RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 NRXN2Q9P2S2 1712 aa19.23■□□□□ 0.67
EXOSC3-207ENST00000490516 TESK2Q96S53 571 aa19.23■□□□□ 0.67
EXOSC3-207ENST00000490516 ANKRD26Q9UPS8 1709 aa19.22■□□□□ 0.67
EXOSC3-207ENST00000490516 PPM1GO15355 546 aaPredicted RBP19.22■□□□□ 0.67
EXOSC3-207ENST00000490516 HSPA8P11142 646 aaKnown RBP19.22■□□□□ 0.67
EXOSC3-207ENST00000490516 TTLL6Q8N841 843 aa19.22■□□□□ 0.67
EXOSC3-207ENST00000490516 PASKQ96RG2 1323 aa19.22■□□□□ 0.67
EXOSC3-207ENST00000490516 CCDC85CA6NKD9 419 aa19.21■□□□□ 0.67
EXOSC3-207ENST00000490516 ERVV-2B6SEH9 535 aa19.21■□□□□ 0.67
EXOSC3-207ENST00000490516 PTCD1O75127 700 aaKnown RBP19.21■□□□□ 0.67
EXOSC3-207ENST00000490516 FER1L6Q2WGJ9 1857 aa19.21■□□□□ 0.67
EXOSC3-207ENST00000490516 RGS19P49795 217 aa19.19■□□□□ 0.66
EXOSC3-207ENST00000490516 ERFEQ4G0M1 354 aa19.19■□□□□ 0.66
EXOSC3-207ENST00000490516 USPL1Q5W0Q7 1092 aa19.19■□□□□ 0.66
EXOSC3-207ENST00000490516 DDNO94850 711 aaPredicted RBP19.18■□□□□ 0.66
EXOSC3-207ENST00000490516 ST20-MTHFSA0A0A6YYL1 179 aa19.17■□□□□ 0.66
EXOSC3-207ENST00000490516 TMEM88BA6NKF7 163 aa19.17■□□□□ 0.66
EXOSC3-207ENST00000490516 NFIXQ14938 502 aa19.17■□□□□ 0.66
EXOSC3-207ENST00000490516 C2CD5Q86YS7 1000 aa19.17■□□□□ 0.66
EXOSC3-207ENST00000490516 ZPR1O75312 459 aa19.16■□□□□ 0.66
EXOSC3-207ENST00000490516 CABP4P57796 275 aa19.16■□□□□ 0.66
EXOSC3-207ENST00000490516 INTS5Q6P9B9 1019 aaKnown RBP19.16■□□□□ 0.66
EXOSC3-207ENST00000490516 ZNF219Q9P2Y4 722 aaPredicted RBP19.16■□□□□ 0.66
EXOSC3-207ENST00000490516 WASHC2AQ641Q2 1341 aa19.16■□□□□ 0.66
EXOSC3-207ENST00000490516 SCN4AP35499 1836 aa19.15■□□□□ 0.66
EXOSC3-207ENST00000490516 ANKRD31Q8N7Z5 1873 aa19.15■□□□□ 0.66
EXOSC3-207ENST00000490516 CARMIL3Q8ND23 1372 aa19.15■□□□□ 0.66
EXOSC3-207ENST00000490516 LDHDQ86WU2 507 aa19.14■□□□□ 0.65
EXOSC3-207ENST00000490516 CACNA1SQ13698 1873 aa19.14■□□□□ 0.65
EXOSC3-207ENST00000490516 H0YIN7 160 aa19.13■□□□□ 0.65
EXOSC3-207ENST00000490516 C21orf2O43822 256 aa19.13■□□□□ 0.65
EXOSC3-207ENST00000490516 ITGBL1O95965 494 aaPredicted RBP19.13■□□□□ 0.65
EXOSC3-207ENST00000490516 SERPINB2P05120 415 aa19.13■□□□□ 0.65
EXOSC3-207ENST00000490516 TNRC18O15417 2968 aaPredicted RBP19.13■□□□□ 0.65
EXOSC3-207ENST00000490516 HSP90AB1P08238 724 aaKnown RBP19.12■□□□□ 0.65
EXOSC3-207ENST00000490516 COL11A2P13942 1736 aaPredicted RBP19.11■□□□□ 0.65
EXOSC3-207ENST00000490516 DEFB115Q30KQ5 88 aa19.11■□□□□ 0.65
EXOSC3-207ENST00000490516 SOS1Q07889 1333 aaPredicted RBP19.1■□□□□ 0.65
EXOSC3-207ENST00000490516 WDR33Q9C0J8 1336 aaKnown RBP19.1■□□□□ 0.65
EXOSC3-207ENST00000490516 RASSF10A6NK89 507 aa19.1■□□□□ 0.65
EXOSC3-207ENST00000490516 MAP2K1Q02750 393 aaPredicted RBP19.1■□□□□ 0.65
EXOSC3-207ENST00000490516 NFATC2IPQ8NCF5 419 aa19.1■□□□□ 0.65
EXOSC3-207ENST00000490516 ZNF622Q969S3 477 aaKnown RBP eCLIP19.1■□□□□ 0.65
EXOSC3-207ENST00000490516 TAF1DQ9H5J8 278 aaPredicted RBP19.1■□□□□ 0.65
EXOSC3-207ENST00000490516 BCL2L12Q9HB09 334 aa19.1■□□□□ 0.65
EXOSC3-207ENST00000490516 ZNF530Q6P9A1 599 aaPredicted RBP19.09■□□□□ 0.65
EXOSC3-207ENST00000490516 NARFQ9UHQ1 456 aa19.09■□□□□ 0.65
EXOSC3-207ENST00000490516 ADAMTSL1Q8N6G6 1762 aa19.09■□□□□ 0.65
EXOSC3-207ENST00000490516 IQCA1LA6NCM1 817 aa19.08■□□□□ 0.64
EXOSC3-207ENST00000490516 EIF4A2Q14240 407 aaKnown RBP19.08■□□□□ 0.64
EXOSC3-207ENST00000490516 EAPPQ56P03 285 aaPredicted RBP19.08■□□□□ 0.64
EXOSC3-207ENST00000490516 DNAJC10Q8IXB1 793 aa19.08■□□□□ 0.64
EXOSC3-207ENST00000490516 CFAP44Q96MT7 982 aa19.08■□□□□ 0.64
EXOSC3-207ENST00000490516 CARD14Q9BXL6 1004 aa19.08■□□□□ 0.64
EXOSC3-207ENST00000490516 SLX4Q8IY92 1834 aa19.08■□□□□ 0.64
EXOSC3-207ENST00000490516 TAOK3Q9H2K8 898 aa19.07■□□□□ 0.64
EXOSC3-207ENST00000490516 COL15A1P39059 1388 aa19.06■□□□□ 0.64
EXOSC3-207ENST00000490516 LTBP3Q9NS15 1303 aa19.06■□□□□ 0.64
EXOSC3-207ENST00000490516 MTHFSP49914 203 aa19.06■□□□□ 0.64
EXOSC3-207ENST00000490516 PLEKHO1Q53GL0 409 aaPredicted RBP19.06■□□□□ 0.64
EXOSC3-207ENST00000490516 L3MBTL3Q96JM7 780 aaPredicted RBP19.06■□□□□ 0.64
EXOSC3-207ENST00000490516 POLKQ9UBT6 870 aa19.06■□□□□ 0.64
EXOSC3-207ENST00000490516 CLEC11AQ9Y240 323 aa19.06■□□□□ 0.64
EXOSC3-207ENST00000490516 THSD7BQ9C0I4 1608 aa19.06■□□□□ 0.64
EXOSC3-207ENST00000490516 PDE4DIPQ5VU43 2346 aa19.05■□□□□ 0.64
EXOSC3-207ENST00000490516 SLC24A1O60721 1099 aa19.05■□□□□ 0.64
EXOSC3-207ENST00000490516 BICDL1Q6ZP65 573 aa19.05■□□□□ 0.64
EXOSC3-207ENST00000490516 SCN11AQ9UI33 1791 aa19.05■□□□□ 0.64
EXOSC3-207ENST00000490516 CCDC24Q8N4L8 307 aa19.04■□□□□ 0.64
EXOSC3-207ENST00000490516 ABT1Q9ULW3 272 aaKnown RBP19.04■□□□□ 0.64
EXOSC3-207ENST00000490516 CYP19A1P11511 503 aaPredicted RBP19.03■□□□□ 0.64
EXOSC3-207ENST00000490516 MAP1SQ66K74 1059 aaPredicted RBP19.03■□□□□ 0.64
EXOSC3-207ENST00000490516 TSKSQ9UJT2 592 aa19.03■□□□□ 0.64
EXOSC3-207ENST00000490516 ARFGEF2Q9Y6D5 1785 aa19.03■□□□□ 0.64
EXOSC3-207ENST00000490516 CASP8AP2Q9UKL3 1982 aa19.02■□□□□ 0.64
EXOSC3-207ENST00000490516 CNTROBQ8N137 903 aa19.02■□□□□ 0.64
EXOSC3-207ENST00000490516 ZBTB1Q9Y2K1 713 aa19.02■□□□□ 0.64
EXOSC3-207ENST00000490516 ZNF541Q9H0D2 1346 aa19■□□□□ 0.63
EXOSC3-207ENST00000490516 EPHX2P34913 555 aa19■□□□□ 0.63
EXOSC3-207ENST00000490516 PDE6BP35913 854 aa19■□□□□ 0.63
EXOSC3-207ENST00000490516 GRM1Q13255 1194 aa19■□□□□ 0.63
EXOSC3-207ENST00000490516 AMOTQ4VCS5 1084 aa19■□□□□ 0.63
EXOSC3-207ENST00000490516 C1orf141Q5JVX7 400 aa19■□□□□ 0.63
EXOSC3-207ENST00000490516 BEGAINQ9BUH8 593 aa19■□□□□ 0.63
EXOSC3-207ENST00000490516 MCOLN1Q9GZU1 580 aa19■□□□□ 0.63
EXOSC3-207ENST00000490516 HACL1Q9UJ83 578 aa19■□□□□ 0.63
EXOSC3-207ENST00000490516 LTBP1Q14766 1721 aa19■□□□□ 0.63
EXOSC3-207ENST00000490516 PAXIP1Q6ZW49 1069 aaPredicted RBP18.99■□□□□ 0.63
EXOSC3-207ENST00000490516 CAPNS2Q96L46 248 aa18.99■□□□□ 0.63
EXOSC3-207ENST00000490516 BRIP1Q9BX63 1249 aa18.99■□□□□ 0.63
EXOSC3-207ENST00000490516 TNNT2P45379 298 aaPredicted RBP18.98■□□□□ 0.63
EXOSC3-207ENST00000490516 TBC1D9BQ66K14 1250 aa18.98■□□□□ 0.63
EXOSC3-207ENST00000490516 PDZRN3Q9UPQ7 1066 aa18.98■□□□□ 0.63
EXOSC3-207ENST00000490516 FMR1Q06787 632 aaKnown RBP eCLIP18.97■□□□□ 0.63
EXOSC3-207ENST00000490516 PRR5LQ6MZQ0 368 aa18.97■□□□□ 0.63
EXOSC3-207ENST00000490516 CYP4F22Q6NT55 531 aa18.97■□□□□ 0.63
EXOSC3-207ENST00000490516 PRPF40BQ6NWY9 871 aaKnown RBP18.97■□□□□ 0.63
EXOSC3-207ENST00000490516 GPR101Q96P66 508 aaPredicted RBP18.97■□□□□ 0.63
EXOSC3-207ENST00000490516 RNF123Q5XPI4 1314 aa18.97■□□□□ 0.63
EXOSC3-207ENST00000490516 TRPM7Q96QT4 1865 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms