RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 NKAPLQ5M9Q1 402 aa6.4□□□□□ -1.38
NPHP3-207ENST00000476742 INSM2Q96T92 566 aaPredicted RBP6.4□□□□□ -1.38
NPHP3-207ENST00000476742 MKRN1Q9UHC7 482 aaKnown RBP6.4□□□□□ -1.38
NPHP3-207ENST00000476742 KDF1Q8NAX2 398 aaPredicted RBP6.39□□□□□ -1.39
NPHP3-207ENST00000476742 VRTNQ9H8Y1 702 aa6.39□□□□□ -1.39
NPHP3-207ENST00000476742 ARHGEF10LQ9HCE6 1279 aa6.39□□□□□ -1.39
NPHP3-207ENST00000476742 RBM19Q9Y4C8 960 aaKnown RBP6.39□□□□□ -1.39
NPHP3-207ENST00000476742 SUPT5HO00267 1087 aaKnown RBP6.38□□□□□ -1.39
NPHP3-207ENST00000476742 RFX1P22670 979 aa6.38□□□□□ -1.39
NPHP3-207ENST00000476742 CLN3Q13286 438 aa6.38□□□□□ -1.39
NPHP3-207ENST00000476742 LARP1Q6PKG0 1096 aaKnown RBP6.38□□□□□ -1.39
NPHP3-207ENST00000476742 RASA1P20936 1047 aa6.37□□□□□ -1.39
NPHP3-207ENST00000476742 GTF2E1P29083 439 aaPredicted RBP6.37□□□□□ -1.39
NPHP3-207ENST00000476742 GPC1P35052 558 aa6.37□□□□□ -1.39
NPHP3-207ENST00000476742 CTSOP43234 321 aaPredicted RBP6.37□□□□□ -1.39
NPHP3-207ENST00000476742 SLC27A3Q5K4L6 730 aa6.37□□□□□ -1.39
NPHP3-207ENST00000476742 CFAP70Q5T0N1 1121 aa6.37□□□□□ -1.39
NPHP3-207ENST00000476742 CCDC82Q8N4S0 544 aa6.37□□□□□ -1.39
NPHP3-207ENST00000476742 OGFOD1Q8N543 542 aa6.37□□□□□ -1.39
NPHP3-207ENST00000476742 CNKSR1Q969H4 720 aa6.37□□□□□ -1.39
NPHP3-207ENST00000476742 ESYT1Q9BSJ8 1104 aa6.37□□□□□ -1.39
NPHP3-207ENST00000476742 RAB6BQ9NRW1 208 aa6.37□□□□□ -1.39
NPHP3-207ENST00000476742 DNAAF2Q9NVR5 837 aaKnown RBP6.37□□□□□ -1.39
NPHP3-207ENST00000476742 PCDHGA11Q9Y5H2 935 aa6.37□□□□□ -1.39
NPHP3-207ENST00000476742 BACH1O14867 736 aa6.36□□□□□ -1.39
NPHP3-207ENST00000476742 INHAP05111 366 aa6.36□□□□□ -1.39
NPHP3-207ENST00000476742 RNF144AP50876 292 aaPredicted RBP6.36□□□□□ -1.39
NPHP3-207ENST00000476742 GDF10P55107 478 aa6.36□□□□□ -1.39
NPHP3-207ENST00000476742 LARGE2Q8N3Y3 721 aa6.36□□□□□ -1.39
NPHP3-207ENST00000476742 XAGE2Q96GT9 111 aa6.36□□□□□ -1.39
NPHP3-207ENST00000476742 SUV39H2Q9H5I1 410 aa6.36□□□□□ -1.39
NPHP3-207ENST00000476742 ETNK1Q9HBU6 452 aa6.36□□□□□ -1.39
NPHP3-207ENST00000476742 DYRK3O43781 588 aa6.35□□□□□ -1.39
NPHP3-207ENST00000476742 IL2RAP01589 272 aa6.35□□□□□ -1.39
NPHP3-207ENST00000476742 GATA4P43694 442 aa6.35□□□□□ -1.39
NPHP3-207ENST00000476742 KANK4Q5T7N3 995 aaPredicted RBP6.35□□□□□ -1.39
NPHP3-207ENST00000476742 LCE4AQ5TA78 99 aa6.35□□□□□ -1.39
NPHP3-207ENST00000476742 CCDC102BQ68D86 513 aa6.35□□□□□ -1.39
NPHP3-207ENST00000476742 LYSMD3Q7Z3D4 306 aa6.35□□□□□ -1.39
NPHP3-207ENST00000476742 TPCN2Q8NHX9 752 aa6.35□□□□□ -1.39
NPHP3-207ENST00000476742 WASLO00401 505 aaPredicted RBP6.34□□□□□ -1.39
NPHP3-207ENST00000476742 SCNN1DP51172 638 aa6.34□□□□□ -1.39
NPHP3-207ENST00000476742 CLDN10P78369 228 aa6.34□□□□□ -1.39
NPHP3-207ENST00000476742 CENPCQ03188 943 aa6.34□□□□□ -1.39
NPHP3-207ENST00000476742 RNF217Q8TC41 542 aa6.34□□□□□ -1.39
NPHP3-207ENST00000476742 ZNF594Q96JF6 807 aaPredicted RBP6.34□□□□□ -1.39
NPHP3-207ENST00000476742 ZSCAN10Q96SZ4 725 aaPredicted RBP6.34□□□□□ -1.39
NPHP3-207ENST00000476742 C1orf115Q9H7X2 142 aa6.34□□□□□ -1.39
NPHP3-207ENST00000476742 SENP3-EIF4A1A0A087X0R7 540 aa6.33□□□□□ -1.4
NPHP3-207ENST00000476742 FAM196BA6NMK8 535 aa6.33□□□□□ -1.4
NPHP3-207ENST00000476742 ZBTB7BO15156 539 aaPredicted RBP6.33□□□□□ -1.4
NPHP3-207ENST00000476742 TLR1Q15399 786 aa6.33□□□□□ -1.4
NPHP3-207ENST00000476742 PRSS36Q5K4E3 855 aa6.33□□□□□ -1.4
NPHP3-207ENST00000476742 FOXD4L5Q5VV16 416 aaPredicted RBP6.33□□□□□ -1.4
NPHP3-207ENST00000476742 TMEM214Q6NUQ4 689 aaKnown RBP6.33□□□□□ -1.4
NPHP3-207ENST00000476742 LINC00114Q6XXX2 140 aa6.33□□□□□ -1.4
NPHP3-207ENST00000476742 PRICKLE2Q7Z3G6 844 aa6.33□□□□□ -1.4
NPHP3-207ENST00000476742 SIX5Q8N196 739 aa6.33□□□□□ -1.4
NPHP3-207ENST00000476742 GRIP2Q9C0E4 1043 aa6.33□□□□□ -1.4
NPHP3-207ENST00000476742 SERTAD1Q9UHV2 236 aa6.33□□□□□ -1.4
NPHP3-207ENST00000476742 TMEM229AB2RXF0 380 aa6.32□□□□□ -1.4
NPHP3-207ENST00000476742 USP17L15C9J2P7 530 aa6.32□□□□□ -1.4
NPHP3-207ENST00000476742 USP17L10C9JJH3 530 aa6.32□□□□□ -1.4
NPHP3-207ENST00000476742 USP17L13C9JLJ4 530 aa6.32□□□□□ -1.4
NPHP3-207ENST00000476742 USP17L12C9JPN9 530 aa6.32□□□□□ -1.4
NPHP3-207ENST00000476742 USP17L11C9JVI0 530 aa6.32□□□□□ -1.4
NPHP3-207ENST00000476742 USP17L21D6R901 530 aa6.32□□□□□ -1.4
NPHP3-207ENST00000476742 USP17L18D6R9N7 530 aa6.32□□□□□ -1.4
NPHP3-207ENST00000476742 USP17L22D6RA61 530 aa6.32□□□□□ -1.4
NPHP3-207ENST00000476742 USP17L17D6RBQ6 530 aa6.32□□□□□ -1.4
NPHP3-207ENST00000476742 USP17L19D6RCP7 530 aa6.32□□□□□ -1.4
NPHP3-207ENST00000476742 USP17L20D6RJB6 530 aa6.32□□□□□ -1.4
NPHP3-207ENST00000476742 STAU1O95793 577 aaKnown RBP6.32□□□□□ -1.4
NPHP3-207ENST00000476742 SMTNP53814 917 aa6.32□□□□□ -1.4
NPHP3-207ENST00000476742 SEC13P55735 322 aa6.32□□□□□ -1.4
NPHP3-207ENST00000476742 USP17L24Q0WX57 530 aa6.32□□□□□ -1.4
NPHP3-207ENST00000476742 CDCA8Q53HL2 280 aa6.32□□□□□ -1.4
NPHP3-207ENST00000476742 GNASQ5JWF2 1037 aa6.32□□□□□ -1.4
NPHP3-207ENST00000476742 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.32□□□□□ -1.4
NPHP3-207ENST00000476742 PBXIP1Q96AQ6 731 aa6.32□□□□□ -1.4
NPHP3-207ENST00000476742 SLC4A9Q96Q91 983 aa6.32□□□□□ -1.4
NPHP3-207ENST00000476742 KIAA1024Q9UPX6 916 aa6.32□□□□□ -1.4
NPHP3-207ENST00000476742 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.31□□□□□ -1.4
NPHP3-207ENST00000476742 PIK3R2O00459 728 aa6.31□□□□□ -1.4
NPHP3-207ENST00000476742 JAG1P78504 1218 aa6.31□□□□□ -1.4
NPHP3-207ENST00000476742 PTK7Q13308 1070 aa6.31□□□□□ -1.4
NPHP3-207ENST00000476742 CRTC2Q53ET0 693 aaPredicted RBP6.31□□□□□ -1.4
NPHP3-207ENST00000476742 ANKMY2Q8IV38 441 aa6.31□□□□□ -1.4
NPHP3-207ENST00000476742 CCER1Q8TC90 406 aaPredicted RBP6.31□□□□□ -1.4
NPHP3-207ENST00000476742 ARID3AQ99856 593 aa6.31□□□□□ -1.4
NPHP3-207ENST00000476742 ZNF358Q9NW07 568 aa6.31□□□□□ -1.4
NPHP3-207ENST00000476742 CUEDC1Q9NWM3 386 aaPredicted RBP6.31□□□□□ -1.4
NPHP3-207ENST00000476742 HRH3Q9Y5N1 445 aa6.31□□□□□ -1.4
NPHP3-207ENST00000476742 ACIN1Q9UKV3 1341 aaKnown RBP6.3□□□□□ -1.4
NPHP3-207ENST00000476742 A6NJY4 79 aa6.3□□□□□ -1.4
NPHP3-207ENST00000476742 SPATA31C2B4DYI2 1134 aa6.3□□□□□ -1.4
NPHP3-207ENST00000476742 SHISA8B8ZZ34 492 aa6.3□□□□□ -1.4
NPHP3-207ENST00000476742 M0R2N6 131 aa6.3□□□□□ -1.4
NPHP3-207ENST00000476742 CDK2AP1O14519 115 aa6.3□□□□□ -1.4
NPHP3-207ENST00000476742 PPP1R15AO75807 674 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms