RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 USP16Q9Y5T5 823 aa16.54■□□□□ 0.24
HDAC7-221ENST00000477203 DBF4Q9UBU7 674 aaPredicted RBP16.54■□□□□ 0.24
HDAC7-221ENST00000477203 TTC5Q8N0Z6 440 aa16.53■□□□□ 0.24
HDAC7-221ENST00000477203 TNS3Q68CZ2 1445 aa16.53■□□□□ 0.24
HDAC7-221ENST00000477203 CABP4P57796 275 aa16.52■□□□□ 0.24
HDAC7-221ENST00000477203 IFNL2Q8IZJ0 200 aa16.52■□□□□ 0.24
HDAC7-221ENST00000477203 PA2G4Q9UQ80 394 aaKnown RBP16.52■□□□□ 0.24
HDAC7-221ENST00000477203 SLIT3O75094 1523 aa16.52■□□□□ 0.24
HDAC7-221ENST00000477203 CDC45O75419 566 aa16.52■□□□□ 0.24
HDAC7-221ENST00000477203 LARP1Q6PKG0 1096 aaKnown RBP16.52■□□□□ 0.24
HDAC7-221ENST00000477203 RIC3Q7Z5B4 369 aa16.52■□□□□ 0.24
HDAC7-221ENST00000477203 ATP8B2P98198 1209 aa16.52■□□□□ 0.23
HDAC7-221ENST00000477203 NAP1L5Q96NT1 182 aaPredicted RBP16.52■□□□□ 0.23
HDAC7-221ENST00000477203 LRRCC1Q9C099 1032 aa16.52■□□□□ 0.23
HDAC7-221ENST00000477203 SLC52A2Q9HAB3 445 aa16.52■□□□□ 0.23
HDAC7-221ENST00000477203 BEND3Q5T5X7 828 aa16.51■□□□□ 0.23
HDAC7-221ENST00000477203 CD2BP2O95400 341 aaKnown RBP16.5■□□□□ 0.23
HDAC7-221ENST00000477203 SIL1Q9H173 461 aa16.5■□□□□ 0.23
HDAC7-221ENST00000477203 ATP5J2-PTCD1G3V325 749 aa16.5■□□□□ 0.23
HDAC7-221ENST00000477203 PDE1AP54750 535 aa16.5■□□□□ 0.23
HDAC7-221ENST00000477203 COPS6Q7L5N1 327 aa16.5■□□□□ 0.23
HDAC7-221ENST00000477203 XAGE3Q8WTP9 111 aa16.5■□□□□ 0.23
HDAC7-221ENST00000477203 ADCY9O60503 1353 aa16.5■□□□□ 0.23
HDAC7-221ENST00000477203 LRRC37A3O60309 1634 aa16.5■□□□□ 0.23
HDAC7-221ENST00000477203 KLHDC4Q8TBB5 520 aa16.5■□□□□ 0.23
HDAC7-221ENST00000477203 FAM208AQ9UK61 1670 aaKnown RBP16.49■□□□□ 0.23
HDAC7-221ENST00000477203 HSP90AA1P07900 732 aaKnown RBP16.49■□□□□ 0.23
HDAC7-221ENST00000477203 CCDC9Q9Y3X0 531 aaKnown RBP16.49■□□□□ 0.23
HDAC7-221ENST00000477203 USP54Q70EL1 1684 aa16.49■□□□□ 0.23
HDAC7-221ENST00000477203 HSCBQ8IWL3 235 aa16.49■□□□□ 0.23
HDAC7-221ENST00000477203 BABAM1Q9NWV8 329 aa16.49■□□□□ 0.23
HDAC7-221ENST00000477203 KDM6AO15550 1401 aaPredicted RBP16.49■□□□□ 0.23
HDAC7-221ENST00000477203 SOS1Q07889 1333 aaPredicted RBP16.49■□□□□ 0.23
HDAC7-221ENST00000477203 LMTK3Q96Q04 1460 aa16.48■□□□□ 0.23
HDAC7-221ENST00000477203 UNC5CLQ8IV45 518 aa16.48■□□□□ 0.23
HDAC7-221ENST00000477203 MYD88Q99836 296 aa16.48■□□□□ 0.23
HDAC7-221ENST00000477203 KIF1AQ12756 1690 aa16.47■□□□□ 0.23
HDAC7-221ENST00000477203 A0A0U1RQG5 324 aaPredicted RBP16.47■□□□□ 0.23
HDAC7-221ENST00000477203 ALS2Q96Q42 1657 aa16.47■□□□□ 0.23
HDAC7-221ENST00000477203 HSP90AB1P08238 724 aaKnown RBP16.47■□□□□ 0.23
HDAC7-221ENST00000477203 MX1P20591 662 aa16.47■□□□□ 0.23
HDAC7-221ENST00000477203 NOL8Q76FK4 1167 aaKnown RBP16.47■□□□□ 0.23
HDAC7-221ENST00000477203 FAM43AQ8N2R8 423 aa16.47■□□□□ 0.23
HDAC7-221ENST00000477203 KSR2Q6VAB6 950 aa16.46■□□□□ 0.23
HDAC7-221ENST00000477203 ZCRB1Q8TBF4 217 aaKnown RBP16.46■□□□□ 0.23
HDAC7-221ENST00000477203 SYTL4Q96C24 671 aaPredicted RBP16.45■□□□□ 0.22
HDAC7-221ENST00000477203 BTG4Q9NY30 223 aa16.45■□□□□ 0.22
HDAC7-221ENST00000477203 ADAMTS2O95450 1211 aa16.45■□□□□ 0.22
HDAC7-221ENST00000477203 HSP90AA2PQ14568 343 aaPredicted RBP16.45■□□□□ 0.22
HDAC7-221ENST00000477203 PDIA6Q15084 440 aa16.44■□□□□ 0.22
HDAC7-221ENST00000477203 DCAF5Q96JK2 942 aa16.44■□□□□ 0.22
HDAC7-221ENST00000477203 DDX21Q9NR30 783 aaKnown RBP eCLIP16.44■□□□□ 0.22
HDAC7-221ENST00000477203 STRCQ7RTU9 1775 aa16.44■□□□□ 0.22
HDAC7-221ENST00000477203 A1BGP04217 495 aa16.43■□□□□ 0.22
HDAC7-221ENST00000477203 SUCLG2Q96I99 432 aa16.43■□□□□ 0.22
HDAC7-221ENST00000477203 KIF2CQ99661 725 aa16.43■□□□□ 0.22
HDAC7-221ENST00000477203 RRAGDQ9NQL2 400 aaPredicted RBP16.43■□□□□ 0.22
HDAC7-221ENST00000477203 XIRP1Q702N8 1843 aaKnown RBP16.43■□□□□ 0.22
HDAC7-221ENST00000477203 RHPN1Q8TCX5 695 aa16.43■□□□□ 0.22
HDAC7-221ENST00000477203 HYPKQ9NX55 129 aa16.43■□□□□ 0.22
HDAC7-221ENST00000477203 CHMP3Q9Y3E7 222 aa16.43■□□□□ 0.22
HDAC7-221ENST00000477203 CACNA1FO60840 1977 aa16.43■□□□□ 0.22
HDAC7-221ENST00000477203 HOXB7P09629 217 aa16.43■□□□□ 0.22
HDAC7-221ENST00000477203 BICC1Q9H694 974 aaKnown RBP16.43■□□□□ 0.22
HDAC7-221ENST00000477203 LMO7Q8WWI1 1683 aa16.42■□□□□ 0.22
HDAC7-221ENST00000477203 CAMTA1Q9Y6Y1 1673 aa16.42■□□□□ 0.22
HDAC7-221ENST00000477203 WDR17Q8IZU2 1322 aa16.42■□□□□ 0.22
HDAC7-221ENST00000477203 NUTM2BA6NNL0 878 aaPredicted RBP16.42■□□□□ 0.22
HDAC7-221ENST00000477203 NUTM2EB1AL46 878 aaPredicted RBP16.42■□□□□ 0.22
HDAC7-221ENST00000477203 DDX58O95786 925 aaKnown RBP16.42■□□□□ 0.22
HDAC7-221ENST00000477203 CASC1Q6TDU7 716 aa16.42■□□□□ 0.22
HDAC7-221ENST00000477203 NUTM2AQ8IVF1 878 aaPredicted RBP16.42■□□□□ 0.22
HDAC7-221ENST00000477203 SSH3Q8TE77 659 aa16.42■□□□□ 0.22
HDAC7-221ENST00000477203 FMNL2Q96PY5 1086 aa16.42■□□□□ 0.22
HDAC7-221ENST00000477203 ANO2Q9NQ90 1003 aa16.42■□□□□ 0.22
HDAC7-221ENST00000477203 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.42■□□□□ 0.22
HDAC7-221ENST00000477203 IGKV5-2P06315 115 aa16.41■□□□□ 0.22
HDAC7-221ENST00000477203 SNRPA1P09661 255 aaKnown RBP16.41■□□□□ 0.22
HDAC7-221ENST00000477203 PIP4K2BP78356 416 aa16.41■□□□□ 0.22
HDAC7-221ENST00000477203 ZBTB3Q9H5J0 574 aa16.41■□□□□ 0.22
HDAC7-221ENST00000477203 IBTKQ9P2D0 1353 aaPredicted RBP16.41■□□□□ 0.22
HDAC7-221ENST00000477203 RBM25P49756 843 aaKnown RBP16.41■□□□□ 0.22
HDAC7-221ENST00000477203 DCCP43146 1447 aa16.41■□□□□ 0.22
HDAC7-221ENST00000477203 KDM3BQ7LBC6 1761 aa16.41■□□□□ 0.22
HDAC7-221ENST00000477203 IL2RBP14784 551 aa16.41■□□□□ 0.22
HDAC7-221ENST00000477203 UBE3BQ7Z3V4 1068 aa16.41■□□□□ 0.22
HDAC7-221ENST00000477203 SOS2Q07890 1332 aaPredicted RBP16.4■□□□□ 0.22
HDAC7-221ENST00000477203 GRM8O00222 908 aa16.4■□□□□ 0.22
HDAC7-221ENST00000477203 NEXNQ0ZGT2 675 aa16.4■□□□□ 0.22
HDAC7-221ENST00000477203 ANKRD13DQ6ZTN6 518 aa16.4■□□□□ 0.22
HDAC7-221ENST00000477203 PHRF1Q9P1Y6 1649 aaKnown RBP16.4■□□□□ 0.22
HDAC7-221ENST00000477203 CCDC85AQ96PX6 553 aaPredicted RBP16.4■□□□□ 0.22
HDAC7-221ENST00000477203 CCDC8Q9H0W5 538 aaPredicted RBP16.4■□□□□ 0.22
HDAC7-221ENST00000477203 EPHA10Q5JZY3 1008 aa16.39■□□□□ 0.21
HDAC7-221ENST00000477203 TTLL7Q6ZT98 887 aa16.39■□□□□ 0.21
HDAC7-221ENST00000477203 USP26Q9BXU7 913 aa16.39■□□□□ 0.21
HDAC7-221ENST00000477203 GZF1Q9H116 711 aaPredicted RBP16.39■□□□□ 0.21
HDAC7-221ENST00000477203 IL25Q9H293 177 aa16.39■□□□□ 0.21
HDAC7-221ENST00000477203 NCAPD2Q15021 1401 aa16.39■□□□□ 0.21
HDAC7-221ENST00000477203 ANTXR1Q9H6X2 564 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms