RNA–Protein interactions for RNA: ENST00000491288.5

DNMT3A-214, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-214ENST00000491288 PXDNLA1KZ92 1463 aa17.73■□□□□ 0.43
DNMT3A-214ENST00000491288 C10orf71Q711Q0 1435 aa17.72■□□□□ 0.43
DNMT3A-214ENST00000491288 VIRMAQ69YN4 1812 aaKnown RBP17.72■□□□□ 0.43
DNMT3A-214ENST00000491288 CEMIPQ8WUJ3 1361 aa17.72■□□□□ 0.43
DNMT3A-214ENST00000491288 CCER2I3L3R5 266 aa17.72■□□□□ 0.43
DNMT3A-214ENST00000491288 APAF1O14727 1248 aa17.72■□□□□ 0.43
DNMT3A-214ENST00000491288 SLC39A6Q13433 755 aa17.72■□□□□ 0.43
DNMT3A-214ENST00000491288 CICQ96RK0 1608 aaPredicted RBP17.72■□□□□ 0.43
DNMT3A-214ENST00000491288 CEP350Q5VT06 3117 aa17.71■□□□□ 0.43
DNMT3A-214ENST00000491288 COL5A3P25940 1745 aaPredicted RBP17.7■□□□□ 0.42
DNMT3A-214ENST00000491288 ZNF790Q6PG37 636 aa17.7■□□□□ 0.42
DNMT3A-214ENST00000491288 GPBP1L1Q9HC44 474 aaPredicted RBP17.7■□□□□ 0.42
DNMT3A-214ENST00000491288 DLG5Q8TDM6 1919 aa17.69■□□□□ 0.42
DNMT3A-214ENST00000491288 RFC4P35249 363 aa17.69■□□□□ 0.42
DNMT3A-214ENST00000491288 CRKLP46109 303 aaKnown RBP17.69■□□□□ 0.42
DNMT3A-214ENST00000491288 ADAMTS7Q9UKP4 1686 aa17.68■□□□□ 0.42
DNMT3A-214ENST00000491288 KIF13BQ9NQT8 1826 aa17.68■□□□□ 0.42
DNMT3A-214ENST00000491288 INTS5Q6P9B9 1019 aaKnown RBP17.68■□□□□ 0.42
DNMT3A-214ENST00000491288 FMNL2Q96PY5 1086 aa17.68■□□□□ 0.42
DNMT3A-214ENST00000491288 TEX13AQ9BXU3 409 aaPredicted RBP17.68■□□□□ 0.42
DNMT3A-214ENST00000491288 KIAA1551Q9HCM1 1747 aa17.68■□□□□ 0.42
DNMT3A-214ENST00000491288 WWC3Q9ULE0 1092 aa17.68■□□□□ 0.42
DNMT3A-214ENST00000491288 MRC1P22897 1456 aa17.68■□□□□ 0.42
DNMT3A-214ENST00000491288 A0A0G2JLW4 131 aa17.67■□□□□ 0.42
DNMT3A-214ENST00000491288 KCNA3P22001 575 aa17.67■□□□□ 0.42
DNMT3A-214ENST00000491288 CALD1Q05682 793 aaKnown RBP17.67■□□□□ 0.42
DNMT3A-214ENST00000491288 VSIG10Q8N0Z9 540 aa17.67■□□□□ 0.42
DNMT3A-214ENST00000491288 THUMPD2Q9BTF0 503 aaKnown RBP17.67■□□□□ 0.42
DNMT3A-214ENST00000491288 CCDC87Q9NVE4 849 aa17.67■□□□□ 0.42
DNMT3A-214ENST00000491288 USP42Q9H9J4 1324 aaKnown RBP17.67■□□□□ 0.42
DNMT3A-214ENST00000491288 MIER1Q8N108 512 aa17.66■□□□□ 0.42
DNMT3A-214ENST00000491288 MIS18AQ9NYP9 233 aa17.66■□□□□ 0.42
DNMT3A-214ENST00000491288 MYH14Q7Z406 1995 aaKnown RBP17.66■□□□□ 0.42
DNMT3A-214ENST00000491288 STARD3NLO95772 234 aa17.65■□□□□ 0.42
DNMT3A-214ENST00000491288 DPEP1P16444 411 aa17.65■□□□□ 0.42
DNMT3A-214ENST00000491288 BABAM1Q9NWV8 329 aa17.65■□□□□ 0.42
DNMT3A-214ENST00000491288 TRIM35Q9UPQ4 493 aa17.65■□□□□ 0.42
DNMT3A-214ENST00000491288 LAS1LQ9Y4W2 734 aaKnown RBP17.65■□□□□ 0.42
DNMT3A-214ENST00000491288 PARP3Q9Y6F1 533 aa17.65■□□□□ 0.42
DNMT3A-214ENST00000491288 C4AP0C0L4 1744 aa17.64■□□□□ 0.41
DNMT3A-214ENST00000491288 KIF3CO14782 793 aa17.64■□□□□ 0.41
DNMT3A-214ENST00000491288 TM4SF1P30408 202 aa17.64■□□□□ 0.41
DNMT3A-214ENST00000491288 FKBP8Q14318 412 aa17.64■□□□□ 0.41
DNMT3A-214ENST00000491288 ZNF496Q96IT1 587 aaPredicted RBP17.64■□□□□ 0.41
DNMT3A-214ENST00000491288 SRP68Q9UHB9 627 aaKnown RBP17.64■□□□□ 0.41
DNMT3A-214ENST00000491288 TSPYL4Q9UJ04 414 aa17.64■□□□□ 0.41
DNMT3A-214ENST00000491288 KCNQ3O43525 872 aa17.63■□□□□ 0.41
DNMT3A-214ENST00000491288 DDR1Q08345 913 aa17.63■□□□□ 0.41
DNMT3A-214ENST00000491288 DNAJC10Q8IXB1 793 aa17.63■□□□□ 0.41
DNMT3A-214ENST00000491288 BCS1LQ9Y276 419 aa17.63■□□□□ 0.41
DNMT3A-214ENST00000491288 TJP1Q07157 1748 aa17.62■□□□□ 0.41
DNMT3A-214ENST00000491288 SNRPA1P09661 255 aaKnown RBP17.62■□□□□ 0.41
DNMT3A-214ENST00000491288 CYP19A1P11511 503 aaPredicted RBP17.62■□□□□ 0.41
DNMT3A-214ENST00000491288 NGEFQ8N5V2 710 aa17.62■□□□□ 0.41
DNMT3A-214ENST00000491288 SOS1Q07889 1333 aaPredicted RBP17.62■□□□□ 0.41
DNMT3A-214ENST00000491288 HEG1Q9ULI3 1381 aa17.62■□□□□ 0.41
DNMT3A-214ENST00000491288 SIPA1L3O60292 1781 aaPredicted RBP17.61■□□□□ 0.41
DNMT3A-214ENST00000491288 HSPA6P17066 643 aa17.61■□□□□ 0.41
DNMT3A-214ENST00000491288 NCBP3Q53F19 620 aaKnown RBP17.61■□□□□ 0.41
DNMT3A-214ENST00000491288 NPM2Q86SE8 214 aaKnown RBP17.61■□□□□ 0.41
DNMT3A-214ENST00000491288 ZNF526Q8TF50 670 aaPredicted RBP17.61■□□□□ 0.41
DNMT3A-214ENST00000491288 SALL2Q9Y467 1007 aaPredicted RBP17.61■□□□□ 0.41
DNMT3A-214ENST00000491288 POLRMTO00411 1230 aaKnown RBP17.6■□□□□ 0.41
DNMT3A-214ENST00000491288 GNAI1P63096 354 aa17.6■□□□□ 0.41
DNMT3A-214ENST00000491288 CCDC27Q2M243 656 aa17.6■□□□□ 0.41
DNMT3A-214ENST00000491288 KCPQ6ZWJ8 1503 aa17.6■□□□□ 0.41
DNMT3A-214ENST00000491288 CFAP44Q96MT7 982 aa17.59■□□□□ 0.41
DNMT3A-214ENST00000491288 PIM2Q9P1W9 311 aa17.59■□□□□ 0.41
DNMT3A-214ENST00000491288 CHL1O00533 1208 aa17.58■□□□□ 0.4
DNMT3A-214ENST00000491288 EIF4A1P60842 406 aaKnown RBP17.58■□□□□ 0.4
DNMT3A-214ENST00000491288 NARFQ9UHQ1 456 aa17.58■□□□□ 0.4
DNMT3A-214ENST00000491288 USPL1Q5W0Q7 1092 aa17.57■□□□□ 0.4
DNMT3A-214ENST00000491288 ARHGAP27Q6ZUM4 889 aa17.57■□□□□ 0.4
DNMT3A-214ENST00000491288 WWC1Q8IX03 1113 aa17.57■□□□□ 0.4
DNMT3A-214ENST00000491288 BCL2L12Q9HB09 334 aa17.57■□□□□ 0.4
DNMT3A-214ENST00000491288 N4BP2Q86UW6 1770 aaPredicted RBP17.56■□□□□ 0.4
DNMT3A-214ENST00000491288 CANXP27824 592 aaKnown RBP17.56■□□□□ 0.4
DNMT3A-214ENST00000491288 IFT57Q9NWB7 429 aa17.56■□□□□ 0.4
DNMT3A-214ENST00000491288 ZBTB1Q9Y2K1 713 aa17.56■□□□□ 0.4
DNMT3A-214ENST00000491288 USP16Q9Y5T5 823 aa17.56■□□□□ 0.4
DNMT3A-214ENST00000491288 BRCA1P38398 1863 aaKnown RBP17.55■□□□□ 0.4
DNMT3A-214ENST00000491288 ZPR1O75312 459 aa17.55■□□□□ 0.4
DNMT3A-214ENST00000491288 NFIXQ14938 502 aa17.55■□□□□ 0.4
DNMT3A-214ENST00000491288 DALRD3Q5D0E6 543 aaKnown RBP17.55■□□□□ 0.4
DNMT3A-214ENST00000491288 UBR2Q8IWV8 1755 aa17.55■□□□□ 0.4
DNMT3A-214ENST00000491288 COL15A1P39059 1388 aa17.54■□□□□ 0.4
DNMT3A-214ENST00000491288 A0A087WZG4 1122 aa17.54■□□□□ 0.4
DNMT3A-214ENST00000491288 TOMM70O94826 608 aa17.54■□□□□ 0.4
DNMT3A-214ENST00000491288 WDR63Q8IWG1 891 aa17.54■□□□□ 0.4
DNMT3A-214ENST00000491288 A1BGP04217 495 aa17.53■□□□□ 0.4
DNMT3A-214ENST00000491288 CHRNA5P30532 468 aa17.53■□□□□ 0.4
DNMT3A-214ENST00000491288 EIF5P55010 431 aaKnown RBP17.53■□□□□ 0.4
DNMT3A-214ENST00000491288 C9orf131Q5VYM1 1079 aa17.53■□□□□ 0.4
DNMT3A-214ENST00000491288 ZNF330Q9Y3S2 320 aaPredicted RBP17.53■□□□□ 0.4
DNMT3A-214ENST00000491288 MBIPQ9NS73 344 aa17.52■□□□□ 0.4
DNMT3A-214ENST00000491288 IL16Q14005 1332 aa17.51■□□□□ 0.39
DNMT3A-214ENST00000491288 PRAMEF22A3QJZ6 481 aa17.51■□□□□ 0.39
DNMT3A-214ENST00000491288 ZNF853P0CG23 659 aa17.51■□□□□ 0.39
DNMT3A-214ENST00000491288 EIF2S2P20042 333 aaKnown RBP17.51■□□□□ 0.39
DNMT3A-214ENST00000491288 IL6STP40189 918 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms