 KIF20BQ96Q89 1820 aa13.48□□□□□ -0.25
SRSF4-205ENST00000497015 H0YIN7 160 aa13.47□□□□□ -0.25
SRSF4-205ENST00000497015 PAXIP1Q6ZW49 1069 aaPredicted RBP13.47□□□□□ -0.25
SRSF4-205ENST00000497015 CCDC24Q8N4L8 307 aa13.47□□□□□ -0.25
SRSF4-205ENST00000497015 TMEM88BA6NKF7 163 aa13.46□□□□□ -0.25
SRSF4-205ENST00000497015 AEBP1Q8IUX7 1158 aa13.46□□□□□ -0.25
SRSF4-205ENST00000497015 AIDAQ96BJ3 306 aa13.46□□□□□ -0.25
SRSF4-205ENST00000497015 TAF1DQ9H5J8 278 aaPredicted RBP13.46□□□□□ -0.25
SRSF4-205ENST00000497015 ZBTB1Q9Y2K1 713 aa13.46□□□□□ -0.25
SRSF4-205ENST00000497015 VIRMAQ69YN4 1812 aaKnown RBP13.46□□□□□ -0.26
SRSF4-205ENST00000497015 DLEC1Q9Y238 1755 aa13.45□□□□□ -0.26
SRSF4-205ENST00000497015 MLLT1Q03111 559 aaPredicted RBP13.45□□□□□ -0.26
SRSF4-205ENST00000497015 LDHDQ86WU2 507 aa13.45□□□□□ -0.26
SRSF4-205ENST00000497015 LGR6Q9HBX8 967 aa13.45□□□□□ -0.26
SRSF4-205ENST00000497015 RASSF10A6NK89 507 aa13.44□□□□□ -0.26
SRSF4-205ENST00000497015 CCDC85CA6NKD9 419 aa13.44□□□□□ -0.26
SRSF4-205ENST00000497015 TNNT2P45379 298 aaPredicted RBP13.44□□□□□ -0.26
SRSF4-205ENST00000497015 SLC39A6Q13433 755 aa13.44□□□□□ -0.26
SRSF4-205ENST00000497015 BICDL1Q6ZP65 573 aa13.44□□□□□ -0.26
SRSF4-205ENST00000497015 ZNF622Q969S3 477 aaKnown RBP eCLIP13.44□□□□□ -0.269e-13■■□□□ 12.7
SRSF4-205ENST00000497015 LTBP3Q9NS15 1303 aa13.43□□□□□ -0.26
SRSF4-205ENST00000497015 DEFB115Q30KQ5 88 aa13.43□□□□□ -0.26
SRSF4-205ENST00000497015 AMOTQ4VCS5 1084 aa13.43□□□□□ -0.26
SRSF4-205ENST00000497015 TBC1D9BQ66K14 1250 aa13.43□□□□□ -0.26
SRSF4-205ENST00000497015 L3MBTL3Q96JM7 780 aaPredicted RBP13.43□□□□□ -0.26
SRSF4-205ENST00000497015 WDR33Q9C0J8 1336 aaKnown RBP13.42□□□□□ -0.26
SRSF4-205ENST00000497015 FER1L6Q2WGJ9 1857 aa13.42□□□□□ -0.26
SRSF4-205ENST00000497015 HSPA5P11021 654 aaKnown RBP13.42□□□□□ -0.26
SRSF4-205ENST00000497015 FMR1Q06787 632 aaKnown RBP eCLIP13.42□□□□□ -0.26
SRSF4-205ENST00000497015 MKRN4PQ13434 485 aaPredicted RBP13.42□□□□□ -0.26
SRSF4-205ENST00000497015 BRIP1Q9BX63 1249 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms