RNA–Protein interactions for RNA: ENST00000488253.5

PLSCR1-215, Transcript of phospholipid scramblase 1, humanhuman

TSL 3

Gene PLSCR1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLSCR1-215ENST00000488253 UBR2Q8IWV8 1755 aa17.68■□□□□ 0.42
PLSCR1-215ENST00000488253 BTBD11A6QL63 1104 aa17.67■□□□□ 0.42
PLSCR1-215ENST00000488253 TGFB2P61812 414 aa17.67■□□□□ 0.42
PLSCR1-215ENST00000488253 FMNL2Q96PY5 1086 aa17.67■□□□□ 0.42
PLSCR1-215ENST00000488253 SOS1Q07889 1333 aaPredicted RBP17.67■□□□□ 0.42
PLSCR1-215ENST00000488253 COL15A1P39059 1388 aa17.66■□□□□ 0.42
PLSCR1-215ENST00000488253 CANXP27824 592 aaKnown RBP17.66■□□□□ 0.42
PLSCR1-215ENST00000488253 USPL1Q5W0Q7 1092 aa17.66■□□□□ 0.42
PLSCR1-215ENST00000488253 PNNQ9H307 717 aaKnown RBP17.66■□□□□ 0.42
PLSCR1-215ENST00000488253 ZBTB1Q9Y2K1 713 aa17.66■□□□□ 0.42
PLSCR1-215ENST00000488253 FKBP8Q14318 412 aa17.65■□□□□ 0.42
PLSCR1-215ENST00000488253 ZNF496Q96IT1 587 aaPredicted RBP17.65■□□□□ 0.42
PLSCR1-215ENST00000488253 SIPA1L3O60292 1781 aaPredicted RBP17.65■□□□□ 0.42
PLSCR1-215ENST00000488253 CEMIPQ8WUJ3 1361 aa17.65■□□□□ 0.42
PLSCR1-215ENST00000488253 HEG1Q9ULI3 1381 aa17.65■□□□□ 0.42
PLSCR1-215ENST00000488253 KIF13BQ9NQT8 1826 aa17.64■□□□□ 0.41
PLSCR1-215ENST00000488253 A0A087WZG4 1122 aa17.64■□□□□ 0.41
PLSCR1-215ENST00000488253 NARFQ9UHQ1 456 aa17.64■□□□□ 0.41
PLSCR1-215ENST00000488253 ZNF330Q9Y3S2 320 aaPredicted RBP17.64■□□□□ 0.41
PLSCR1-215ENST00000488253 C10orf71Q711Q0 1435 aa17.64■□□□□ 0.41
PLSCR1-215ENST00000488253 HTATSF1O43719 755 aaKnown RBP17.63■□□□□ 0.41
PLSCR1-215ENST00000488253 DDX10Q13206 875 aaKnown RBP17.63■□□□□ 0.41
PLSCR1-215ENST00000488253 RALBP1Q15311 655 aa17.63■□□□□ 0.41
PLSCR1-215ENST00000488253 MCM10Q7L590 875 aa17.63■□□□□ 0.41
PLSCR1-215ENST00000488253 U3KPZ7 1027 aaPredicted RBP17.63■□□□□ 0.41
PLSCR1-215ENST00000488253 MAPK8IP3Q9UPT6 1336 aa17.63■□□□□ 0.41
PLSCR1-215ENST00000488253 PXDNLA1KZ92 1463 aa17.63■□□□□ 0.41
PLSCR1-215ENST00000488253 N4BP2Q86UW6 1770 aaPredicted RBP17.62■□□□□ 0.41
PLSCR1-215ENST00000488253 A0A0G2JLW4 131 aa17.62■□□□□ 0.41
PLSCR1-215ENST00000488253 BCS1LQ9Y276 419 aa17.62■□□□□ 0.41
PLSCR1-215ENST00000488253 DPEP1P16444 411 aa17.6■□□□□ 0.41
PLSCR1-215ENST00000488253 DDR1Q08345 913 aa17.6■□□□□ 0.41
PLSCR1-215ENST00000488253 POLRMTO00411 1230 aaKnown RBP17.59■□□□□ 0.41
PLSCR1-215ENST00000488253 DCTN1Q14203 1278 aa17.59■□□□□ 0.41
PLSCR1-215ENST00000488253 UTRNP46939 3433 aa17.58■□□□□ 0.41
PLSCR1-215ENST00000488253 KCNQ3O43525 872 aa17.58■□□□□ 0.4
PLSCR1-215ENST00000488253 TM4SF1P30408 202 aa17.58■□□□□ 0.4
PLSCR1-215ENST00000488253 IL6STP40189 918 aaPredicted RBP17.58■□□□□ 0.4
PLSCR1-215ENST00000488253 EIF5P55010 431 aaKnown RBP17.58■□□□□ 0.4
PLSCR1-215ENST00000488253 PIM2Q9P1W9 311 aa17.58■□□□□ 0.4
PLSCR1-215ENST00000488253 GIGYF1O75420 1035 aaPredicted RBP17.57■□□□□ 0.4
PLSCR1-215ENST00000488253 SNRPA1P09661 255 aaKnown RBP17.57■□□□□ 0.4
PLSCR1-215ENST00000488253 NFIXQ14938 502 aa17.57■□□□□ 0.4
PLSCR1-215ENST00000488253 TAF7Q15545 349 aaPredicted RBP17.57■□□□□ 0.4
PLSCR1-215ENST00000488253 POTEHQ6S545 545 aa17.57■□□□□ 0.4
PLSCR1-215ENST00000488253 BICDL1Q6ZP65 573 aa17.57■□□□□ 0.4
PLSCR1-215ENST00000488253 PNISRQ8TF01 805 aaKnown RBP17.57■□□□□ 0.4
PLSCR1-215ENST00000488253 KIAA1551Q9HCM1 1747 aa17.57■□□□□ 0.4
PLSCR1-215ENST00000488253 NFE2L2Q16236 605 aa17.56■□□□□ 0.4
PLSCR1-215ENST00000488253 MYBBP1AQ9BQG0 1328 aaKnown RBP17.55■□□□□ 0.4
PLSCR1-215ENST00000488253 NPHP1O15259 732 aa17.55■□□□□ 0.4
PLSCR1-215ENST00000488253 A1BGP04217 495 aa17.55■□□□□ 0.4
PLSCR1-215ENST00000488253 SERPINB2P05120 415 aa17.55■□□□□ 0.4
PLSCR1-215ENST00000488253 DSG3P32926 999 aa17.55■□□□□ 0.4
PLSCR1-215ENST00000488253 ARHGAP27Q6ZUM4 889 aa17.55■□□□□ 0.4
PLSCR1-215ENST00000488253 TBC1D2BQ9UPU7 963 aa17.55■□□□□ 0.4
PLSCR1-215ENST00000488253 ATP10DQ9P241 1426 aa17.55■□□□□ 0.4
PLSCR1-215ENST00000488253 DLG5Q8TDM6 1919 aa17.55■□□□□ 0.4
PLSCR1-215ENST00000488253 DALRD3Q5D0E6 543 aaKnown RBP17.54■□□□□ 0.4
PLSCR1-215ENST00000488253 PLEKHF1Q96S99 279 aa17.54■□□□□ 0.4
PLSCR1-215ENST00000488253 SPINK5Q9NQ38 1064 aaPredicted RBP17.54■□□□□ 0.4
PLSCR1-215ENST00000488253 DZIP3Q86Y13 1208 aaKnown RBP17.53■□□□□ 0.4
PLSCR1-215ENST00000488253 BCL2L12Q9HB09 334 aa17.53■□□□□ 0.4
PLSCR1-215ENST00000488253 GPBP1L1Q9HC44 474 aaPredicted RBP17.53■□□□□ 0.4
PLSCR1-215ENST00000488253 USP16Q9Y5T5 823 aa17.53■□□□□ 0.4
PLSCR1-215ENST00000488253 GOLGB1Q14789 3259 aaKnown RBP17.52■□□□□ 0.4
PLSCR1-215ENST00000488253 SCN7AQ01118 1682 aa17.52■□□□□ 0.4
PLSCR1-215ENST00000488253 AFDNP55196 1824 aaKnown RBP17.52■□□□□ 0.4
PLSCR1-215ENST00000488253 CHRNA5P30532 468 aa17.52■□□□□ 0.4
PLSCR1-215ENST00000488253 WDR43Q15061 677 aaKnown RBP eCLIP17.52■□□□□ 0.4
PLSCR1-215ENST00000488253 ZNF526Q8TF50 670 aaPredicted RBP17.52■□□□□ 0.4
PLSCR1-215ENST00000488253 BRCA1P38398 1863 aaKnown RBP17.52■□□□□ 0.39
PLSCR1-215ENST00000488253 TBC1D9BQ66K14 1250 aa17.51■□□□□ 0.39
PLSCR1-215ENST00000488253 SETDB2Q96T68 719 aa17.51■□□□□ 0.39
PLSCR1-215ENST00000488253 MIS18AQ9NYP9 233 aa17.51■□□□□ 0.39
PLSCR1-215ENST00000488253 ZNF652Q9Y2D9 606 aa17.51■□□□□ 0.39
PLSCR1-215ENST00000488253 ARFGEF1Q9Y6D6 1849 aa17.5■□□□□ 0.39
PLSCR1-215ENST00000488253 PRAMEF22A3QJZ6 481 aa17.5■□□□□ 0.39
PLSCR1-215ENST00000488253 KCNA3P22001 575 aa17.5■□□□□ 0.39
PLSCR1-215ENST00000488253 PIP4K2AP48426 406 aaPredicted RBP17.5■□□□□ 0.39
PLSCR1-215ENST00000488253 C1QTNF8P60827 252 aa17.5■□□□□ 0.39
PLSCR1-215ENST00000488253 LMOD3Q0VAK6 560 aa17.5■□□□□ 0.39
PLSCR1-215ENST00000488253 CARMIL3Q8ND23 1372 aa17.5■□□□□ 0.39
PLSCR1-215ENST00000488253 NRXN2Q9P2S2 1712 aa17.5■□□□□ 0.39
PLSCR1-215ENST00000488253 H0YIN7 160 aa17.49■□□□□ 0.39
PLSCR1-215ENST00000488253 ZEB1P37275 1124 aaPredicted RBP17.49■□□□□ 0.39
PLSCR1-215ENST00000488253 RIPK4P57078 832 aa17.49■□□□□ 0.39
PLSCR1-215ENST00000488253 C2CD5Q86YS7 1000 aa17.49■□□□□ 0.39
PLSCR1-215ENST00000488253 CAMTA2O94983 1202 aa17.48■□□□□ 0.39
PLSCR1-215ENST00000488253 THUMPD2Q9BTF0 503 aaKnown RBP17.48■□□□□ 0.39
PLSCR1-215ENST00000488253 PDZRN3Q9UPQ7 1066 aa17.48■□□□□ 0.39
PLSCR1-215ENST00000488253 ADCY9O60503 1353 aa17.48■□□□□ 0.39
PLSCR1-215ENST00000488253 LAMB4A4D0S4 1761 aa17.48■□□□□ 0.39
PLSCR1-215ENST00000488253 KDM3BQ7LBC6 1761 aa17.48■□□□□ 0.39
PLSCR1-215ENST00000488253 PDE6BP35913 854 aa17.47■□□□□ 0.39
PLSCR1-215ENST00000488253 ST5P78524 1137 aa17.47■□□□□ 0.39
PLSCR1-215ENST00000488253 CNBD1Q8NA66 436 aa17.47■□□□□ 0.39
PLSCR1-215ENST00000488253 BCORQ6W2J9 1755 aa17.47■□□□□ 0.39
PLSCR1-215ENST00000488253 CLEC4GQ6UXB4 293 aa17.46■□□□□ 0.39
PLSCR1-215ENST00000488253 TTLL6Q8N841 843 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms