RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 C16orf71Q8IYS4 520 aaPredicted RBP17.31■□□□□ 0.36
TRAF4-209ENST00000473421 CARMIL3Q8ND23 1372 aa17.3■□□□□ 0.36
TRAF4-209ENST00000473421 FSTL1Q12841 308 aa17.3■□□□□ 0.36
TRAF4-209ENST00000473421 SLC52A2Q9HAB3 445 aa17.3■□□□□ 0.36
TRAF4-209ENST00000473421 ZBTB1Q9Y2K1 713 aa17.3■□□□□ 0.36
TRAF4-209ENST00000473421 KDM2BQ8NHM5 1336 aa17.29■□□□□ 0.36
TRAF4-209ENST00000473421 NRXN2Q9P2S2 1712 aa17.28■□□□□ 0.36
TRAF4-209ENST00000473421 RNMTO43148 476 aaKnown RBP17.28■□□□□ 0.36
TRAF4-209ENST00000473421 ZPR1O75312 459 aa17.28■□□□□ 0.36
TRAF4-209ENST00000473421 HMOX1P09601 288 aa17.28■□□□□ 0.36
TRAF4-209ENST00000473421 TNRC6CQ9HCJ0 1690 aaKnown RBP17.27■□□□□ 0.36
TRAF4-209ENST00000473421 AKAP4Q5JQC9 854 aa17.27■□□□□ 0.36
TRAF4-209ENST00000473421 NARFQ9UHQ1 456 aa17.27■□□□□ 0.36
TRAF4-209ENST00000473421 TIMELESSQ9UNS1 1208 aa17.27■□□□□ 0.36
TRAF4-209ENST00000473421 VIRMAQ69YN4 1812 aaKnown RBP17.26■□□□□ 0.35
TRAF4-209ENST00000473421 POTECB2RU33 542 aa17.26■□□□□ 0.35
TRAF4-209ENST00000473421 NFKBIEO00221 500 aa17.26■□□□□ 0.35
TRAF4-209ENST00000473421 CAPN15O75808 1086 aa17.26■□□□□ 0.35
TRAF4-209ENST00000473421 SERPINB2P05120 415 aa17.26■□□□□ 0.35
TRAF4-209ENST00000473421 EIF4G2P78344 907 aaKnown RBP eCLIP17.26■□□□□ 0.35
TRAF4-209ENST00000473421 MTHFSDQ2M296 383 aaKnown RBP17.26■□□□□ 0.35
TRAF4-209ENST00000473421 CCDC24Q8N4L8 307 aa17.26■□□□□ 0.35
TRAF4-209ENST00000473421 CCDC88AQ3V6T2 1871 aa17.26■□□□□ 0.35
TRAF4-209ENST00000473421 COL15A1P39059 1388 aa17.26■□□□□ 0.35
TRAF4-209ENST00000473421 MRC1P22897 1456 aa17.25■□□□□ 0.35
TRAF4-209ENST00000473421 AMER1Q5JTC6 1135 aaPredicted RBP17.25■□□□□ 0.35
TRAF4-209ENST00000473421 PCGF6Q9BYE7 350 aa17.25■□□□□ 0.35
TRAF4-209ENST00000473421 CANXP27824 592 aaKnown RBP17.24■□□□□ 0.35
TRAF4-209ENST00000473421 BICDL1Q6ZP65 573 aa17.24■□□□□ 0.35
TRAF4-209ENST00000473421 DLEC1Q9Y238 1755 aa17.24■□□□□ 0.35
TRAF4-209ENST00000473421 GLTPD2A6NH11 291 aa17.23■□□□□ 0.35
TRAF4-209ENST00000473421 LMNB1P20700 586 aa17.23■□□□□ 0.35
TRAF4-209ENST00000473421 C2CD5Q86YS7 1000 aa17.23■□□□□ 0.35
TRAF4-209ENST00000473421 SMC1BQ8NDV3 1235 aa17.23■□□□□ 0.35
TRAF4-209ENST00000473421 TTLL6Q8N841 843 aa17.22■□□□□ 0.35
TRAF4-209ENST00000473421 ZNF219Q9P2Y4 722 aaPredicted RBP17.22■□□□□ 0.35
TRAF4-209ENST00000473421 ANKRD31Q8N7Z5 1873 aa17.22■□□□□ 0.35
TRAF4-209ENST00000473421 TBC1D9BQ66K14 1250 aa17.21■□□□□ 0.35
TRAF4-209ENST00000473421 KNSTRNQ9Y448 316 aa17.21■□□□□ 0.35
TRAF4-209ENST00000473421 TIAM2Q8IVF5 1701 aa17.21■□□□□ 0.35
TRAF4-209ENST00000473421 UBR2Q8IWV8 1755 aa17.2■□□□□ 0.34
TRAF4-209ENST00000473421 VEGFAP15692 232 aaPredicted RBP17.2■□□□□ 0.34
TRAF4-209ENST00000473421 EIF5P55010 431 aaKnown RBP17.2■□□□□ 0.34
TRAF4-209ENST00000473421 ZNF496Q96IT1 587 aaPredicted RBP17.19■□□□□ 0.34
TRAF4-209ENST00000473421 COL11A2P13942 1736 aaPredicted RBP17.18■□□□□ 0.34
TRAF4-209ENST00000473421 H0YIN7 160 aa17.18■□□□□ 0.34
TRAF4-209ENST00000473421 C21orf2O43822 256 aa17.18■□□□□ 0.34
TRAF4-209ENST00000473421 POTEIP0CG38 1075 aa17.18■□□□□ 0.34
TRAF4-209ENST00000473421 POTEJP0CG39 1038 aa17.18■□□□□ 0.34
TRAF4-209ENST00000473421 HSPA1AP0DMV8 641 aaKnown RBP17.18■□□□□ 0.34
TRAF4-209ENST00000473421 HSPA1BP0DMV9 641 aaKnown RBP17.18■□□□□ 0.34
TRAF4-209ENST00000473421 TNS4Q8IZW8 715 aa17.18■□□□□ 0.34
TRAF4-209ENST00000473421 IL17REQ8NFR9 667 aa17.18■□□□□ 0.34
TRAF4-209ENST00000473421 TBC1D2BQ9UPU7 963 aa17.18■□□□□ 0.34
TRAF4-209ENST00000473421 ZC3H4Q9UPT8 1303 aaKnown RBP17.18■□□□□ 0.34
TRAF4-209ENST00000473421 VSIG10Q8N0Z9 540 aa17.17■□□□□ 0.34
TRAF4-209ENST00000473421 KCNQ3O43525 872 aa17.16■□□□□ 0.34
TRAF4-209ENST00000473421 PRR5LQ6MZQ0 368 aa17.16■□□□□ 0.34
TRAF4-209ENST00000473421 ZNF622Q969S3 477 aaKnown RBP eCLIP17.16■□□□□ 0.34
TRAF4-209ENST00000473421 PER1O15534 1290 aaPredicted RBP17.15■□□□□ 0.34
TRAF4-209ENST00000473421 A1BGP04217 495 aa17.15■□□□□ 0.34
TRAF4-209ENST00000473421 CC2D1BQ5T0F9 858 aaKnown RBP17.15■□□□□ 0.34
TRAF4-209ENST00000473421 ZNF330Q9Y3S2 320 aaPredicted RBP17.15■□□□□ 0.34
TRAF4-209ENST00000473421 KIF7Q2M1P5 1343 aa17.15■□□□□ 0.34
TRAF4-209ENST00000473421 SLX4Q8IY92 1834 aa17.14■□□□□ 0.34
TRAF4-209ENST00000473421 FER1L6Q2WGJ9 1857 aa17.14■□□□□ 0.33
TRAF4-209ENST00000473421 PIP4K2AP48426 406 aaPredicted RBP17.14■□□□□ 0.33
TRAF4-209ENST00000473421 DIAPH1O60610 1272 aaKnown RBP17.13■□□□□ 0.33
TRAF4-209ENST00000473421 DDNO94850 711 aaPredicted RBP17.13■□□□□ 0.33
TRAF4-209ENST00000473421 CNGB1Q14028 1251 aaPredicted RBP17.13■□□□□ 0.33
TRAF4-209ENST00000473421 ERFEQ4G0M1 354 aa17.13■□□□□ 0.33
TRAF4-209ENST00000473421 BRIP1Q9BX63 1249 aa17.13■□□□□ 0.33
TRAF4-209ENST00000473421 CLSPNQ9HAW4 1339 aa17.13■□□□□ 0.33
TRAF4-209ENST00000473421 HEG1Q9ULI3 1381 aa17.13■□□□□ 0.33
TRAF4-209ENST00000473421 COL3A1P02461 1466 aaPredicted RBP17.12■□□□□ 0.33
TRAF4-209ENST00000473421 DICER1Q9UPY3 1922 aaKnown RBP17.12■□□□□ 0.33
TRAF4-209ENST00000473421 CAMTA2O94983 1202 aa17.12■□□□□ 0.33
TRAF4-209ENST00000473421 STARD3NLO95772 234 aa17.12■□□□□ 0.33
TRAF4-209ENST00000473421 ZNF790Q6PG37 636 aa17.12■□□□□ 0.33
TRAF4-209ENST00000473421 SCN7AQ01118 1682 aa17.12■□□□□ 0.33
TRAF4-209ENST00000473421 SIPA1L3O60292 1781 aaPredicted RBP17.11■□□□□ 0.33
TRAF4-209ENST00000473421 PRAMEF22A3QJZ6 481 aa17.11■□□□□ 0.33
TRAF4-209ENST00000473421 CACNA1SQ13698 1873 aa17.11■□□□□ 0.33
TRAF4-209ENST00000473421 OLFM4Q6UX06 510 aa17.1■□□□□ 0.33
TRAF4-209ENST00000473421 TTC5Q8N0Z6 440 aa17.1■□□□□ 0.33
TRAF4-209ENST00000473421 PHACTR3Q96KR7 559 aa17.1■□□□□ 0.33
TRAF4-209ENST00000473421 MKRN1Q9UHC7 482 aaKnown RBP17.1■□□□□ 0.33
TRAF4-209ENST00000473421 DPY19L2Q6NUT2 758 aa17.09■□□□□ 0.33
TRAF4-209ENST00000473421 A0A087WZG4 1122 aa17.08■□□□□ 0.32
TRAF4-209ENST00000473421 GNAT3A8MTJ3 354 aa17.08■□□□□ 0.32
TRAF4-209ENST00000473421 U2SURPO15042 1029 aaKnown RBP17.08■□□□□ 0.32
TRAF4-209ENST00000473421 SRGNP10124 158 aa17.08■□□□□ 0.32
TRAF4-209ENST00000473421 PDE6BP35913 854 aa17.08■□□□□ 0.32
TRAF4-209ENST00000473421 IL6STP40189 918 aaPredicted RBP17.08■□□□□ 0.32
TRAF4-209ENST00000473421 PRPF40BQ6NWY9 871 aaKnown RBP17.08■□□□□ 0.32
TRAF4-209ENST00000473421 USP16Q9Y5T5 823 aa17.08■□□□□ 0.32
TRAF4-209ENST00000473421 TEFQ10587 303 aa17.07■□□□□ 0.32
TRAF4-209ENST00000473421 CHADLQ6NUI6 762 aa17.07■□□□□ 0.32
TRAF4-209ENST00000473421 C7orf43Q8WVR3 580 aa17.07■□□□□ 0.32
TRAF4-209ENST00000473421 TAOK3Q9H2K8 898 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms