RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 CDKL5O76039 1030 aa5.96□□□□□ -1.46
NF1-216ENST00000495910 SYF2O95926 243 aaKnown RBP5.96□□□□□ -1.46
NF1-216ENST00000495910 NEK4P51957 841 aa5.96□□□□□ -1.46
NF1-216ENST00000495910 CCDC38Q502W7 563 aa5.96□□□□□ -1.46
NF1-216ENST00000495910 PPP4R3AQ6IN85 833 aa5.96□□□□□ -1.46
NF1-216ENST00000495910 GBP5Q96PP8 586 aa5.96□□□□□ -1.46
NF1-216ENST00000495910 TTC12Q9H892 705 aaPredicted RBP5.96□□□□□ -1.46
NF1-216ENST00000495910 PAXBP1Q9Y5B6 917 aa5.96□□□□□ -1.46
NF1-216ENST00000495910 CCDC89Q8N998 374 aa5.96□□□□□ -1.46
NF1-216ENST00000495910 CCDC171Q6TFL3 1326 aa5.96□□□□□ -1.46
NF1-216ENST00000495910 CCDC69A6NI79 296 aa5.96□□□□□ -1.46
NF1-216ENST00000495910 CTAGE5O15320 804 aa5.96□□□□□ -1.46
NF1-216ENST00000495910 CAPN2P17655 700 aa5.96□□□□□ -1.46
NF1-216ENST00000495910 SNX16P57768 344 aa5.96□□□□□ -1.46
NF1-216ENST00000495910 INTS8Q75QN2 995 aaKnown RBP5.96□□□□□ -1.46
NF1-216ENST00000495910 SELENOSQ9BQE4 189 aa5.96□□□□□ -1.46
NF1-216ENST00000495910 FAF1Q9UNN5 650 aaPredicted RBP5.96□□□□□ -1.46
NF1-216ENST00000495910 PFDN1O60925 122 aa5.95□□□□□ -1.46
NF1-216ENST00000495910 CNGA1P29973 690 aa5.95□□□□□ -1.46
NF1-216ENST00000495910 CPLX4Q7Z7G2 160 aa5.95□□□□□ -1.46
NF1-216ENST00000495910 GSDMDP57764 484 aa5.95□□□□□ -1.46
NF1-216ENST00000495910 PRPF4BQ13523 1007 aaKnown RBP5.95□□□□□ -1.46
NF1-216ENST00000495910 SLMAPQ14BN4 828 aa5.95□□□□□ -1.46
NF1-216ENST00000495910 PRIMPOLQ96LW4 560 aa5.95□□□□□ -1.46
NF1-216ENST00000495910 NUP88Q99567 741 aaPredicted RBP5.95□□□□□ -1.46
NF1-216ENST00000495910 BAZ1BQ9UIG0 1483 aaKnown RBP5.95□□□□□ -1.46
NF1-216ENST00000495910 VPS41P49754 854 aa5.95□□□□□ -1.46
NF1-216ENST00000495910 TEFQ10587 303 aa5.95□□□□□ -1.46
NF1-216ENST00000495910 TAF7Q15545 349 aaPredicted RBP5.95□□□□□ -1.46
NF1-216ENST00000495910 TDRD12Q587J7 1177 aaKnown RBP5.95□□□□□ -1.46
NF1-216ENST00000495910 CXorf38Q8TB03 319 aa5.95□□□□□ -1.46
NF1-216ENST00000495910 CAPZA3Q96KX2 299 aa5.95□□□□□ -1.46
NF1-216ENST00000495910 PLVAPQ9BX97 442 aa5.95□□□□□ -1.46
NF1-216ENST00000495910 GSDMBQ8TAX9 411 aa5.95□□□□□ -1.46
NF1-216ENST00000495910 ATP2A1O14983 1001 aa5.95□□□□□ -1.46
NF1-216ENST00000495910 GCKP35557 465 aa5.95□□□□□ -1.46
NF1-216ENST00000495910 NGEFQ8N5V2 710 aa5.95□□□□□ -1.46
NF1-216ENST00000495910 PFDN4Q9NQP4 134 aa5.95□□□□□ -1.46
NF1-216ENST00000495910 ANO10Q9NW15 660 aa5.95□□□□□ -1.46
NF1-216ENST00000495910 CYP46A1Q9Y6A2 500 aa5.95□□□□□ -1.46
NF1-216ENST00000495910 ZNF76P36508 570 aa5.95□□□□□ -1.46
NF1-216ENST00000495910 ELL2O00472 640 aaPredicted RBP5.94□□□□□ -1.46
NF1-216ENST00000495910 MCM5P33992 734 aa5.94□□□□□ -1.46
NF1-216ENST00000495910 TRIM60Q495X7 471 aa5.94□□□□□ -1.46
NF1-216ENST00000495910 POTEDQ86YR6 584 aa5.94□□□□□ -1.46
NF1-216ENST00000495910 VPS52Q8N1B4 723 aa5.94□□□□□ -1.46
NF1-216ENST00000495910 ARFGAP2Q8N6H7 521 aa5.94□□□□□ -1.46
NF1-216ENST00000495910 ANKRD24Q8TF21 1146 aa5.94□□□□□ -1.46
NF1-216ENST00000495910 WASF1Q92558 559 aa5.94□□□□□ -1.46
NF1-216ENST00000495910 PLIN1O60240 522 aa5.94□□□□□ -1.46
NF1-216ENST00000495910 TTC16Q8NEE8 873 aa5.94□□□□□ -1.46
NF1-216ENST00000495910 ATP2A3Q93084 1043 aa5.94□□□□□ -1.46
NF1-216ENST00000495910 CLIP1P30622 1438 aa5.94□□□□□ -1.46
NF1-216ENST00000495910 WASHC2AQ641Q2 1341 aa5.94□□□□□ -1.46
NF1-216ENST00000495910 CCDC172P0C7W6 258 aa5.94□□□□□ -1.46
NF1-216ENST00000495910 EIF2S2P20042 333 aaKnown RBP5.94□□□□□ -1.46
NF1-216ENST00000495910 RAP1GDS1P52306 607 aa5.94□□□□□ -1.46
NF1-216ENST00000495910 SNW1Q13573 536 aaKnown RBP5.94□□□□□ -1.46
NF1-216ENST00000495910 USP37Q86T82 979 aa5.94□□□□□ -1.46
NF1-216ENST00000495910 ROCK2O75116 1388 aaKnown RBP5.94□□□□□ -1.46
NF1-216ENST00000495910 CCT6BQ92526 530 aa5.94□□□□□ -1.46
NF1-216ENST00000495910 USP6NLQ92738 828 aa5.94□□□□□ -1.46
NF1-216ENST00000495910 ARFGAP3Q9NP61 516 aa5.94□□□□□ -1.46
NF1-216ENST00000495910 TNIP1Q15025 636 aa5.94□□□□□ -1.46
NF1-216ENST00000495910 RBBP5Q15291 538 aaKnown RBP5.94□□□□□ -1.46
NF1-216ENST00000495910 LRRC23Q53EV4 343 aaPredicted RBP5.94□□□□□ -1.46
NF1-216ENST00000495910 LARP1BQ659C4 914 aaKnown RBP5.94□□□□□ -1.46
NF1-216ENST00000495910 MAP2K2P36507 400 aa5.94□□□□□ -1.46
NF1-216ENST00000495910 B4GALNT4Q76KP1 1039 aa5.94□□□□□ -1.46
NF1-216ENST00000495910 LTV1Q96GA3 475 aaPredicted RBP5.94□□□□□ -1.46
NF1-216ENST00000495910 HAUS8Q9BT25 410 aa5.94□□□□□ -1.46
NF1-216ENST00000495910 COG7P83436 770 aa5.94□□□□□ -1.46
NF1-216ENST00000495910 CETN1Q12798 172 aa5.94□□□□□ -1.46
NF1-216ENST00000495910 CCDC40Q4G0X9 1142 aa5.94□□□□□ -1.46
NF1-216ENST00000495910 JADE2Q9NQC1 790 aa5.94□□□□□ -1.46
NF1-216ENST00000495910 ARHGAP24Q8N264 748 aa5.93□□□□□ -1.46
NF1-216ENST00000495910 PSPC1Q8WXF1 523 aaKnown RBP5.93□□□□□ -1.46
NF1-216ENST00000495910 TMX1Q9H3N1 280 aa5.93□□□□□ -1.46
NF1-216ENST00000495910 CCDC196A0A1B0GTZ2 297 aa5.93□□□□□ -1.46
NF1-216ENST00000495910 BICD1Q96G01 975 aa5.93□□□□□ -1.46
NF1-216ENST00000495910 MYCBPQ99417 103 aaPredicted RBP5.93□□□□□ -1.46
NF1-216ENST00000495910 LNPKQ9C0E8 428 aa5.93□□□□□ -1.46
NF1-216ENST00000495910 SPECC1L-ADORA2AF8WAN1 911 aa5.93□□□□□ -1.46
NF1-216ENST00000495910 XPCQ01831 940 aaPredicted RBP5.93□□□□□ -1.46
NF1-216ENST00000495910 GKAP1Q5VSY0 366 aaPredicted RBP5.93□□□□□ -1.46
NF1-216ENST00000495910 RPAINQ86UA6 219 aa5.93□□□□□ -1.46
NF1-216ENST00000495910 SMARCC2Q8TAQ2 1214 aa5.93□□□□□ -1.46
NF1-216ENST00000495910 BAG1Q99933 345 aaPredicted RBP5.93□□□□□ -1.46
NF1-216ENST00000495910 CTAGE9A4FU28 777 aa5.93□□□□□ -1.46
NF1-216ENST00000495910 ZSCAN31Q96LW9 406 aaPredicted RBP5.93□□□□□ -1.46
NF1-216ENST00000495910 SELENOOQ9BVL4 669 aa5.93□□□□□ -1.46
NF1-216ENST00000495910 POLE3Q9NRF9 147 aa5.93□□□□□ -1.46
NF1-216ENST00000495910 RRP7AQ9Y3A4 280 aaKnown RBP5.93□□□□□ -1.46
NF1-216ENST00000495910 ATP2A2P16615 1042 aaKnown RBP5.93□□□□□ -1.46
NF1-216ENST00000495910 ATICP31939 592 aa5.93□□□□□ -1.46
NF1-216ENST00000495910 NOP2P46087 812 aaKnown RBP5.93□□□□□ -1.46
NF1-216ENST00000495910 TRIM4Q9C037 500 aa5.93□□□□□ -1.46
NF1-216ENST00000495910 PPP6R1Q9UPN7 881 aa5.93□□□□□ -1.46
NF1-216ENST00000495910 PALM3A6NDB9 673 aaPredicted RBP5.93□□□□□ -1.46
NF1-216ENST00000495910 C16orf45Q96MC5 204 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 364.5 ms