RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	RBM19	Q9Y4C8	960 aa	Known RBP	8.07	□□□□□ -1.12
RBM39-231	ENST00000477334	CARNS1	A5YM72	827 aa		8.06	□□□□□ -1.12
RBM39-231	ENST00000477334	SFI1	A8K8P3	1242 aa		8.06	□□□□□ -1.12
RBM39-231	ENST00000477334	TMEM229A	B2RXF0	380 aa		8.06	□□□□□ -1.12
RBM39-231	ENST00000477334	DKK1	O94907	266 aa		8.06	□□□□□ -1.12
RBM39-231	ENST00000477334	ARHGEF15	O94989	841 aa		8.06	□□□□□ -1.12
RBM39-231	ENST00000477334	CSB-PGBD3	P0DP91	1061 aa		8.06	□□□□□ -1.12
RBM39-231	ENST00000477334	GTF2E1	P29083	439 aa	Predicted RBP	8.06	□□□□□ -1.12
RBM39-231	ENST00000477334	GDF10	P55107	478 aa		8.06	□□□□□ -1.12
RBM39-231	ENST00000477334	SUZ12	Q15022	739 aa	Known RBP	8.06	□□□□□ -1.12
RBM39-231	ENST00000477334	FAM200A	Q8TCP9	573 aa		8.06	□□□□□ -1.12
RBM39-231	ENST00000477334	GTPBP3	Q969Y2	492 aa	Known RBP	8.06	□□□□□ -1.12
RBM39-231	ENST00000477334	ARX	Q96QS3	562 aa		8.06	□□□□□ -1.12
RBM39-231	ENST00000477334		A0A1B0GTH6	734 aa		8.05	□□□□□ -1.12
RBM39-231	ENST00000477334	SEC13	P55735	322 aa		8.05	□□□□□ -1.12
RBM39-231	ENST00000477334	ELOA	Q14241	798 aa	Known RBP	8.05	□□□□□ -1.12
RBM39-231	ENST00000477334	GNAS	Q5JWF2	1037 aa		8.05	□□□□□ -1.12
RBM39-231	ENST00000477334	TMEM164	Q5U3C3	297 aa		8.05	□□□□□ -1.12
RBM39-231	ENST00000477334	TMEM214	Q6NUQ4	689 aa	Known RBP	8.05	□□□□□ -1.12
RBM39-231	ENST00000477334	TRERF1	Q96PN7	1200 aa		8.05	□□□□□ -1.12
RBM39-231	ENST00000477334	NUCKS1	Q9H1E3	243 aa	Known RBP	8.05	□□□□□ -1.12
RBM39-231	ENST00000477334	SERTAD1	Q9UHV2	236 aa		8.05	□□□□□ -1.12
RBM39-231	ENST00000477334	RNF225	M0QZC1	329 aa	Predicted RBP	8.04	□□□□□ -1.12
RBM39-231	ENST00000477334	INHA	P05111	366 aa		8.04	□□□□□ -1.12
RBM39-231	ENST00000477334	PHKA2	P46019	1235 aa		8.04	□□□□□ -1.12
RBM39-231	ENST00000477334	GSK3A	P49840	483 aa		8.04	□□□□□ -1.12
RBM39-231	ENST00000477334	C4orf17	Q53FE4	359 aa		8.04	□□□□□ -1.12
RBM39-231	ENST00000477334	LYPD4	Q6UWN0	246 aa		8.04	□□□□□ -1.12
RBM39-231	ENST00000477334	HOMEZ	Q8IX15	550 aa		8.04	□□□□□ -1.12
RBM39-231	ENST00000477334	ZNF358	Q9NW07	568 aa		8.04	□□□□□ -1.12
RBM39-231	ENST00000477334	LGR5	O75473	907 aa		8.03	□□□□□ -1.12
RBM39-231	ENST00000477334	TLR1	Q15399	786 aa		8.03	□□□□□ -1.12
RBM39-231	ENST00000477334	GPAM	Q9HCL2	828 aa		8.03	□□□□□ -1.12
RBM39-231	ENST00000477334	IGF1R	P08069	1367 aa		8.02	□□□□□ -1.13
RBM39-231	ENST00000477334	CELA2B	P08218	269 aa	Predicted RBP	8.02	□□□□□ -1.13
RBM39-231	ENST00000477334	MAP3K10	Q02779	954 aa		8.02	□□□□□ -1.13
RBM39-231	ENST00000477334	PPARGC1B	Q86YN6	1023 aa	Known RBP	8.02	□□□□□ -1.13
RBM39-231	ENST00000477334	TSEN2	Q8NCE0	465 aa	Known RBP	8.02	□□□□□ -1.13
RBM39-231	ENST00000477334	RHBDD1	Q8TEB9	315 aa		8.02	□□□□□ -1.13
RBM39-231	ENST00000477334	TMEM88B	A6NKF7	163 aa		8.01	□□□□□ -1.13
RBM39-231	ENST00000477334	BACH1	O14867	736 aa		8.01	□□□□□ -1.13
RBM39-231	ENST00000477334	THBS1	P07996	1170 aa		8.01	□□□□□ -1.13
RBM39-231	ENST00000477334	LBR	Q14739	615 aa	Known RBP	8.01	□□□□□ -1.13
RBM39-231	ENST00000477334	HINFP	Q9BQA5	517 aa		8.01	□□□□□ -1.13
RBM39-231	ENST00000477334	MX2	P20592	715 aa		8	□□□□□ -1.13
RBM39-231	ENST00000477334	FAM69C	Q0P6D2	419 aa		8	□□□□□ -1.13
RBM39-231	ENST00000477334	TNS4	Q8IZW8	715 aa		8	□□□□□ -1.13
RBM39-231	ENST00000477334	MSX1	P28360	303 aa		7.99	□□□□□ -1.13
RBM39-231	ENST00000477334	SMTN	P53814	917 aa		7.99	□□□□□ -1.13
RBM39-231	ENST00000477334	MARS	P56192	900 aa	Known RBP	7.99	□□□□□ -1.13
RBM39-231	ENST00000477334	RASSF7	Q02833	373 aa		7.99	□□□□□ -1.13
RBM39-231	ENST00000477334	PGBD3	Q8N328	593 aa		7.99	□□□□□ -1.13
RBM39-231	ENST00000477334	CFHR5	Q9BXR6	569 aa		7.99	□□□□□ -1.13
RBM39-231	ENST00000477334	ENAM	Q9NRM1	1142 aa		7.99	□□□□□ -1.13
RBM39-231	ENST00000477334	NSFL1C	Q9UNZ2	370 aa	Known RBP	7.99	□□□□□ -1.13
RBM39-231	ENST00000477334	UST	Q9Y2C2	406 aa		7.99	□□□□□ -1.13
RBM39-231	ENST00000477334		M0R2N6	131 aa		7.98	□□□□□ -1.13
RBM39-231	ENST00000477334	SLC4A9	Q96Q91	983 aa		7.98	□□□□□ -1.13
RBM39-231	ENST00000477334	RUBCNL	Q9H714	662 aa		7.98	□□□□□ -1.13
RBM39-231	ENST00000477334		A6NJY4	79 aa		7.97	□□□□□ -1.13
RBM39-231	ENST00000477334	GDF11	O95390	407 aa		7.97	□□□□□ -1.13
RBM39-231	ENST00000477334	BCR	P11274	1271 aa		7.97	□□□□□ -1.13
RBM39-231	ENST00000477334	PLA2G4A	P47712	749 aa		7.97	□□□□□ -1.13
RBM39-231	ENST00000477334	UBAP2L	Q14157	1087 aa	Known RBP	7.97	□□□□□ -1.13
RBM39-231	ENST00000477334	SWI5	Q1ZZU3	235 aa		7.97	□□□□□ -1.13
RBM39-231	ENST00000477334	TMEM151A	Q8N4L1	468 aa		7.97	□□□□□ -1.13
RBM39-231	ENST00000477334	GAS2L2	Q8NHY3	880 aa		7.97	□□□□□ -1.13
RBM39-231	ENST00000477334	ACD	Q96AP0	544 aa		7.97	□□□□□ -1.13
RBM39-231	ENST00000477334	SCARF2	Q96GP6	870 aa	Predicted RBP	7.97	□□□□□ -1.13
RBM39-231	ENST00000477334	PHF24	Q9UPV7	400 aa		7.97	□□□□□ -1.13
RBM39-231	ENST00000477334	PRMT3	O60678	531 aa		7.96	□□□□□ -1.14
RBM39-231	ENST00000477334	EPHA4	P54764	986 aa		7.96	□□□□□ -1.14
RBM39-231	ENST00000477334	EFHC2	Q5JST6	749 aa		7.96	□□□□□ -1.14
RBM39-231	ENST00000477334	TBCEL	Q5QJ74	424 aa		7.96	□□□□□ -1.14
RBM39-231	ENST00000477334	PRIMPOL	Q96LW4	560 aa		7.96	□□□□□ -1.14
RBM39-231	ENST00000477334	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	7.96	□□□□□ -1.14
RBM39-231	ENST00000477334	CRISPLD1	Q9H336	500 aa		7.96	□□□□□ -1.14
RBM39-231	ENST00000477334	LRRC4B	Q9NT99	713 aa		7.96	□□□□□ -1.14
RBM39-231	ENST00000477334	SCHIP1	Q9P0W5	487 aa	Predicted RBP	7.96	□□□□□ -1.14
RBM39-231	ENST00000477334	SLAIN2	Q9P270	581 aa		7.96	□□□□□ -1.14
RBM39-231	ENST00000477334	USP3	Q9Y6I4	520 aa		7.96	□□□□□ -1.14
RBM39-231	ENST00000477334	PDIA4	P13667	645 aa	Known RBP	7.95	□□□□□ -1.14
RBM39-231	ENST00000477334	IRS1	P35568	1242 aa		7.95	□□□□□ -1.14
RBM39-231	ENST00000477334	MAP2K3	P46734	347 aa		7.95	□□□□□ -1.14
RBM39-231	ENST00000477334	PDE4C	Q08493	712 aa		7.95	□□□□□ -1.14
RBM39-231	ENST00000477334	MTFR1	Q15390	333 aa		7.95	□□□□□ -1.14
RBM39-231	ENST00000477334	NIFK	Q9BYG3	293 aa	Known RBP	7.95	□□□□□ -1.14
RBM39-231	ENST00000477334	ATP4A	P20648	1035 aa		7.94	□□□□□ -1.14
RBM39-231	ENST00000477334	KANK3	Q6NY19	840 aa		7.94	□□□□□ -1.14
RBM39-231	ENST00000477334	SLC9A9	Q8IVB4	645 aa		7.94	□□□□□ -1.14
RBM39-231	ENST00000477334	KCTD17	Q8N5Z5	321 aa		7.94	□□□□□ -1.14
RBM39-231	ENST00000477334	C1orf216	Q8TAB5	229 aa		7.94	□□□□□ -1.14
RBM39-231	ENST00000477334	SCG3	Q8WXD2	468 aa	Known RBP	7.94	□□□□□ -1.14
RBM39-231	ENST00000477334	CLP1	Q92989	425 aa	Known RBP	7.94	□□□□□ -1.14
RBM39-231	ENST00000477334	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	7.94	□□□□□ -1.14
RBM39-231	ENST00000477334	CDK2AP1	O14519	115 aa		7.93	□□□□□ -1.14
RBM39-231	ENST00000477334	FOXK2	Q01167	660 aa		7.93	□□□□□ -1.14
RBM39-231	ENST00000477334	ZNF295-AS1	Q8N0V1	137 aa		7.93	□□□□□ -1.14
RBM39-231	ENST00000477334	CHMP7	Q8WUX9	453 aa	Predicted RBP	7.93	□□□□□ -1.14
RBM39-231	ENST00000477334	OXCT2	Q9BYC2	517 aa	Predicted RBP	7.93	□□□□□ -1.14

Retrieved 100 of 20,778 RNA–protein pairs in 169 ms