RNA–Protein interactions for RNA: ENST00000480242.1

SNRNP200-203, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 3,409 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-203ENST00000480242 C4AP0C0L4 1744 aa10.39□□□□□ -0.75
SNRNP200-203ENST00000480242 C4BP0C0L5 1744 aa10.39□□□□□ -0.75
SNRNP200-203ENST00000480242 PLCD3Q8N3E9 789 aa10.39□□□□□ -0.75
SNRNP200-203ENST00000480242 GAS2L2Q8NHY3 880 aa10.39□□□□□ -0.75
SNRNP200-203ENST00000480242 WWC1Q8IX03 1113 aa10.39□□□□□ -0.75
SNRNP200-203ENST00000480242 ATP2B3Q16720 1220 aa10.38□□□□□ -0.75
SNRNP200-203ENST00000480242 CCDC39Q9UFE4 941 aa10.38□□□□□ -0.75
SNRNP200-203ENST00000480242 K7ELQ4 463 aaPredicted RBP10.38□□□□□ -0.75
SNRNP200-203ENST00000480242 PDLIM2Q96JY6 352 aa10.38□□□□□ -0.75
SNRNP200-203ENST00000480242 GTPBP4Q9BZE4 634 aaKnown RBP10.38□□□□□ -0.75
SNRNP200-203ENST00000480242 ZBTB22O15209 634 aa10.38□□□□□ -0.75
SNRNP200-203ENST00000480242 KIF20AO95235 890 aa10.38□□□□□ -0.75
SNRNP200-203ENST00000480242 ZNF445P59923 1031 aa10.38□□□□□ -0.75
SNRNP200-203ENST00000480242 NME9Q86XW9 330 aa10.38□□□□□ -0.75
SNRNP200-203ENST00000480242 THUMPD2Q9BTF0 503 aaKnown RBP10.38□□□□□ -0.75
SNRNP200-203ENST00000480242 CGNQ9P2M7 1197 aaKnown RBP10.38□□□□□ -0.75
SNRNP200-203ENST00000480242 TSR2Q969E8 191 aaKnown RBP10.37□□□□□ -0.75
SNRNP200-203ENST00000480242 LRRC37AA6NMS7 1700 aa10.37□□□□□ -0.75
SNRNP200-203ENST00000480242 PRPF40AO75400 957 aaKnown RBP10.37□□□□□ -0.75
SNRNP200-203ENST00000480242 RBM25P49756 843 aaKnown RBP10.37□□□□□ -0.75
SNRNP200-203ENST00000480242 LNPKQ9C0E8 428 aa10.37□□□□□ -0.75
SNRNP200-203ENST00000480242 DLEC1Q9Y238 1755 aa10.36□□□□□ -0.75
SNRNP200-203ENST00000480242 LETM1O95202 739 aaPredicted RBP10.36□□□□□ -0.75
SNRNP200-203ENST00000480242 CADPS2Q86UW7 1296 aa10.36□□□□□ -0.75
SNRNP200-203ENST00000480242 ZNF710Q8N1W2 664 aa10.36□□□□□ -0.75
SNRNP200-203ENST00000480242 MYRIPQ8NFW9 859 aa10.36□□□□□ -0.75
SNRNP200-203ENST00000480242 TMEM51Q9NW97 253 aa10.36□□□□□ -0.75
SNRNP200-203ENST00000480242 KIAA0232Q92628 1395 aa10.36□□□□□ -0.75
SNRNP200-203ENST00000480242 SYCE3A1L190 88 aa10.36□□□□□ -0.75
SNRNP200-203ENST00000480242 KIAA2012Q0VF49 1180 aa10.36□□□□□ -0.75
SNRNP200-203ENST00000480242 BRINP3Q76B58 766 aa10.36□□□□□ -0.75
SNRNP200-203ENST00000480242 KIF13BQ9NQT8 1826 aa10.36□□□□□ -0.75
SNRNP200-203ENST00000480242 HTATSF1O43719 755 aaKnown RBP10.36□□□□□ -0.75
SNRNP200-203ENST00000480242 MVPQ14764 893 aaKnown RBP10.36□□□□□ -0.75
SNRNP200-203ENST00000480242 ARHGEF25Q86VW2 580 aa10.36□□□□□ -0.75
SNRNP200-203ENST00000480242 ZNF830Q96NB3 372 aaPredicted RBP10.36□□□□□ -0.75
SNRNP200-203ENST00000480242 MEGF6O75095 1541 aa10.35□□□□□ -0.75
SNRNP200-203ENST00000480242 CDK11BP21127 795 aaKnown RBP10.35□□□□□ -0.75
SNRNP200-203ENST00000480242 ITPRIPQ8IWB1 547 aa10.35□□□□□ -0.75
SNRNP200-203ENST00000480242 COG3Q96JB2 828 aa10.35□□□□□ -0.75
SNRNP200-203ENST00000480242 ATRNO75882 1429 aa10.35□□□□□ -0.75
SNRNP200-203ENST00000480242 MCM5P33992 734 aa10.35□□□□□ -0.75
SNRNP200-203ENST00000480242 FOXD4L5Q5VV16 416 aaPredicted RBP10.35□□□□□ -0.75
SNRNP200-203ENST00000480242 FOXD4L4Q8WXT5 416 aaPredicted RBP10.35□□□□□ -0.75
SNRNP200-203ENST00000480242 CHAMP1Q96JM3 812 aa10.35□□□□□ -0.75
SNRNP200-203ENST00000480242 EMILIN1Q9Y6C2 1016 aa10.35□□□□□ -0.75
SNRNP200-203ENST00000480242 BTAF1O14981 1849 aa10.35□□□□□ -0.75
SNRNP200-203ENST00000480242 ZNF335Q9H4Z2 1342 aaPredicted RBP10.35□□□□□ -0.75
SNRNP200-203ENST00000480242 CT47B1P0C2W7 299 aaPredicted RBP10.35□□□□□ -0.75
SNRNP200-203ENST00000480242 AMPHP49418 695 aa10.35□□□□□ -0.75
SNRNP200-203ENST00000480242 ZNF771Q7L3S4 317 aaPredicted RBP10.35□□□□□ -0.75
SNRNP200-203ENST00000480242 PHF8Q9UPP1 1060 aa10.35□□□□□ -0.75
SNRNP200-203ENST00000480242 C17orf53Q8N3J3 647 aaPredicted RBP10.34□□□□□ -0.75
SNRNP200-203ENST00000480242 NECTIN2Q92692 538 aa10.34□□□□□ -0.75
SNRNP200-203ENST00000480242 ZNF428Q96B54 188 aa10.34□□□□□ -0.75
SNRNP200-203ENST00000480242 LMBRD1Q9NUN5 540 aa10.34□□□□□ -0.75
SNRNP200-203ENST00000480242 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.34□□□□□ -0.75
SNRNP200-203ENST00000480242 DIAPH1O60610 1272 aaKnown RBP10.34□□□□□ -0.75
SNRNP200-203ENST00000480242 WDR63Q8IWG1 891 aa10.34□□□□□ -0.75
SNRNP200-203ENST00000480242 DZIP1LQ8IYY4 767 aaKnown RBP10.34□□□□□ -0.75
SNRNP200-203ENST00000480242 APBB1O00213 710 aa10.33□□□□□ -0.76
SNRNP200-203ENST00000480242 PKP1Q13835 747 aa10.33□□□□□ -0.76
SNRNP200-203ENST00000480242 KIF2CQ99661 725 aa10.33□□□□□ -0.76
SNRNP200-203ENST00000480242 NPHP3Q7Z494 1330 aa10.33□□□□□ -0.76
SNRNP200-203ENST00000480242 TOM1O60784 492 aa10.33□□□□□ -0.76
SNRNP200-203ENST00000480242 FCHSD2O94868 740 aa10.33□□□□□ -0.76
SNRNP200-203ENST00000480242 HAP1P54257 671 aaPredicted RBP10.33□□□□□ -0.76
SNRNP200-203ENST00000480242 NLRP6P59044 892 aa10.33□□□□□ -0.76
SNRNP200-203ENST00000480242 ZKSCAN2Q63HK3 967 aa10.33□□□□□ -0.76
SNRNP200-203ENST00000480242 UBR3Q6ZT12 1888 aa10.32□□□□□ -0.76
SNRNP200-203ENST00000480242 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.32□□□□□ -0.761e-8■□□□□ 8.5
SNRNP200-203ENST00000480242 KIF3AQ9Y496 699 aa10.32□□□□□ -0.76
SNRNP200-203ENST00000480242 KDM6AO15550 1401 aaPredicted RBP10.32□□□□□ -0.76
SNRNP200-203ENST00000480242 U2AF2P26368 475 aaKnown RBP eCLIP10.32□□□□□ -0.76
SNRNP200-203ENST00000480242 PRKAR2BP31323 418 aa10.32□□□□□ -0.76
SNRNP200-203ENST00000480242 DCTN1Q14203 1278 aa10.32□□□□□ -0.76
SNRNP200-203ENST00000480242 TAF7LQ5H9L4 462 aa10.32□□□□□ -0.76
SNRNP200-203ENST00000480242 PDCL2Q8N4E4 241 aa10.32□□□□□ -0.76
SNRNP200-203ENST00000480242 GPT2Q8TD30 523 aa10.32□□□□□ -0.76
SNRNP200-203ENST00000480242 IPO4Q8TEX9 1081 aaKnown RBP10.32□□□□□ -0.76
SNRNP200-203ENST00000480242 IP6K1Q92551 441 aa10.32□□□□□ -0.76
SNRNP200-203ENST00000480242 SMC4Q9NTJ3 1288 aa10.32□□□□□ -0.76
SNRNP200-203ENST00000480242 BCL9LQ86UU0 1499 aa10.31□□□□□ -0.76
SNRNP200-203ENST00000480242 ESCO1Q5FWF5 840 aa10.31□□□□□ -0.76
SNRNP200-203ENST00000480242 TMEM63CQ9P1W3 806 aa10.31□□□□□ -0.76
SNRNP200-203ENST00000480242 LTBP1Q14766 1721 aa10.31□□□□□ -0.76
SNRNP200-203ENST00000480242 KIF16BQ96L93 1317 aa10.31□□□□□ -0.76
SNRNP200-203ENST00000480242 TPRNQ4KMQ1 711 aa10.31□□□□□ -0.76
SNRNP200-203ENST00000480242 LRSAM1Q6UWE0 723 aa10.31□□□□□ -0.76
SNRNP200-203ENST00000480242 KCNH5Q8NCM2 988 aa10.31□□□□□ -0.76
SNRNP200-203ENST00000480242 COL15A1P39059 1388 aa10.31□□□□□ -0.76
SNRNP200-203ENST00000480242 HMGN5P82970 282 aaKnown RBP10.3□□□□□ -0.76
SNRNP200-203ENST00000480242 BCL2L12Q9HB09 334 aa10.3□□□□□ -0.76
SNRNP200-203ENST00000480242 MAP3K19Q56UN5 1328 aa10.3□□□□□ -0.76
SNRNP200-203ENST00000480242 NKX1-1Q15270 411 aaPredicted RBP10.3□□□□□ -0.76
SNRNP200-203ENST00000480242 RUNDC1Q96C34 613 aa10.3□□□□□ -0.76
SNRNP200-203ENST00000480242 NSFL1CQ9UNZ2 370 aaKnown RBP10.3□□□□□ -0.76
SNRNP200-203ENST00000480242 TRIM35Q9UPQ4 493 aa10.3□□□□□ -0.76
SNRNP200-203ENST00000480242 NUCB2P80303 420 aa10.3□□□□□ -0.76
SNRNP200-203ENST00000480242 PRIMPOLQ96LW4 560 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms