RNA–Protein interactions for RNA: ENST00000476806.5

RBM39-230, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-230ENST00000476806 HMOX1P09601 288 aa10.01□□□□□ -0.81
RBM39-230ENST00000476806 HSP90AB2PQ58FF8 381 aa10.01□□□□□ -0.81
RBM39-230ENST00000476806 BRINP3Q76B58 766 aa10.01□□□□□ -0.81
RBM39-230ENST00000476806 AFF2P51816 1311 aa10.01□□□□□ -0.81
RBM39-230ENST00000476806 BRPF1P55201 1214 aaPredicted RBP10□□□□□ -0.81
RBM39-230ENST00000476806 PLPP6Q8IY26 295 aa10□□□□□ -0.81
RBM39-230ENST00000476806 CDCA7LQ96GN5 454 aa10□□□□□ -0.81
RBM39-230ENST00000476806 SLC4A5Q9BY07 1137 aa10□□□□□ -0.81
RBM39-230ENST00000476806 FANCIQ9NVI1 1328 aa10□□□□□ -0.81
RBM39-230ENST00000476806 AHDC1Q5TGY3 1603 aaPredicted RBP10□□□□□ -0.81
RBM39-230ENST00000476806 KIAA0232Q92628 1395 aa10□□□□□ -0.81
RBM39-230ENST00000476806 MAP3K5Q99683 1374 aa10□□□□□ -0.81
RBM39-230ENST00000476806 NUTM2BA6NNL0 878 aaPredicted RBP9.99□□□□□ -0.81
RBM39-230ENST00000476806 NUTM2EB1AL46 878 aaPredicted RBP9.99□□□□□ -0.81
RBM39-230ENST00000476806 HSP90AB1P08238 724 aaKnown RBP9.99□□□□□ -0.81
RBM39-230ENST00000476806 PLEKHO1Q53GL0 409 aaPredicted RBP9.99□□□□□ -0.81
RBM39-230ENST00000476806 NUTM2AQ8IVF1 878 aaPredicted RBP9.99□□□□□ -0.81
RBM39-230ENST00000476806 LRRC59Q96AG4 307 aaKnown RBP9.99□□□□□ -0.81
RBM39-230ENST00000476806 CCDC136Q96JN2 1154 aa9.99□□□□□ -0.81
RBM39-230ENST00000476806 GNAT3A8MTJ3 354 aa9.98□□□□□ -0.81
RBM39-230ENST00000476806 C1orf141Q5JVX7 400 aa9.98□□□□□ -0.81
RBM39-230ENST00000476806 RAPGEF4Q8WZA2 1011 aa9.98□□□□□ -0.81
RBM39-230ENST00000476806 EYA1Q99502 592 aa9.98□□□□□ -0.81
RBM39-230ENST00000476806 QTRT2Q9H974 415 aaKnown RBP9.98□□□□□ -0.81
RBM39-230ENST00000476806 RRP7AQ9Y3A4 280 aaKnown RBP9.98□□□□□ -0.81
RBM39-230ENST00000476806 TBC1D12O60347 775 aa9.97□□□□□ -0.81
RBM39-230ENST00000476806 FTSJ3Q8IY81 847 aaKnown RBP9.97□□□□□ -0.81
RBM39-230ENST00000476806 ARHGAP45Q92619 1136 aa9.97□□□□□ -0.81
RBM39-230ENST00000476806 DLG5Q8TDM6 1919 aa9.97□□□□□ -0.81
RBM39-230ENST00000476806 CRYBG1Q9Y4K1 1723 aa9.96□□□□□ -0.81
RBM39-230ENST00000476806 HOXB7P09629 217 aa9.96□□□□□ -0.82
RBM39-230ENST00000476806 RARSP54136 660 aaKnown RBP9.96□□□□□ -0.82
RBM39-230ENST00000476806 RBM6P78332 1123 aaKnown RBP9.96□□□□□ -0.82
RBM39-230ENST00000476806 AKAP4Q5JQC9 854 aa9.96□□□□□ -0.82
RBM39-230ENST00000476806 ZKSCAN2Q63HK3 967 aa9.96□□□□□ -0.82
RBM39-230ENST00000476806 ANKRD24Q8TF21 1146 aa9.96□□□□□ -0.82
RBM39-230ENST00000476806 SMC4Q9NTJ3 1288 aa9.96□□□□□ -0.82
RBM39-230ENST00000476806 SPG7Q9UQ90 795 aa9.96□□□□□ -0.82
RBM39-230ENST00000476806 LRRC37A3O60309 1634 aa9.96□□□□□ -0.82
RBM39-230ENST00000476806 LMO7Q8WWI1 1683 aa9.96□□□□□ -0.82
RBM39-230ENST00000476806 ZNF853P0CG23 659 aa9.95□□□□□ -0.82
RBM39-230ENST00000476806 NUTM2GQ5VZR2 741 aa9.95□□□□□ -0.82
RBM39-230ENST00000476806 WNT2BQ93097 391 aa9.95□□□□□ -0.82
RBM39-230ENST00000476806 BCL2L12Q9HB09 334 aa9.95□□□□□ -0.82
RBM39-230ENST00000476806 GPHNQ9NQX3 736 aaPredicted RBP9.95□□□□□ -0.82
RBM39-230ENST00000476806 PARP4Q9UKK3 1724 aaKnown RBP9.94□□□□□ -0.82
RBM39-230ENST00000476806 COL22A1Q8NFW1 1626 aaPredicted RBP9.94□□□□□ -0.82
RBM39-230ENST00000476806 CSB-PGBD3P0DP91 1061 aa9.94□□□□□ -0.82
RBM39-230ENST00000476806 TATP17735 454 aaPredicted RBP9.94□□□□□ -0.82
RBM39-230ENST00000476806 Q6ZNB5 142 aa9.94□□□□□ -0.82
RBM39-230ENST00000476806 PRDM11Q9NQV5 511 aa9.94□□□□□ -0.82
RBM39-230ENST00000476806 DDX19BQ9UMR2 479 aa9.94□□□□□ -0.82
RBM39-230ENST00000476806 CACNA1FO60840 1977 aa9.94□□□□□ -0.82
RBM39-230ENST00000476806 PTPRCP08575 1304 aa9.93□□□□□ -0.82
RBM39-230ENST00000476806 CHL1O00533 1208 aa9.93□□□□□ -0.82
RBM39-230ENST00000476806 TEFQ10587 303 aa9.93□□□□□ -0.82
RBM39-230ENST00000476806 DSG2Q14126 1118 aa9.93□□□□□ -0.82
RBM39-230ENST00000476806 TWISTNBQ3B726 338 aaPredicted RBP9.93□□□□□ -0.82
RBM39-230ENST00000476806 PHACTR3Q96KR7 559 aa9.93□□□□□ -0.82
RBM39-230ENST00000476806 API5Q9BZZ5 524 aaKnown RBP9.93□□□□□ -0.82
RBM39-230ENST00000476806 CEMIPQ8WUJ3 1361 aa9.92□□□□□ -0.82
RBM39-230ENST00000476806 FBLN1P23142 703 aa9.92□□□□□ -0.82
RBM39-230ENST00000476806 XPCQ01831 940 aaPredicted RBP9.92□□□□□ -0.82
RBM39-230ENST00000476806 EXOSC9Q06265 439 aaKnown RBP9.92□□□□□ -0.82
RBM39-230ENST00000476806 TAF7Q15545 349 aaPredicted RBP9.92□□□□□ -0.82
RBM39-230ENST00000476806 ATF7IPQ6VMQ6 1270 aa9.92□□□□□ -0.82
RBM39-230ENST00000476806 CENPQQ7L2Z9 268 aaPredicted RBP9.92□□□□□ -0.82
RBM39-230ENST00000476806 C8orf37Q96NL8 207 aa9.92□□□□□ -0.82
RBM39-230ENST00000476806 STK31Q9BXU1 1019 aa9.92□□□□□ -0.82
RBM39-230ENST00000476806 TSPYL4Q9UJ04 414 aa9.92□□□□□ -0.82
RBM39-230ENST00000476806 LAS1LQ9Y4W2 734 aaKnown RBP9.92□□□□□ -0.82
RBM39-230ENST00000476806 ABCA3Q99758 1704 aa9.92□□□□□ -0.82
RBM39-230ENST00000476806 COL14A1Q05707 1796 aaKnown RBP9.91□□□□□ -0.82
RBM39-230ENST00000476806 WDR17Q8IZU2 1322 aa9.91□□□□□ -0.82
RBM39-230ENST00000476806 ZBTB7CA1YPR0 619 aa9.91□□□□□ -0.82
RBM39-230ENST00000476806 GOLGA8CPA6NN73 597 aa9.91□□□□□ -0.82
RBM39-230ENST00000476806 MTHFSDQ2M296 383 aaKnown RBP9.91□□□□□ -0.82
RBM39-230ENST00000476806 AEBP1Q8IUX7 1158 aa9.91□□□□□ -0.82
RBM39-230ENST00000476806 DZIP1LQ8IYY4 767 aaKnown RBP9.91□□□□□ -0.82
RBM39-230ENST00000476806 MRPL50Q8N5N7 158 aaKnown RBP9.91□□□□□ -0.82
RBM39-230ENST00000476806 ZNF454Q8N9F8 522 aa9.91□□□□□ -0.82
RBM39-230ENST00000476806 LTV1Q96GA3 475 aaPredicted RBP9.91□□□□□ -0.82
RBM39-230ENST00000476806 ZBED2Q9BTP6 218 aa9.91□□□□□ -0.82
RBM39-230ENST00000476806 CDCA7Q9BWT1 371 aaPredicted RBP9.91□□□□□ -0.82
RBM39-230ENST00000476806 MBIPQ9NS73 344 aa9.91□□□□□ -0.82
RBM39-230ENST00000476806 COL18A1P39060 1754 aa9.91□□□□□ -0.82
RBM39-230ENST00000476806 PCDH11XQ9BZA7 1347 aa9.9□□□□□ -0.82
RBM39-230ENST00000476806 PCDH11YQ9BZA8 1340 aa9.9□□□□□ -0.82
RBM39-230ENST00000476806 ZC3H6P61129 1189 aaKnown RBP9.9□□□□□ -0.82
RBM39-230ENST00000476806 NKX1-1Q15270 411 aaPredicted RBP9.9□□□□□ -0.82
RBM39-230ENST00000476806 CCDC30Q5VVM6 783 aa9.9□□□□□ -0.82
RBM39-230ENST00000476806 ZNF530Q6P9A1 599 aaPredicted RBP9.9□□□□□ -0.82
RBM39-230ENST00000476806 NLRP2Q9NX02 1062 aa9.9□□□□□ -0.82
RBM39-230ENST00000476806 HDAC5Q9UQL6 1122 aa9.9□□□□□ -0.82
RBM39-230ENST00000476806 CRB1P82279 1406 aa9.9□□□□□ -0.83
RBM39-230ENST00000476806 MVPQ14764 893 aaKnown RBP9.89□□□□□ -0.83
RBM39-230ENST00000476806 NBPF6Q5VWK0 638 aa9.89□□□□□ -0.83
RBM39-230ENST00000476806 IFNL2Q8IZJ0 200 aa9.89□□□□□ -0.83
RBM39-230ENST00000476806 FRAT1Q92837 279 aaPredicted RBP9.89□□□□□ -0.83
RBM39-230ENST00000476806 DDX17Q92841 729 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms