RNA–Protein interactions for RNA: ENST00000478215.1

COL1A2-207, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 3

Gene COL1A2, Length 863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-207ENST00000478215 N4BP2Q86UW6 1770 aaPredicted RBP17.17■□□□□ 0.34
COL1A2-207ENST00000478215 KIAA1551Q9HCM1 1747 aa17.16■□□□□ 0.34
COL1A2-207ENST00000478215 NEUROD2Q15784 382 aa17.16■□□□□ 0.34
COL1A2-207ENST00000478215 ARHGEF1Q92888 912 aaKnown RBP17.16■□□□□ 0.34
COL1A2-207ENST00000478215 FMNL2Q96PY5 1086 aa17.16■□□□□ 0.34
COL1A2-207ENST00000478215 ARXQ96QS3 562 aa17.16■□□□□ 0.34
COL1A2-207ENST00000478215 ZBTB1Q9Y2K1 713 aa17.16■□□□□ 0.34
COL1A2-207ENST00000478215 TRAPPC3LQ5T215 181 aa17.15■□□□□ 0.34
COL1A2-207ENST00000478215 BRCA1P38398 1863 aaKnown RBP17.15■□□□□ 0.34
COL1A2-207ENST00000478215 SOS1Q07889 1333 aaPredicted RBP17.15■□□□□ 0.34
COL1A2-207ENST00000478215 PRAMEF22A3QJZ6 481 aa17.14■□□□□ 0.33
COL1A2-207ENST00000478215 ADRA2BP18089 450 aa17.14■□□□□ 0.33
COL1A2-207ENST00000478215 POLD1P28340 1107 aa17.14■□□□□ 0.33
COL1A2-207ENST00000478215 FHDC1Q9C0D6 1143 aaPredicted RBP17.14■□□□□ 0.33
COL1A2-207ENST00000478215 MRS2Q9HD23 443 aa17.14■□□□□ 0.33
COL1A2-207ENST00000478215 TRIM35Q9UPQ4 493 aa17.14■□□□□ 0.33
COL1A2-207ENST00000478215 UTRNP46939 3433 aa17.12■□□□□ 0.33
COL1A2-207ENST00000478215 RFC4P35249 363 aa17.12■□□□□ 0.33
COL1A2-207ENST00000478215 PNISRQ8TF01 805 aaKnown RBP17.12■□□□□ 0.33
COL1A2-207ENST00000478215 SRP68Q9UHB9 627 aaKnown RBP17.12■□□□□ 0.33
COL1A2-207ENST00000478215 COL15A1P39059 1388 aa17.12■□□□□ 0.33
COL1A2-207ENST00000478215 NRXN2Q9P2S2 1712 aa17.11■□□□□ 0.33
COL1A2-207ENST00000478215 APAF1O14727 1248 aa17.11■□□□□ 0.33
COL1A2-207ENST00000478215 STARD3NLO95772 234 aa17.11■□□□□ 0.33
COL1A2-207ENST00000478215 LMOD3Q0VAK6 560 aa17.11■□□□□ 0.33
COL1A2-207ENST00000478215 USP16Q9Y5T5 823 aa17.11■□□□□ 0.33
COL1A2-207ENST00000478215 USP42Q9H9J4 1324 aaKnown RBP17.11■□□□□ 0.33
COL1A2-207ENST00000478215 A1BGP04217 495 aa17.1■□□□□ 0.33
COL1A2-207ENST00000478215 GYS1P13807 737 aa17.1■□□□□ 0.33
COL1A2-207ENST00000478215 CANXP27824 592 aaKnown RBP17.1■□□□□ 0.33
COL1A2-207ENST00000478215 SYT17Q9BSW7 474 aa17.1■□□□□ 0.33
COL1A2-207ENST00000478215 TEX13AQ9BXU3 409 aaPredicted RBP17.1■□□□□ 0.33
COL1A2-207ENST00000478215 ANKRD31Q8N7Z5 1873 aa17.1■□□□□ 0.33
COL1A2-207ENST00000478215 SENP3-EIF4A1A0A087X0R7 540 aa17.09■□□□□ 0.33
COL1A2-207ENST00000478215 EIF4A1P60842 406 aaKnown RBP17.09■□□□□ 0.33
COL1A2-207ENST00000478215 KLHL34Q8N239 644 aa17.09■□□□□ 0.33
COL1A2-207ENST00000478215 CACNA1SQ13698 1873 aa17.09■□□□□ 0.33
COL1A2-207ENST00000478215 CACNA1FO60840 1977 aa17.08■□□□□ 0.33
COL1A2-207ENST00000478215 MMP10P09238 476 aa17.08■□□□□ 0.32
COL1A2-207ENST00000478215 SNRPA1P09661 255 aaKnown RBP17.08■□□□□ 0.32
COL1A2-207ENST00000478215 PIP4K2AP48426 406 aaPredicted RBP17.08■□□□□ 0.32
COL1A2-207ENST00000478215 EIF5P55010 431 aaKnown RBP17.08■□□□□ 0.32
COL1A2-207ENST00000478215 TSPYL4Q9UJ04 414 aa17.08■□□□□ 0.32
COL1A2-207ENST00000478215 ANKRD36CQ5JPF3 1778 aa17.07■□□□□ 0.32
COL1A2-207ENST00000478215 FKBP8Q14318 412 aa17.07■□□□□ 0.32
COL1A2-207ENST00000478215 GIGYF1O75420 1035 aaPredicted RBP17.06■□□□□ 0.32
COL1A2-207ENST00000478215 USPL1Q5W0Q7 1092 aa17.06■□□□□ 0.32
COL1A2-207ENST00000478215 NLGN1Q8N2Q7 840 aa17.06■□□□□ 0.32
COL1A2-207ENST00000478215 NLGN2Q8NFZ4 835 aa17.06■□□□□ 0.32
COL1A2-207ENST00000478215 DLEC1Q9Y238 1755 aa17.06■□□□□ 0.32
COL1A2-207ENST00000478215 BCL2L12Q9HB09 334 aa17.05■□□□□ 0.32
COL1A2-207ENST00000478215 NARFQ9UHQ1 456 aa17.05■□□□□ 0.32
COL1A2-207ENST00000478215 ZNF330Q9Y3S2 320 aaPredicted RBP17.05■□□□□ 0.32
COL1A2-207ENST00000478215 ARFGEF1Q9Y6D6 1849 aa17.05■□□□□ 0.32
COL1A2-207ENST00000478215 NBPF26B4DH59 902 aa17.04■□□□□ 0.32
COL1A2-207ENST00000478215 ZPR1O75312 459 aa17.04■□□□□ 0.32
COL1A2-207ENST00000478215 IL6STP40189 918 aaPredicted RBP17.04■□□□□ 0.32
COL1A2-207ENST00000478215 NBPF10Q6P3W6 841 aaKnown RBP17.04■□□□□ 0.32
COL1A2-207ENST00000478215 NBPF15Q8N660 670 aa17.04■□□□□ 0.32
COL1A2-207ENST00000478215 LAS1LQ9Y4W2 734 aaKnown RBP17.04■□□□□ 0.32
COL1A2-207ENST00000478215 CHL1O00533 1208 aa17.03■□□□□ 0.32
COL1A2-207ENST00000478215 DDR1Q08345 913 aa17.03■□□□□ 0.32
COL1A2-207ENST00000478215 BABAM1Q9NWV8 329 aa17.03■□□□□ 0.32
COL1A2-207ENST00000478215 CCDC88AQ3V6T2 1871 aa17.02■□□□□ 0.32
COL1A2-207ENST00000478215 KRT24Q2M2I5 525 aa17.02■□□□□ 0.32
COL1A2-207ENST00000478215 TBC1D2BQ9UPU7 963 aa17.02■□□□□ 0.32
COL1A2-207ENST00000478215 C10orf71Q711Q0 1435 aa17.02■□□□□ 0.31
COL1A2-207ENST00000478215 COL11A2P13942 1736 aaPredicted RBP17.01■□□□□ 0.31
COL1A2-207ENST00000478215 FAM9BQ8IZU0 186 aa17.01■□□□□ 0.31
COL1A2-207ENST00000478215 CD2APQ9Y5K6 639 aa17.01■□□□□ 0.31
COL1A2-207ENST00000478215 A0A087WZG4 1122 aa17■□□□□ 0.31
COL1A2-207ENST00000478215 ZNF853P0CG23 659 aa17■□□□□ 0.31
COL1A2-207ENST00000478215 TM4SF1P30408 202 aa17■□□□□ 0.31
COL1A2-207ENST00000478215 NFIXQ14938 502 aa17■□□□□ 0.31
COL1A2-207ENST00000478215 PARP3Q9Y6F1 533 aa17■□□□□ 0.31
COL1A2-207ENST00000478215 ARFGEF2Q9Y6D5 1785 aa17■□□□□ 0.31
COL1A2-207ENST00000478215 POLRMTO00411 1230 aaKnown RBP16.99■□□□□ 0.31
COL1A2-207ENST00000478215 CAMTA2O94983 1202 aa16.99■□□□□ 0.31
COL1A2-207ENST00000478215 DZIP3Q86Y13 1208 aaKnown RBP16.99■□□□□ 0.31
COL1A2-207ENST00000478215 CFAP44Q96MT7 982 aa16.99■□□□□ 0.31
COL1A2-207ENST00000478215 MBIPQ9NS73 344 aa16.99■□□□□ 0.31
COL1A2-207ENST00000478215 PXDNLA1KZ92 1463 aa16.99■□□□□ 0.31
COL1A2-207ENST00000478215 EIF2S2P20042 333 aaKnown RBP16.97■□□□□ 0.31
COL1A2-207ENST00000478215 TBC1D9BQ66K14 1250 aa16.97■□□□□ 0.31
COL1A2-207ENST00000478215 IFT57Q9NWB7 429 aa16.97■□□□□ 0.31
COL1A2-207ENST00000478215 SBF1O95248 1867 aa16.97■□□□□ 0.31
COL1A2-207ENST00000478215 CCDC27Q2M243 656 aa16.96■□□□□ 0.31
COL1A2-207ENST00000478215 PROSER3Q2NL68 480 aa16.96■□□□□ 0.31
COL1A2-207ENST00000478215 BICDL1Q6ZP65 573 aa16.96■□□□□ 0.31
COL1A2-207ENST00000478215 NPM2Q86SE8 214 aaKnown RBP16.96■□□□□ 0.31
COL1A2-207ENST00000478215 WWC1Q8IX03 1113 aa16.96■□□□□ 0.31
COL1A2-207ENST00000478215 NGEFQ8N5V2 710 aa16.96■□□□□ 0.31
COL1A2-207ENST00000478215 NECTIN2Q92692 538 aa16.96■□□□□ 0.31
COL1A2-207ENST00000478215 SALL2Q9Y467 1007 aaPredicted RBP16.96■□□□□ 0.31
COL1A2-207ENST00000478215 LAMB2P55268 1798 aa16.96■□□□□ 0.31
COL1A2-207ENST00000478215 ANXA1P04083 346 aa16.95■□□□□ 0.3
COL1A2-207ENST00000478215 MYL6BP14649 208 aa16.95■□□□□ 0.3
COL1A2-207ENST00000478215 GNAI1P63096 354 aa16.95■□□□□ 0.3
COL1A2-207ENST00000478215 CALD1Q05682 793 aaKnown RBP16.95■□□□□ 0.3
COL1A2-207ENST00000478215 CARMIL3Q8ND23 1372 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms