RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 PUS7Q96PZ0 661 aaKnown RBP21.49■■□□□ 1.03
U2AF1-211ENST00000486519 EYA1Q99502 592 aa21.49■■□□□ 1.03
U2AF1-211ENST00000486519 TNRC18O15417 2968 aaPredicted RBP21.49■■□□□ 1.03
U2AF1-211ENST00000486519 CARMIL3Q8ND23 1372 aa21.48■■□□□ 1.03
U2AF1-211ENST00000486519 TONSLQ96HA7 1378 aa21.48■■□□□ 1.03
U2AF1-211ENST00000486519 ANKRD31Q8N7Z5 1873 aa21.48■■□□□ 1.03
U2AF1-211ENST00000486519 NEUROD1Q13562 356 aa21.48■■□□□ 1.03
U2AF1-211ENST00000486519 TESK2Q96S53 571 aa21.48■■□□□ 1.03
U2AF1-211ENST00000486519 COL11A2P13942 1736 aaPredicted RBP21.46■■□□□ 1.03
U2AF1-211ENST00000486519 DDNO94850 711 aaPredicted RBP21.46■■□□□ 1.03
U2AF1-211ENST00000486519 KIF24Q5T7B8 1368 aa21.46■■□□□ 1.03
U2AF1-211ENST00000486519 CACNA1SQ13698 1873 aa21.45■■□□□ 1.02
U2AF1-211ENST00000486519 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.45■■□□□ 1.02
U2AF1-211ENST00000486519 PTCD1O75127 700 aaKnown RBP21.44■■□□□ 1.02
U2AF1-211ENST00000486519 USPL1Q5W0Q7 1092 aa21.44■■□□□ 1.02
U2AF1-211ENST00000486519 TTLL6Q8N841 843 aa21.44■■□□□ 1.02
U2AF1-211ENST00000486519 NFIXQ14938 502 aa21.43■■□□□ 1.02
U2AF1-211ENST00000486519 DPY19L2Q6NUT2 758 aa21.43■■□□□ 1.02
U2AF1-211ENST00000486519 INTS5Q6P9B9 1019 aaKnown RBP21.43■■□□□ 1.02
U2AF1-211ENST00000486519 ZNF219Q9P2Y4 722 aaPredicted RBP21.43■■□□□ 1.02
U2AF1-211ENST00000486519 ERFEQ4G0M1 354 aa21.42■■□□□ 1.02
U2AF1-211ENST00000486519 ADAMTSL1Q8N6G6 1762 aa21.42■■□□□ 1.02
U2AF1-211ENST00000486519 TMEM88BA6NKF7 163 aa21.41■■□□□ 1.02
U2AF1-211ENST00000486519 PPM1GO15355 546 aaPredicted RBP21.41■■□□□ 1.02
U2AF1-211ENST00000486519 ITGBL1O95965 494 aaPredicted RBP21.41■■□□□ 1.02
U2AF1-211ENST00000486519 C2CD5Q86YS7 1000 aa21.41■■□□□ 1.02
U2AF1-211ENST00000486519 SCN4AP35499 1836 aa21.39■■□□□ 1.02
U2AF1-211ENST00000486519 ERVV-2B6SEH9 535 aa21.39■■□□□ 1.01
U2AF1-211ENST00000486519 BCL2L12Q9HB09 334 aa21.39■■□□□ 1.01
U2AF1-211ENST00000486519 THSD7BQ9C0I4 1608 aa21.39■■□□□ 1.01
U2AF1-211ENST00000486519 SLX4Q8IY92 1834 aa21.38■■□□□ 1.01
U2AF1-211ENST00000486519 ST20-MTHFSA0A0A6YYL1 179 aa21.37■■□□□ 1.01
U2AF1-211ENST00000486519 C21orf2O43822 256 aa21.37■■□□□ 1.01
U2AF1-211ENST00000486519 SERPINB2P05120 415 aa21.36■■□□□ 1.01
U2AF1-211ENST00000486519 LDHDQ86WU2 507 aa21.36■■□□□ 1.01
U2AF1-211ENST00000486519 TAF1DQ9H5J8 278 aaPredicted RBP21.36■■□□□ 1.01
U2AF1-211ENST00000486519 SOS1Q07889 1333 aaPredicted RBP21.35■■□□□ 1.01
U2AF1-211ENST00000486519 WDR33Q9C0J8 1336 aaKnown RBP21.35■■□□□ 1.01
U2AF1-211ENST00000486519 RASSF10A6NK89 507 aa21.35■■□□□ 1.01
U2AF1-211ENST00000486519 TSKSQ9UJT2 592 aa21.35■■□□□ 1.01
U2AF1-211ENST00000486519 LTBP1Q14766 1721 aa21.35■■□□□ 1.01
U2AF1-211ENST00000486519 WASHC2AQ641Q2 1341 aa21.34■■□□□ 1.01
U2AF1-211ENST00000486519 CABP4P57796 275 aa21.34■■□□□ 1.01
U2AF1-211ENST00000486519 CCDC24Q8N4L8 307 aa21.34■■□□□ 1.01
U2AF1-211ENST00000486519 ZPR1O75312 459 aa21.33■■□□□ 1.01
U2AF1-211ENST00000486519 DEFB115Q30KQ5 88 aa21.33■■□□□ 1.01
U2AF1-211ENST00000486519 DNAJC10Q8IXB1 793 aa21.33■■□□□ 1.01
U2AF1-211ENST00000486519 CARD14Q9BXL6 1004 aa21.33■■□□□ 1.01
U2AF1-211ENST00000486519 CASP8AP2Q9UKL3 1982 aa21.32■■□□□ 1
U2AF1-211ENST00000486519 PDE4DIPQ5VU43 2346 aa21.31■■□□□ 1
U2AF1-211ENST00000486519 H0YIN7 160 aa21.31■■□□□ 1
U2AF1-211ENST00000486519 EIF4A2Q14240 407 aaKnown RBP21.31■■□□□ 1
U2AF1-211ENST00000486519 EAPPQ56P03 285 aaPredicted RBP21.31■■□□□ 1
U2AF1-211ENST00000486519 ZNF622Q969S3 477 aaKnown RBP eCLIP21.31■■□□□ 1
U2AF1-211ENST00000486519 CFAP44Q96MT7 982 aa21.31■■□□□ 1
U2AF1-211ENST00000486519 SCN11AQ9UI33 1791 aa21.31■■□□□ 1
U2AF1-211ENST00000486519 FMR1Q06787 632 aaKnown RBP eCLIP21.3■■□□□ 1
U2AF1-211ENST00000486519 NFATC2IPQ8NCF5 419 aa21.3■■□□□ 1
U2AF1-211ENST00000486519 ARFGEF2Q9Y6D5 1785 aa21.3■■□□□ 1
U2AF1-211ENST00000486519 ZNF541Q9H0D2 1346 aa21.29■■□□□ 1
U2AF1-211ENST00000486519 COL15A1P39059 1388 aa21.29■■□□□ 1
U2AF1-211ENST00000486519 MAP2K1Q02750 393 aaPredicted RBP21.29■■□□□ 1
U2AF1-211ENST00000486519 MAP1SQ66K74 1059 aaPredicted RBP21.29■■□□□ 1
U2AF1-211ENST00000486519 L3MBTL3Q96JM7 780 aaPredicted RBP21.29■■□□□ 1
U2AF1-211ENST00000486519 NARFQ9UHQ1 456 aa21.29■■□□□ 1
U2AF1-211ENST00000486519 ZNF530Q6P9A1 599 aaPredicted RBP21.28■■□□□ 1
U2AF1-211ENST00000486519 BICDL1Q6ZP65 573 aa21.28■■□□□ 1
U2AF1-211ENST00000486519 TAOK3Q9H2K8 898 aa21.28■■□□□ 1
U2AF1-211ENST00000486519 POLKQ9UBT6 870 aa21.28■■□□□ 1
U2AF1-211ENST00000486519 LTBP3Q9NS15 1303 aa21.28■■□□□ 1
U2AF1-211ENST00000486519 MCOLN1Q9GZU1 580 aa21.27■■□□□ 1
U2AF1-211ENST00000486519 ZBTB1Q9Y2K1 713 aa21.27■■□□□ 1
U2AF1-211ENST00000486519 IQCA1LA6NCM1 817 aa21.25■□□□□ 0.99
U2AF1-211ENST00000486519 HSP90AB1P08238 724 aaKnown RBP21.25■□□□□ 0.99
U2AF1-211ENST00000486519 CYP19A1P11511 503 aaPredicted RBP21.25■□□□□ 0.99
U2AF1-211ENST00000486519 ABT1Q9ULW3 272 aaKnown RBP21.25■□□□□ 0.99
U2AF1-211ENST00000486519 CLEC11AQ9Y240 323 aa21.25■□□□□ 0.99
U2AF1-211ENST00000486519 GRM1Q13255 1194 aa21.24■□□□□ 0.99
U2AF1-211ENST00000486519 CNTROBQ8N137 903 aa21.24■□□□□ 0.99
U2AF1-211ENST00000486519 MTHFSP49914 203 aa21.23■□□□□ 0.99
U2AF1-211ENST00000486519 CYP4F22Q6NT55 531 aa21.23■□□□□ 0.99
U2AF1-211ENST00000486519 CAPNS2Q96L46 248 aa21.23■□□□□ 0.99
U2AF1-211ENST00000486519 SCN7AQ01118 1682 aa21.22■□□□□ 0.99
U2AF1-211ENST00000486519 EPHX2P34913 555 aa21.22■□□□□ 0.99
U2AF1-211ENST00000486519 TRPM7Q96QT4 1865 aa21.22■□□□□ 0.99
U2AF1-211ENST00000486519 TBC1D9BQ66K14 1250 aa21.21■□□□□ 0.99
U2AF1-211ENST00000486519 AEBP1Q8IUX7 1158 aa21.21■□□□□ 0.99
U2AF1-211ENST00000486519 RNF123Q5XPI4 1314 aa21.21■□□□□ 0.99
U2AF1-211ENST00000486519 AOC2O75106 756 aa21.2■□□□□ 0.98
U2AF1-211ENST00000486519 PLEKHO1Q53GL0 409 aaPredicted RBP21.2■□□□□ 0.98
U2AF1-211ENST00000486519 PRR5LQ6MZQ0 368 aa21.2■□□□□ 0.98
U2AF1-211ENST00000486519 HACL1Q9UJ83 578 aa21.2■□□□□ 0.98
U2AF1-211ENST00000486519 SLC39A6Q13433 755 aa21.19■□□□□ 0.98
U2AF1-211ENST00000486519 PRPF40BQ6NWY9 871 aaKnown RBP21.19■□□□□ 0.98
U2AF1-211ENST00000486519 OLFM4Q6UX06 510 aa21.18■□□□□ 0.98
U2AF1-211ENST00000486519 PAXIP1Q6ZW49 1069 aaPredicted RBP21.18■□□□□ 0.98
U2AF1-211ENST00000486519 GPR101Q96P66 508 aaPredicted RBP21.18■□□□□ 0.98
U2AF1-211ENST00000486519 BRIP1Q9BX63 1249 aa21.18■□□□□ 0.98
U2AF1-211ENST00000486519 DDX21Q9NR30 783 aaKnown RBP eCLIP21.18■□□□□ 0.98
U2AF1-211ENST00000486519 TNNT2P45379 298 aaPredicted RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms