RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 PRIM1P49642 420 aaKnown RBP36.62■■■■□ 3.45
VEGFA-211ENST00000476772 ANXA1P04083 346 aa36.61■■■■□ 3.45
VEGFA-211ENST00000476772 AAMPQ13685 434 aa36.61■■■■□ 3.45
VEGFA-211ENST00000476772 ASAP1Q9ULH1 1129 aa36.61■■■■□ 3.45
VEGFA-211ENST00000476772 FKBP5Q13451 457 aaPredicted RBP36.61■■■■□ 3.45
VEGFA-211ENST00000476772 USP16Q9Y5T5 823 aa36.61■■■■□ 3.45
VEGFA-211ENST00000476772 PTCD1O75127 700 aaKnown RBP36.6■■■■□ 3.45
VEGFA-211ENST00000476772 ATG3Q9NT62 314 aa36.6■■■■□ 3.45
VEGFA-211ENST00000476772 PROSER3Q2NL68 480 aa36.59■■■■□ 3.45
VEGFA-211ENST00000476772 ACSBG1Q96GR2 724 aa36.58■■■■□ 3.45
VEGFA-211ENST00000476772 QTRT2Q9H974 415 aaKnown RBP36.58■■■■□ 3.45
VEGFA-211ENST00000476772 F6X3S4 739 aa36.58■■■■□ 3.45
VEGFA-211ENST00000476772 INTS3Q68E01 1043 aaKnown RBP36.57■■■■□ 3.44
VEGFA-211ENST00000476772 DDX21Q9NR30 783 aaKnown RBP eCLIP36.56■■■■□ 3.44
VEGFA-211ENST00000476772 PDIA6Q15084 440 aa36.55■■■■□ 3.44
VEGFA-211ENST00000476772 ONECUT3O60422 494 aaPredicted RBP36.54■■■■□ 3.44
VEGFA-211ENST00000476772 HYPKQ9NX55 129 aa36.53■■■■□ 3.44
VEGFA-211ENST00000476772 ZBTB40Q9NUA8 1239 aa36.52■■■■□ 3.44
VEGFA-211ENST00000476772 ZBTB7BO15156 539 aaPredicted RBP36.51■■■■□ 3.44
VEGFA-211ENST00000476772 SLC4A10Q6U841 1118 aa36.51■■■■□ 3.44
VEGFA-211ENST00000476772 FBXO41Q8TF61 875 aa36.51■■■■□ 3.44
VEGFA-211ENST00000476772 PCDHB15Q9Y5E8 787 aa36.5■■■■□ 3.43
VEGFA-211ENST00000476772 N4BP2Q86UW6 1770 aaPredicted RBP36.5■■■■□ 3.43
VEGFA-211ENST00000476772 PXDNLA1KZ92 1463 aa36.49■■■■□ 3.43
VEGFA-211ENST00000476772 SEPT12Q8IYM1 358 aa36.48■■■■□ 3.43
VEGFA-211ENST00000476772 RBM42Q9BTD8 480 aaKnown RBP36.48■■■■□ 3.43
VEGFA-211ENST00000476772 MYL6BP14649 208 aa36.48■■■■□ 3.43
VEGFA-211ENST00000476772 VSIG10Q8N0Z9 540 aa36.48■■■■□ 3.43
VEGFA-211ENST00000476772 CHMP4BQ9H444 224 aaKnown RBP36.48■■■■□ 3.43
VEGFA-211ENST00000476772 CCT4P50991 539 aaKnown RBP36.47■■■■□ 3.43
VEGFA-211ENST00000476772 PIP4K2AP48426 406 aaPredicted RBP36.46■■■■□ 3.43
VEGFA-211ENST00000476772 KDM2BQ8NHM5 1336 aa36.46■■■■□ 3.43
VEGFA-211ENST00000476772 KCNQ2O43526 872 aa36.45■■■■□ 3.43
VEGFA-211ENST00000476772 ADCY9O60503 1353 aa36.45■■■■□ 3.43
VEGFA-211ENST00000476772 ERBB4Q15303 1308 aa36.45■■■■□ 3.43
VEGFA-211ENST00000476772 LRP10Q7Z4F1 713 aa36.45■■■■□ 3.42
VEGFA-211ENST00000476772 PI4KAP2A4QPH2 592 aa36.44■■■■□ 3.42
VEGFA-211ENST00000476772 PI4KAP1Q8N8J0 262 aa36.44■■■■□ 3.42
VEGFA-211ENST00000476772 ZNF772Q68DY9 489 aaPredicted RBP36.42■■■■□ 3.42
VEGFA-211ENST00000476772 DNAJC10Q8IXB1 793 aa36.42■■■■□ 3.42
VEGFA-211ENST00000476772 SLC4A9Q96Q91 983 aa36.42■■■■□ 3.42
VEGFA-211ENST00000476772 AIMP1Q12904 312 aaKnown RBP36.42■■■■□ 3.42
VEGFA-211ENST00000476772 FAM182BQ5T319 152 aa36.42■■■■□ 3.42
VEGFA-211ENST00000476772 DNAAF4Q8WXU2 420 aa36.42■■■■□ 3.42
VEGFA-211ENST00000476772 IGHDP01880 384 aa36.41■■■■□ 3.42
VEGFA-211ENST00000476772 CENPQQ7L2Z9 268 aaPredicted RBP36.41■■■■□ 3.42
VEGFA-211ENST00000476772 TEX13AQ9BXU3 409 aaPredicted RBP36.41■■■■□ 3.42
VEGFA-211ENST00000476772 TJP1Q07157 1748 aa36.4■■■■□ 3.42
VEGFA-211ENST00000476772 NBPF26B4DH59 902 aa36.4■■■■□ 3.42
VEGFA-211ENST00000476772 A1BGP04217 495 aa36.4■■■■□ 3.42
VEGFA-211ENST00000476772 NBPF14Q5TI25 921 aa36.4■■■■□ 3.42
VEGFA-211ENST00000476772 NBPF10Q6P3W6 841 aaKnown RBP36.4■■■■□ 3.42
VEGFA-211ENST00000476772 NBPF15Q8N660 670 aa36.4■■■■□ 3.42
VEGFA-211ENST00000476772 XAGE3Q8WTP9 111 aa36.4■■■■□ 3.42
VEGFA-211ENST00000476772 KSR2Q6VAB6 950 aa36.39■■■■□ 3.42
VEGFA-211ENST00000476772 NHSQ6T4R5 1651 aa36.39■■■■□ 3.42
VEGFA-211ENST00000476772 COPS6Q7L5N1 327 aa36.39■■■■□ 3.42
VEGFA-211ENST00000476772 DDX58O95786 925 aaKnown RBP36.38■■■■□ 3.41
VEGFA-211ENST00000476772 C1orf115Q9H7X2 142 aa36.38■■■■□ 3.41
VEGFA-211ENST00000476772 MAP3K2Q9Y2U5 619 aa36.38■■■■□ 3.41
VEGFA-211ENST00000476772 MEIS3Q99687 375 aa36.37■■■■□ 3.41
VEGFA-211ENST00000476772 PALLDQ8WX93 1383 aa36.36■■■■□ 3.41
VEGFA-211ENST00000476772 ATP10DQ9P241 1426 aa36.35■■■■□ 3.41
VEGFA-211ENST00000476772 BRWD3Q6RI45 1802 aa36.34■■■■□ 3.41
VEGFA-211ENST00000476772 STARD3NLO95772 234 aa36.34■■■■□ 3.41
VEGFA-211ENST00000476772 BEND3Q5T5X7 828 aa36.33■■■■□ 3.41
VEGFA-211ENST00000476772 SMARCC1Q92922 1105 aaPredicted RBP36.33■■■■□ 3.41
VEGFA-211ENST00000476772 SRCIN1Q9C0H9 1055 aa36.33■■■■□ 3.41
VEGFA-211ENST00000476772 SBF2Q86WG5 1849 aa36.33■■■■□ 3.41
VEGFA-211ENST00000476772 RBM6P78332 1123 aaKnown RBP36.32■■■■□ 3.41
VEGFA-211ENST00000476772 PTF1AQ7RTS3 328 aa36.32■■■■□ 3.41
VEGFA-211ENST00000476772 RWDD1Q9H446 243 aaPredicted RBP36.32■■■■□ 3.4
VEGFA-211ENST00000476772 BTAF1O14981 1849 aa36.32■■■■□ 3.4
VEGFA-211ENST00000476772 RIC3Q7Z5B4 369 aa36.31■■■■□ 3.4
VEGFA-211ENST00000476772 LOC102724428A0A0B4J2F2 783 aa36.3■■■■□ 3.4
VEGFA-211ENST00000476772 CYP19A1P11511 503 aaPredicted RBP36.3■■■■□ 3.4
VEGFA-211ENST00000476772 SIK1P57059 783 aa36.3■■■■□ 3.4
VEGFA-211ENST00000476772 CICQ96RK0 1608 aaPredicted RBP36.3■■■■□ 3.4
VEGFA-211ENST00000476772 PELP1Q8IZL8 1130 aaKnown RBP36.29■■■■□ 3.4
VEGFA-211ENST00000476772 HDAC1Q13547 482 aaPredicted RBP36.29■■■■□ 3.4
VEGFA-211ENST00000476772 ANKRD13DQ6ZTN6 518 aa36.29■■■■□ 3.4
VEGFA-211ENST00000476772 ARFGEF2Q9Y6D5 1785 aa36.28■■■■□ 3.4
VEGFA-211ENST00000476772 ATP6V1AP38606 617 aa36.27■■■■□ 3.4
VEGFA-211ENST00000476772 TTLL7Q6ZT98 887 aa36.25■■■■□ 3.39
VEGFA-211ENST00000476772 KRT27Q7Z3Y8 459 aa36.25■■■■□ 3.39
VEGFA-211ENST00000476772 USP44Q9H0E7 712 aa36.25■■■■□ 3.39
VEGFA-211ENST00000476772 GNAI3P08754 354 aa36.24■■■■□ 3.39
VEGFA-211ENST00000476772 ZNF831Q5JPB2 1677 aa36.24■■■■□ 3.39
VEGFA-211ENST00000476772 NUP188Q5SRE5 1749 aa36.23■■■■□ 3.39
VEGFA-211ENST00000476772 PLBD2Q8NHP8 589 aa36.23■■■■□ 3.39
VEGFA-211ENST00000476772 ALDH1L1O75891 902 aa36.23■■■■□ 3.39
VEGFA-211ENST00000476772 ITPK1Q13572 414 aa36.23■■■■□ 3.39
VEGFA-211ENST00000476772 LINS1Q8NG48 757 aa36.23■■■■□ 3.39
VEGFA-211ENST00000476772 METTL22Q9BUU2 404 aaPredicted RBP36.23■■■■□ 3.39
VEGFA-211ENST00000476772 CWF19L2Q2TBE0 894 aaKnown RBP36.22■■■■□ 3.39
VEGFA-211ENST00000476772 SIRT2Q8IXJ6 389 aa36.22■■■■□ 3.39
VEGFA-211ENST00000476772 ZBTB1Q9Y2K1 713 aa36.22■■■■□ 3.39
VEGFA-211ENST00000476772 ZNF330Q9Y3S2 320 aaPredicted RBP36.21■■■■□ 3.39
VEGFA-211ENST00000476772 GNAI2P04899 355 aa36.2■■■■□ 3.39
VEGFA-211ENST00000476772 MYD88Q99836 296 aa36.2■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 273 ms