RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 UBTFL1P0CB47 393 aaPredicted RBP12.9□□□□□ -0.34
SAMM50-206ENST00000494795 ATP8B2P98198 1209 aa12.9□□□□□ -0.34
SAMM50-206ENST00000494795 ZNF790Q6PG37 636 aa12.9□□□□□ -0.34
SAMM50-206ENST00000494795 ANTXR1Q9H6X2 564 aa12.9□□□□□ -0.34
SAMM50-206ENST00000494795 SOS1Q07889 1333 aaPredicted RBP12.9□□□□□ -0.34
SAMM50-206ENST00000494795 NUTM1Q86Y26 1132 aa12.9□□□□□ -0.34
SAMM50-206ENST00000494795 SRCIN1Q9C0H9 1055 aa12.9□□□□□ -0.34
SAMM50-206ENST00000494795 BABAM1Q9NWV8 329 aa12.9□□□□□ -0.34
SAMM50-206ENST00000494795 TATP17735 454 aaPredicted RBP12.9□□□□□ -0.34
SAMM50-206ENST00000494795 SLC52A2Q9HAB3 445 aa12.9□□□□□ -0.34
SAMM50-206ENST00000494795 PRDM11Q9NQV5 511 aa12.9□□□□□ -0.34
SAMM50-206ENST00000494795 CAMTA1Q9Y6Y1 1673 aa12.89□□□□□ -0.35
SAMM50-206ENST00000494795 HEG1Q9ULI3 1381 aa12.89□□□□□ -0.35
SAMM50-206ENST00000494795 PDE1AP54750 535 aa12.89□□□□□ -0.35
SAMM50-206ENST00000494795 IL25Q9H293 177 aa12.89□□□□□ -0.35
SAMM50-206ENST00000494795 PA2G4Q9UQ80 394 aaKnown RBP12.89□□□□□ -0.35
SAMM50-206ENST00000494795 CRYBG1Q9Y4K1 1723 aa12.89□□□□□ -0.35
SAMM50-206ENST00000494795 RTL5Q5HYW3 569 aaPredicted RBP12.88□□□□□ -0.35
SAMM50-206ENST00000494795 LARP1Q6PKG0 1096 aaKnown RBP12.88□□□□□ -0.35
SAMM50-206ENST00000494795 DCCP43146 1447 aa12.88□□□□□ -0.35
SAMM50-206ENST00000494795 SRGAP3O43295 1099 aa12.88□□□□□ -0.35
SAMM50-206ENST00000494795 GNAI3P08754 354 aa12.88□□□□□ -0.35
SAMM50-206ENST00000494795 TOM1L2Q6ZVM7 507 aa12.88□□□□□ -0.35
SAMM50-206ENST00000494795 DBF4Q9UBU7 674 aaPredicted RBP12.88□□□□□ -0.35
SAMM50-206ENST00000494795 RBM25P49756 843 aaKnown RBP12.87□□□□□ -0.35
SAMM50-206ENST00000494795 KLHDC4Q8TBB5 520 aa12.87□□□□□ -0.35
SAMM50-206ENST00000494795 SALL3Q9BXA9 1300 aa12.87□□□□□ -0.35
SAMM50-206ENST00000494795 CDC45O75419 566 aa12.87□□□□□ -0.35
SAMM50-206ENST00000494795 SURF6O75683 361 aaKnown RBP12.87□□□□□ -0.35
SAMM50-206ENST00000494795 DDX54Q8TDD1 881 aaKnown RBP12.87□□□□□ -0.35
SAMM50-206ENST00000494795 KAZALD1Q96I82 304 aa12.87□□□□□ -0.35
SAMM50-206ENST00000494795 C5P01031 1676 aa12.86□□□□□ -0.35
SAMM50-206ENST00000494795 SIPA1L3O60292 1781 aaPredicted RBP12.86□□□□□ -0.35
SAMM50-206ENST00000494795 HMMRO75330 724 aa12.86□□□□□ -0.35
SAMM50-206ENST00000494795 LRRCC1Q9C099 1032 aa12.86□□□□□ -0.35
SAMM50-206ENST00000494795 IBTKQ9P2D0 1353 aaPredicted RBP12.86□□□□□ -0.35
SAMM50-206ENST00000494795 IGKV5-2P06315 115 aa12.86□□□□□ -0.35
SAMM50-206ENST00000494795 IFNL2Q8IZJ0 200 aa12.86□□□□□ -0.35
SAMM50-206ENST00000494795 SOS2Q07890 1332 aaPredicted RBP12.85□□□□□ -0.35
SAMM50-206ENST00000494795 BECN1Q14457 450 aa12.85□□□□□ -0.35
SAMM50-206ENST00000494795 COPS6Q7L5N1 327 aa12.85□□□□□ -0.35
SAMM50-206ENST00000494795 XAGE3Q8WTP9 111 aa12.85□□□□□ -0.35
SAMM50-206ENST00000494795 SSH3Q8TE77 659 aa12.85□□□□□ -0.35
SAMM50-206ENST00000494795 SPG7Q9UQ90 795 aa12.85□□□□□ -0.35
SAMM50-206ENST00000494795 ATF5Q9Y2D1 282 aaPredicted RBP12.84□□□□□ -0.35
SAMM50-206ENST00000494795 RILPL2Q969X0 211 aa12.84□□□□□ -0.35
SAMM50-206ENST00000494795 SUCLG2Q96I99 432 aa12.84□□□□□ -0.35
SAMM50-206ENST00000494795 PTCD1O75127 700 aaKnown RBP12.84□□□□□ -0.35
SAMM50-206ENST00000494795 HOXB7P09629 217 aa12.84□□□□□ -0.35
SAMM50-206ENST00000494795 MX1P20591 662 aa12.84□□□□□ -0.35
SAMM50-206ENST00000494795 EPHA10Q5JZY3 1008 aa12.84□□□□□ -0.35
SAMM50-206ENST00000494795 KSR2Q6VAB6 950 aa12.84□□□□□ -0.35
SAMM50-206ENST00000494795 LRP10Q7Z4F1 713 aa12.84□□□□□ -0.35
SAMM50-206ENST00000494795 CACNA1FO60840 1977 aa12.84□□□□□ -0.35
SAMM50-206ENST00000494795 ATP5J2-PTCD1G3V325 749 aa12.83□□□□□ -0.36
SAMM50-206ENST00000494795 POLA2Q14181 598 aa12.83□□□□□ -0.36
SAMM50-206ENST00000494795 USP26Q9BXU7 913 aa12.83□□□□□ -0.36
SAMM50-206ENST00000494795 C9orf78Q9NZ63 289 aaPredicted RBP12.83□□□□□ -0.36
SAMM50-206ENST00000494795 CABP4P57796 275 aa12.83□□□□□ -0.36
SAMM50-206ENST00000494795 DDX21Q9NR30 783 aaKnown RBP eCLIP12.83□□□□□ -0.36
SAMM50-206ENST00000494795 SCN11AQ9UI33 1791 aa12.82□□□□□ -0.36
SAMM50-206ENST00000494795 NCOA3Q9Y6Q9 1424 aa12.82□□□□□ -0.36
SAMM50-206ENST00000494795 TRIM6-TRIM34B2RNG4 842 aa12.82□□□□□ -0.36
SAMM50-206ENST00000494795 RHPN1Q8TCX5 695 aa12.82□□□□□ -0.36
SAMM50-206ENST00000494795 DCAF5Q96JK2 942 aa12.82□□□□□ -0.36
SAMM50-206ENST00000494795 MYD88Q99836 296 aa12.82□□□□□ -0.36
SAMM50-206ENST00000494795 SIL1Q9H173 461 aa12.82□□□□□ -0.36
SAMM50-206ENST00000494795 BICC1Q9H694 974 aaKnown RBP12.82□□□□□ -0.36
SAMM50-206ENST00000494795 ADAMTS7Q9UKP4 1686 aa12.82□□□□□ -0.36
SAMM50-206ENST00000494795 WDR17Q8IZU2 1322 aa12.82□□□□□ -0.36
SAMM50-206ENST00000494795 CPDO75976 1380 aa12.82□□□□□ -0.36
SAMM50-206ENST00000494795 RIC3Q7Z5B4 369 aa12.81□□□□□ -0.36
SAMM50-206ENST00000494795 COL5A2P05997 1499 aaPredicted RBP12.81□□□□□ -0.36
SAMM50-206ENST00000494795 NBPF26B4DH59 902 aa12.81□□□□□ -0.36
SAMM50-206ENST00000494795 NBPF14Q5TI25 921 aa12.81□□□□□ -0.36
SAMM50-206ENST00000494795 NBPF10Q6P3W6 841 aaKnown RBP12.81□□□□□ -0.36
SAMM50-206ENST00000494795 NBPF15Q8N660 670 aa12.81□□□□□ -0.36
SAMM50-206ENST00000494795 PXDNLA1KZ92 1463 aa12.81□□□□□ -0.36
SAMM50-206ENST00000494795 A1BGP04217 495 aa12.81□□□□□ -0.36
SAMM50-206ENST00000494795 ZCRB1Q8TBF4 217 aaKnown RBP12.81□□□□□ -0.36
SAMM50-206ENST00000494795 OSBPL3Q9H4L5 887 aa12.8□□□□□ -0.36
SAMM50-206ENST00000494795 PALD1Q9ULE6 856 aa12.8□□□□□ -0.36
SAMM50-206ENST00000494795 TTC5Q8N0Z6 440 aa12.8□□□□□ -0.36
SAMM50-206ENST00000494795 HYPKQ9NX55 129 aa12.79□□□□□ -0.36
SAMM50-206ENST00000494795 TLR7Q9NYK1 1049 aaKnown RBP12.79□□□□□ -0.36
SAMM50-206ENST00000494795 OVOS2A0A0G2JMS6 1433 aa12.79□□□□□ -0.36
SAMM50-206ENST00000494795 DTNBO60941 627 aa12.79□□□□□ -0.36
SAMM50-206ENST00000494795 TTLL7Q6ZT98 887 aa12.79□□□□□ -0.36
SAMM50-206ENST00000494795 HSCBQ8IWL3 235 aa12.79□□□□□ -0.36
SAMM50-206ENST00000494795 PI4K2BQ8TCG2 481 aa12.79□□□□□ -0.36
SAMM50-206ENST00000494795 BTG4Q9NY30 223 aa12.79□□□□□ -0.36
SAMM50-206ENST00000494795 N4BP2Q86UW6 1770 aaPredicted RBP12.79□□□□□ -0.36
SAMM50-206ENST00000494795 GRM8O00222 908 aa12.79□□□□□ -0.36
SAMM50-206ENST00000494795 EVA1CP58658 441 aa12.79□□□□□ -0.36
SAMM50-206ENST00000494795 NEURL1BA8MQ27 555 aa12.78□□□□□ -0.36
SAMM50-206ENST00000494795 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.78□□□□□ -0.36
SAMM50-206ENST00000494795 SNRPA1P09661 255 aaKnown RBP12.78□□□□□ -0.36
SAMM50-206ENST00000494795 CHMLP26374 656 aa12.77□□□□□ -0.36
SAMM50-206ENST00000494795 LINS1Q8NG48 757 aa12.77□□□□□ -0.36
SAMM50-206ENST00000494795 NDUFB9Q9Y6M9 179 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms