RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 GJA3Q9Y6H8 435 aa8.48□□□□□ -1.05
CDC42BPA-212ENST00000478573 A0A1W2PNR3 127 aa8.47□□□□□ -1.05
CDC42BPA-212ENST00000478573 DCDC2BA2VCK2 349 aa8.47□□□□□ -1.05
CDC42BPA-212ENST00000478573 POM121CA8CG34 1229 aa8.47□□□□□ -1.05
CDC42BPA-212ENST00000478573 USP17L5A8MUK1 530 aa8.47□□□□□ -1.05
CDC42BPA-212ENST00000478573 C2CD2LO14523 706 aa8.47□□□□□ -1.05
CDC42BPA-212ENST00000478573 ATXN7O15265 892 aaPredicted RBP8.47□□□□□ -1.05
CDC42BPA-212ENST00000478573 TMEM132AQ24JP5 1023 aa8.47□□□□□ -1.05
CDC42BPA-212ENST00000478573 EDARADDQ8WWZ3 215 aa8.47□□□□□ -1.05
CDC42BPA-212ENST00000478573 DCAF5Q96JK2 942 aa8.47□□□□□ -1.05
CDC42BPA-212ENST00000478573 SLC4A9Q96Q91 983 aa8.47□□□□□ -1.05
CDC42BPA-212ENST00000478573 NDFIP2Q9NV92 336 aa8.47□□□□□ -1.05
CDC42BPA-212ENST00000478573 DNAAF2Q9NVR5 837 aaKnown RBP8.47□□□□□ -1.05
CDC42BPA-212ENST00000478573 GGA1Q9UJY5 639 aa8.47□□□□□ -1.05
CDC42BPA-212ENST00000478573 PCDHGC4Q9Y5F7 938 aa8.47□□□□□ -1.05
CDC42BPA-212ENST00000478573 CDK2AP1O14519 115 aa8.46□□□□□ -1.06
CDC42BPA-212ENST00000478573 BACH1O14867 736 aa8.46□□□□□ -1.06
CDC42BPA-212ENST00000478573 KHNYNO15037 678 aaKnown RBP8.46□□□□□ -1.06
CDC42BPA-212ENST00000478573 SNRPNP63162 240 aaKnown RBP8.46□□□□□ -1.06
CDC42BPA-212ENST00000478573 FOXK2Q01167 660 aa8.46□□□□□ -1.06
CDC42BPA-212ENST00000478573 FLIIQ13045 1269 aa8.46□□□□□ -1.06
CDC42BPA-212ENST00000478573 SUZ12Q15022 739 aaKnown RBP8.46□□□□□ -1.06
CDC42BPA-212ENST00000478573 MTFR1Q15390 333 aa8.46□□□□□ -1.06
CDC42BPA-212ENST00000478573 ZNF358Q9NW07 568 aa8.46□□□□□ -1.06
CDC42BPA-212ENST00000478573 IQSEC3Q9UPP2 1182 aaPredicted RBP8.46□□□□□ -1.06
CDC42BPA-212ENST00000478573 LZTS3O60299 673 aaPredicted RBP8.45□□□□□ -1.06
CDC42BPA-212ENST00000478573 IGHA1P01876 353 aa8.45□□□□□ -1.06
CDC42BPA-212ENST00000478573 CD33P20138 364 aa8.45□□□□□ -1.06
CDC42BPA-212ENST00000478573 BICDL1Q6ZP65 573 aa8.45□□□□□ -1.06
CDC42BPA-212ENST00000478573 NLRP8Q86W28 1048 aa8.45□□□□□ -1.06
CDC42BPA-212ENST00000478573 NFATC2IPQ8NCF5 419 aa8.45□□□□□ -1.06
CDC42BPA-212ENST00000478573 ZDHHC3Q9NYG2 299 aa8.44□□□□□ -1.06
CDC42BPA-212ENST00000478573 MKL2Q9ULH7 1088 aa8.44□□□□□ -1.06
CDC42BPA-212ENST00000478573 NEURL1BA8MQ27 555 aa8.43□□□□□ -1.06
CDC42BPA-212ENST00000478573 MAPTP10636 758 aaKnown RBP8.43□□□□□ -1.06
CDC42BPA-212ENST00000478573 TXLNAP40222 546 aa8.43□□□□□ -1.06
CDC42BPA-212ENST00000478573 PLA2G4EQ3MJ16 856 aa8.43□□□□□ -1.06
CDC42BPA-212ENST00000478573 TBCELQ5QJ74 424 aa8.43□□□□□ -1.06
CDC42BPA-212ENST00000478573 SLCO4C1Q6ZQN7 724 aa8.43□□□□□ -1.06
CDC42BPA-212ENST00000478573 ZNF295-AS1Q8N0V1 137 aa8.43□□□□□ -1.06
CDC42BPA-212ENST00000478573 ADAMTS19Q8TE59 1207 aa8.43□□□□□ -1.06
CDC42BPA-212ENST00000478573 ZIC5Q96T25 663 aa8.43□□□□□ -1.06
CDC42BPA-212ENST00000478573 SCHIP1Q9P0W5 487 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-212ENST00000478573 ZNF232Q9UNY5 417 aa8.43□□□□□ -1.06
CDC42BPA-212ENST00000478573 HDGFL1Q5TGJ6 251 aa8.42□□□□□ -1.06
CDC42BPA-212ENST00000478573 TNS4Q8IZW8 715 aa8.42□□□□□ -1.06
CDC42BPA-212ENST00000478573 TPCN2Q8NHX9 752 aa8.42□□□□□ -1.06
CDC42BPA-212ENST00000478573 USP17L3A6NCW0 530 aa8.41□□□□□ -1.06
CDC42BPA-212ENST00000478573 USP17L4A6NCW7 530 aa8.41□□□□□ -1.06
CDC42BPA-212ENST00000478573 MSTNO14793 375 aa8.41□□□□□ -1.06
CDC42BPA-212ENST00000478573 ARAFP10398 606 aa8.41□□□□□ -1.06
CDC42BPA-212ENST00000478573 TNP2Q05952 138 aa8.41□□□□□ -1.06
CDC42BPA-212ENST00000478573 USP17L2Q6R6M4 530 aa8.41□□□□□ -1.06
CDC42BPA-212ENST00000478573 USP17L1Q7RTZ2 530 aa8.41□□□□□ -1.06
CDC42BPA-212ENST00000478573 TRIM50Q86XT4 487 aa8.41□□□□□ -1.06
CDC42BPA-212ENST00000478573 SLC9A9Q8IVB4 645 aa8.41□□□□□ -1.06
CDC42BPA-212ENST00000478573 ZDHHC1Q8WTX9 485 aa8.41□□□□□ -1.06
CDC42BPA-212ENST00000478573 EPXP11678 715 aa8.4□□□□□ -1.06
CDC42BPA-212ENST00000478573 GRIN2CQ14957 1233 aa8.4□□□□□ -1.06
CDC42BPA-212ENST00000478573 L3MBTL2Q969R5 705 aa8.4□□□□□ -1.06
CDC42BPA-212ENST00000478573 PRR12Q9ULL5 1215 aa8.4□□□□□ -1.06
CDC42BPA-212ENST00000478573 NOS2P35228 1153 aa8.39□□□□□ -1.07
CDC42BPA-212ENST00000478573 UCN2Q96RP3 112 aa8.39□□□□□ -1.07
CDC42BPA-212ENST00000478573 NEUROD4Q9HD90 331 aa8.39□□□□□ -1.07
CDC42BPA-212ENST00000478573 KIAA1024Q9UPX6 916 aa8.39□□□□□ -1.07
CDC42BPA-212ENST00000478573 ATP9BO43861 1147 aa8.38□□□□□ -1.07
CDC42BPA-212ENST00000478573 FAM157BP0CG42 384 aa8.38□□□□□ -1.07
CDC42BPA-212ENST00000478573 ADH6P28332 368 aa8.38□□□□□ -1.07
CDC42BPA-212ENST00000478573 ATP1A2P50993 1020 aa8.38□□□□□ -1.07
CDC42BPA-212ENST00000478573 CCDC102BQ68D86 513 aa8.38□□□□□ -1.07
CDC42BPA-212ENST00000478573 LRRC69Q6ZNQ3 347 aa8.38□□□□□ -1.07
CDC42BPA-212ENST00000478573 BTBD6Q96KE9 485 aa8.38□□□□□ -1.07
CDC42BPA-212ENST00000478573 SPOCK3Q9BQ16 436 aa8.38□□□□□ -1.07
CDC42BPA-212ENST00000478573 HCN2Q9UL51 889 aa8.38□□□□□ -1.07
CDC42BPA-212ENST00000478573 EPHA4P54764 986 aa8.37□□□□□ -1.07
CDC42BPA-212ENST00000478573 PCBP4P57723 403 aaKnown RBP8.37□□□□□ -1.07
CDC42BPA-212ENST00000478573 CLDN10P78369 228 aa8.37□□□□□ -1.07
CDC42BPA-212ENST00000478573 TEAD4Q15561 434 aa8.37□□□□□ -1.07
CDC42BPA-212ENST00000478573 CLUAP1Q96AJ1 413 aa8.37□□□□□ -1.07
CDC42BPA-212ENST00000478573 ZNF594Q96JF6 807 aaPredicted RBP8.37□□□□□ -1.07
CDC42BPA-212ENST00000478573 STRN4Q9NRL3 753 aa8.37□□□□□ -1.07
CDC42BPA-212ENST00000478573 MARK1Q9P0L2 795 aa8.37□□□□□ -1.07
CDC42BPA-212ENST00000478573 MKRN1Q9UHC7 482 aaKnown RBP8.37□□□□□ -1.07
CDC42BPA-212ENST00000478573 RBM19Q9Y4C8 960 aaKnown RBP8.37□□□□□ -1.07
CDC42BPA-212ENST00000478573 SERTM1A2A2V5 107 aa8.36□□□□□ -1.07
CDC42BPA-212ENST00000478573 ITGB2P05107 769 aa8.36□□□□□ -1.07
CDC42BPA-212ENST00000478573 COL8A1P27658 744 aa8.36□□□□□ -1.07
CDC42BPA-212ENST00000478573 FAM182BQ5T319 152 aa8.36□□□□□ -1.07
CDC42BPA-212ENST00000478573 SH3PXD2AQ5TCZ1 1133 aa8.36□□□□□ -1.07
CDC42BPA-212ENST00000478573 FCHSD1Q86WN1 690 aa8.36□□□□□ -1.07
CDC42BPA-212ENST00000478573 PLEKHM2Q8IWE5 1019 aa8.36□□□□□ -1.07
CDC42BPA-212ENST00000478573 OGFOD1Q8N543 542 aa8.36□□□□□ -1.07
CDC42BPA-212ENST00000478573 SUV39H2Q9H5I1 410 aa8.36□□□□□ -1.07
CDC42BPA-212ENST00000478573 CHMP3Q9Y3E7 222 aa8.36□□□□□ -1.07
CDC42BPA-212ENST00000478573 GTF3C3Q9Y5Q9 886 aa8.36□□□□□ -1.07
CDC42BPA-212ENST00000478573 PIK3R2O00459 728 aa8.35□□□□□ -1.07
CDC42BPA-212ENST00000478573 GNB5O14775 395 aa8.35□□□□□ -1.07
CDC42BPA-212ENST00000478573 ZBTB7BO15156 539 aaPredicted RBP8.35□□□□□ -1.07
CDC42BPA-212ENST00000478573 SAMD5Q5TGI4 173 aa8.35□□□□□ -1.07
CDC42BPA-212ENST00000478573 LINC00114Q6XXX2 140 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms