RNA–Protein interactions for RNA: ENST00000496703.1

ITGB5-210, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-210ENST00000496703 PRAMEF22A3QJZ6 481 aa21.38■■□□□ 1.01
ITGB5-210ENST00000496703 RFC4P35249 363 aa21.38■■□□□ 1.01
ITGB5-210ENST00000496703 FMNL2Q96PY5 1086 aa21.38■■□□□ 1.01
ITGB5-210ENST00000496703 KIF13BQ9NQT8 1826 aa21.38■■□□□ 1.01
ITGB5-210ENST00000496703 USP42Q9H9J4 1324 aaKnown RBP21.36■■□□□ 1.01
ITGB5-210ENST00000496703 TMPOP42166 694 aaKnown RBP21.36■■□□□ 1.01
ITGB5-210ENST00000496703 WDR43Q15061 677 aaKnown RBP eCLIP21.36■■□□□ 1.01
ITGB5-210ENST00000496703 TAF7Q15545 349 aaPredicted RBP21.36■■□□□ 1.01
ITGB5-210ENST00000496703 RRP7AQ9Y3A4 280 aaKnown RBP21.36■■□□□ 1.01
ITGB5-210ENST00000496703 COL15A1P39059 1388 aa21.36■■□□□ 1.01
ITGB5-210ENST00000496703 MMP10P09238 476 aa21.35■■□□□ 1.01
ITGB5-210ENST00000496703 CANXP27824 592 aaKnown RBP21.35■■□□□ 1.01
ITGB5-210ENST00000496703 RIPK4P57078 832 aa21.35■■□□□ 1.01
ITGB5-210ENST00000496703 CHD4Q14839 1912 aa21.35■■□□□ 1.01
ITGB5-210ENST00000496703 KIAA1551Q9HCM1 1747 aa21.35■■□□□ 1.01
ITGB5-210ENST00000496703 AFDNP55196 1824 aaKnown RBP21.34■■□□□ 1.01
ITGB5-210ENST00000496703 LAMB4A4D0S4 1761 aa21.34■■□□□ 1.01
ITGB5-210ENST00000496703 FKBP8Q14318 412 aa21.34■■□□□ 1.01
ITGB5-210ENST00000496703 USP16Q9Y5T5 823 aa21.34■■□□□ 1.01
ITGB5-210ENST00000496703 N4BP2Q86UW6 1770 aaPredicted RBP21.33■■□□□ 1.01
ITGB5-210ENST00000496703 STARD3NLO95772 234 aa21.33■■□□□ 1.01
ITGB5-210ENST00000496703 A1BGP04217 495 aa21.33■■□□□ 1.01
ITGB5-210ENST00000496703 NLGN1Q8N2Q7 840 aa21.33■■□□□ 1.01
ITGB5-210ENST00000496703 EIF5P55010 431 aaKnown RBP21.32■■□□□ 1
ITGB5-210ENST00000496703 RUNDC1Q96C34 613 aa21.32■■□□□ 1
ITGB5-210ENST00000496703 PIP4K2AP48426 406 aaPredicted RBP21.31■■□□□ 1
ITGB5-210ENST00000496703 NEUROD2Q15784 382 aa21.31■■□□□ 1
ITGB5-210ENST00000496703 USPL1Q5W0Q7 1092 aa21.31■■□□□ 1
ITGB5-210ENST00000496703 TEX13AQ9BXU3 409 aaPredicted RBP21.31■■□□□ 1
ITGB5-210ENST00000496703 BCL2L12Q9HB09 334 aa21.31■■□□□ 1
ITGB5-210ENST00000496703 CD2APQ9Y5K6 639 aa21.31■■□□□ 1
ITGB5-210ENST00000496703 SCN7AQ01118 1682 aa21.31■■□□□ 1
ITGB5-210ENST00000496703 NARFQ9UHQ1 456 aa21.3■■□□□ 1
ITGB5-210ENST00000496703 BCORQ6W2J9 1755 aa21.29■■□□□ 1
ITGB5-210ENST00000496703 SNRPA1P09661 255 aaKnown RBP21.29■■□□□ 1
ITGB5-210ENST00000496703 DDR1Q08345 913 aa21.29■■□□□ 1
ITGB5-210ENST00000496703 TRIM35Q9UPQ4 493 aa21.29■■□□□ 1
ITGB5-210ENST00000496703 ZPR1O75312 459 aa21.28■■□□□ 1
ITGB5-210ENST00000496703 EIF4A1P60842 406 aaKnown RBP21.28■■□□□ 1
ITGB5-210ENST00000496703 BRCA1P38398 1863 aaKnown RBP21.28■■□□□ 1
ITGB5-210ENST00000496703 NRXN2Q9P2S2 1712 aa21.27■■□□□ 1
ITGB5-210ENST00000496703 PNISRQ8TF01 805 aaKnown RBP21.27■■□□□ 1
ITGB5-210ENST00000496703 YBX3P16989 372 aaKnown RBP eCLIP21.26■□□□□ 0.99
ITGB5-210ENST00000496703 TM4SF1P30408 202 aa21.26■□□□□ 0.99
ITGB5-210ENST00000496703 IL6STP40189 918 aaPredicted RBP21.26■□□□□ 0.99
ITGB5-210ENST00000496703 ZNF330Q9Y3S2 320 aaPredicted RBP21.26■□□□□ 0.99
ITGB5-210ENST00000496703 C10orf71Q711Q0 1435 aa21.26■□□□□ 0.99
ITGB5-210ENST00000496703 DCAF8L1A6NGE4 600 aa21.25■□□□□ 0.99
ITGB5-210ENST00000496703 NBPF26B4DH59 902 aa21.25■□□□□ 0.99
ITGB5-210ENST00000496703 GIGYF1O75420 1035 aaPredicted RBP21.25■□□□□ 0.99
ITGB5-210ENST00000496703 NBPF10Q6P3W6 841 aaKnown RBP21.25■□□□□ 0.99
ITGB5-210ENST00000496703 NBPF15Q8N660 670 aa21.25■□□□□ 0.99
ITGB5-210ENST00000496703 TBC1D2BQ9UPU7 963 aa21.25■□□□□ 0.99
ITGB5-210ENST00000496703 POLRMTO00411 1230 aaKnown RBP21.24■□□□□ 0.99
ITGB5-210ENST00000496703 ANP32CO43423 234 aa21.24■□□□□ 0.99
ITGB5-210ENST00000496703 NFIXQ14938 502 aa21.24■□□□□ 0.99
ITGB5-210ENST00000496703 GPR162Q16538 588 aa21.24■□□□□ 0.99
ITGB5-210ENST00000496703 PELP1Q8IZL8 1130 aaKnown RBP21.24■□□□□ 0.99
ITGB5-210ENST00000496703 PARP3Q9Y6F1 533 aa21.24■□□□□ 0.99
ITGB5-210ENST00000496703 APAF1O14727 1248 aa21.23■□□□□ 0.99
ITGB5-210ENST00000496703 LMOD3Q0VAK6 560 aa21.23■□□□□ 0.99
ITGB5-210ENST00000496703 TSPYL4Q9UJ04 414 aa21.23■□□□□ 0.99
ITGB5-210ENST00000496703 WWC3Q9ULE0 1092 aa21.23■□□□□ 0.99
ITGB5-210ENST00000496703 PXDNLA1KZ92 1463 aa21.23■□□□□ 0.99
ITGB5-210ENST00000496703 A0A087WZG4 1122 aa21.22■□□□□ 0.99
ITGB5-210ENST00000496703 NUP98P52948 1817 aa21.21■□□□□ 0.99
ITGB5-210ENST00000496703 CAMTA2O94983 1202 aa21.21■□□□□ 0.99
ITGB5-210ENST00000496703 ANKRD31Q8N7Z5 1873 aa21.2■□□□□ 0.98
ITGB5-210ENST00000496703 SENP3-EIF4A1A0A087X0R7 540 aa21.2■□□□□ 0.98
ITGB5-210ENST00000496703 CHL1O00533 1208 aa21.19■□□□□ 0.98
ITGB5-210ENST00000496703 TBC1D9BQ66K14 1250 aa21.19■□□□□ 0.98
ITGB5-210ENST00000496703 MRS2Q9HD23 443 aa21.19■□□□□ 0.98
ITGB5-210ENST00000496703 A0A0G2JLW4 131 aa21.18■□□□□ 0.98
ITGB5-210ENST00000496703 BICDL1Q6ZP65 573 aa21.18■□□□□ 0.98
ITGB5-210ENST00000496703 DZIP3Q86Y13 1208 aaKnown RBP21.18■□□□□ 0.98
ITGB5-210ENST00000496703 BABAM1Q9NWV8 329 aa21.18■□□□□ 0.98
ITGB5-210ENST00000496703 DPEP1P16444 411 aa21.17■□□□□ 0.98
ITGB5-210ENST00000496703 KRT24Q2M2I5 525 aa21.17■□□□□ 0.98
ITGB5-210ENST00000496703 YY1P25490 414 aa21.16■□□□□ 0.98
ITGB5-210ENST00000496703 LAS1LQ9Y4W2 734 aaKnown RBP21.16■□□□□ 0.98
ITGB5-210ENST00000496703 ARFGEF1Q9Y6D6 1849 aa21.15■□□□□ 0.98
ITGB5-210ENST00000496703 DLEC1Q9Y238 1755 aa21.15■□□□□ 0.98
ITGB5-210ENST00000496703 CARMIL3Q8ND23 1372 aa21.15■□□□□ 0.98
ITGB5-210ENST00000496703 SERPINB2P05120 415 aa21.15■□□□□ 0.98
ITGB5-210ENST00000496703 KCNA3P22001 575 aa21.15■□□□□ 0.98
ITGB5-210ENST00000496703 TGFB2P61812 414 aa21.15■□□□□ 0.98
ITGB5-210ENST00000496703 ZNF853P0CG23 659 aa21.13■□□□□ 0.97
ITGB5-210ENST00000496703 PDIA6Q15084 440 aa21.13■□□□□ 0.97
ITGB5-210ENST00000496703 NPM2Q86SE8 214 aaKnown RBP21.13■□□□□ 0.97
ITGB5-210ENST00000496703 NGEFQ8N5V2 710 aa21.13■□□□□ 0.97
ITGB5-210ENST00000496703 MYL6BP14649 208 aa21.12■□□□□ 0.97
ITGB5-210ENST00000496703 EIF2S2P20042 333 aaKnown RBP21.12■□□□□ 0.97
ITGB5-210ENST00000496703 CHRNA5P30532 468 aa21.12■□□□□ 0.97
ITGB5-210ENST00000496703 HLFQ16534 295 aa21.12■□□□□ 0.97
ITGB5-210ENST00000496703 PROSER3Q2NL68 480 aa21.12■□□□□ 0.97
ITGB5-210ENST00000496703 LRP10Q7Z4F1 713 aa21.12■□□□□ 0.97
ITGB5-210ENST00000496703 CFAP44Q96MT7 982 aa21.12■□□□□ 0.97
ITGB5-210ENST00000496703 MBIPQ9NS73 344 aa21.12■□□□□ 0.97
ITGB5-210ENST00000496703 COL11A2P13942 1736 aaPredicted RBP21.12■□□□□ 0.97
ITGB5-210ENST00000496703 ANXA1P04083 346 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms