RNA–Protein interactions for RNA: ENST00000473282.6

CDK5RAP2-209, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 5,956 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-209ENST00000473282 PALMDQ9NP74 551 aa9.52□□□□□ -0.89
CDK5RAP2-209ENST00000473282 FAM69CQ0P6D2 419 aa9.52□□□□□ -0.89
CDK5RAP2-209ENST00000473282 CHCHD3Q9NX63 227 aaKnown RBP9.52□□□□□ -0.89
CDK5RAP2-209ENST00000473282 RANBP1P43487 201 aa9.52□□□□□ -0.89
CDK5RAP2-209ENST00000473282 GKAP1Q5VSY0 366 aaPredicted RBP9.52□□□□□ -0.89
CDK5RAP2-209ENST00000473282 ERC1Q8IUD2 1116 aa9.52□□□□□ -0.89
CDK5RAP2-209ENST00000473282 IQCEQ6IPM2 695 aa9.52□□□□□ -0.89
CDK5RAP2-209ENST00000473282 UBXN4Q92575 508 aa9.52□□□□□ -0.89
CDK5RAP2-209ENST00000473282 HECW1Q76N89 1606 aa9.51□□□□□ -0.89
CDK5RAP2-209ENST00000473282 TOP2BQ02880 1626 aa9.51□□□□□ -0.89
CDK5RAP2-209ENST00000473282 DHX8Q14562 1220 aaKnown RBP9.51□□□□□ -0.89
CDK5RAP2-209ENST00000473282 USP33Q8TEY7 942 aa9.51□□□□□ -0.89
CDK5RAP2-209ENST00000473282 COG6Q9Y2V7 657 aa9.51□□□□□ -0.89
CDK5RAP2-209ENST00000473282 C1orf141Q5JVX7 400 aa9.51□□□□□ -0.89
CDK5RAP2-209ENST00000473282 ANKRD45Q5TZF3 282 aa9.51□□□□□ -0.89
CDK5RAP2-209ENST00000473282 ZKSCAN2Q63HK3 967 aa9.51□□□□□ -0.89
CDK5RAP2-209ENST00000473282 CHMP5Q9NZZ3 219 aa9.51□□□□□ -0.89
CDK5RAP2-209ENST00000473282 hCG_2014768A0A024R1R8 64 aa9.51□□□□□ -0.89
CDK5RAP2-209ENST00000473282 ST18O60284 1047 aa9.51□□□□□ -0.89
CDK5RAP2-209ENST00000473282 SPECC1LQ69YQ0 1117 aa9.51□□□□□ -0.89
CDK5RAP2-209ENST00000473282 CTAGE6Q86UF2 777 aa9.51□□□□□ -0.89
CDK5RAP2-209ENST00000473282 NCAPGQ9BPX3 1015 aa9.51□□□□□ -0.89
CDK5RAP2-209ENST00000473282 HOOK1Q9UJC3 728 aaKnown RBP9.51□□□□□ -0.89
CDK5RAP2-209ENST00000473282 FILIP1Q7Z7B0 1213 aa9.51□□□□□ -0.89
CDK5RAP2-209ENST00000473282 ATP6V1DQ9Y5K8 247 aa9.51□□□□□ -0.89
CDK5RAP2-209ENST00000473282 APAF1O14727 1248 aa9.5□□□□□ -0.89
CDK5RAP2-209ENST00000473282 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.5□□□□□ -0.89
CDK5RAP2-209ENST00000473282 SH3GL3Q99963 347 aa9.5□□□□□ -0.89
CDK5RAP2-209ENST00000473282 TRIM6Q9C030 488 aaPredicted RBP9.5□□□□□ -0.89
CDK5RAP2-209ENST00000473282 RAI14Q9P0K7 980 aa9.5□□□□□ -0.89
CDK5RAP2-209ENST00000473282 ARAP1Q96P48 1450 aa9.5□□□□□ -0.89
CDK5RAP2-209ENST00000473282 STAMBPO95630 424 aa9.5□□□□□ -0.89
CDK5RAP2-209ENST00000473282 NBPF9Q3BBW0 867 aa9.5□□□□□ -0.89
CDK5RAP2-209ENST00000473282 KLHDC4Q8TBB5 520 aa9.5□□□□□ -0.89
CDK5RAP2-209ENST00000473282 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.5□□□□□ -0.897e-6■■■■□ 20.6
CDK5RAP2-209ENST00000473282 NUB1Q9Y5A7 615 aa9.5□□□□□ -0.89
CDK5RAP2-209ENST00000473282 EHBP1L1Q8N3D4 1523 aa9.5□□□□□ -0.89
CDK5RAP2-209ENST00000473282 CREB3O43889 395 aa9.5□□□□□ -0.89
CDK5RAP2-209ENST00000473282 PSMD2Q13200 908 aa9.5□□□□□ -0.89
CDK5RAP2-209ENST00000473282 TMEM57Q8N5G2 664 aa9.5□□□□□ -0.89
CDK5RAP2-209ENST00000473282 FLCNQ8NFG4 579 aa9.5□□□□□ -0.89
CDK5RAP2-209ENST00000473282 OPTNQ96CV9 577 aa9.5□□□□□ -0.89
CDK5RAP2-209ENST00000473282 HDAC9Q9UKV0 1011 aa9.5□□□□□ -0.89
CDK5RAP2-209ENST00000473282 PPP1R12AO14974 1030 aaPredicted RBP9.5□□□□□ -0.89
CDK5RAP2-209ENST00000473282 ISM2Q6H9L7 571 aa9.5□□□□□ -0.89
CDK5RAP2-209ENST00000473282 RINLQ6ZS11 566 aa9.5□□□□□ -0.89
CDK5RAP2-209ENST00000473282 EFHD2Q96C19 240 aaPredicted RBP9.5□□□□□ -0.89
CDK5RAP2-209ENST00000473282 LRRFIP1Q32MZ4 808 aaKnown RBP9.49□□□□□ -0.89
CDK5RAP2-209ENST00000473282 IQCA1Q86XH1 822 aa9.49□□□□□ -0.89
CDK5RAP2-209ENST00000473282 STMN4Q9H169 189 aaPredicted RBP9.49□□□□□ -0.89
CDK5RAP2-209ENST00000473282 CCDC7Q96M83 1385 aa9.49□□□□□ -0.89
CDK5RAP2-209ENST00000473282 ERCC3P19447 782 aa9.49□□□□□ -0.89
CDK5RAP2-209ENST00000473282 PSMA4P25789 261 aaKnown RBP9.49□□□□□ -0.89
CDK5RAP2-209ENST00000473282 USP5P45974 858 aa9.49□□□□□ -0.89
CDK5RAP2-209ENST00000473282 EVA1CP58658 441 aa9.49□□□□□ -0.89
CDK5RAP2-209ENST00000473282 PHLDB2Q86SQ0 1253 aa9.49□□□□□ -0.89
CDK5RAP2-209ENST00000473282 MARCH6O60337 910 aa9.49□□□□□ -0.89
CDK5RAP2-209ENST00000473282 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.49□□□□□ -0.89
CDK5RAP2-209ENST00000473282 RILPL2Q969X0 211 aa9.49□□□□□ -0.89
CDK5RAP2-209ENST00000473282 VEZTQ9HBM0 779 aa9.49□□□□□ -0.89
CDK5RAP2-209ENST00000473282 H3BQV1 296 aa9.49□□□□□ -0.89
CDK5RAP2-209ENST00000473282 PPFIA2O75334 1257 aa9.49□□□□□ -0.89
CDK5RAP2-209ENST00000473282 FBF1Q8TES7 1133 aa9.49□□□□□ -0.89
CDK5RAP2-209ENST00000473282 TRIM11Q96F44 468 aa9.49□□□□□ -0.89
CDK5RAP2-209ENST00000473282 TTC14Q96N46 770 aa9.49□□□□□ -0.89
CDK5RAP2-209ENST00000473282 PRG4Q92954 1404 aaPredicted RBP9.49□□□□□ -0.89
CDK5RAP2-209ENST00000473282 SNAPC4Q5SXM2 1469 aa9.49□□□□□ -0.89
CDK5RAP2-209ENST00000473282 CCDC196A0A1B0GTZ2 297 aa9.49□□□□□ -0.89
CDK5RAP2-209ENST00000473282 RAB3IL1Q8TBN0 382 aa9.49□□□□□ -0.89
CDK5RAP2-209ENST00000473282 KIF7Q2M1P5 1343 aa9.48□□□□□ -0.89
CDK5RAP2-209ENST00000473282 NDC80O14777 642 aa9.48□□□□□ -0.89
CDK5RAP2-209ENST00000473282 ZNF131P52739 623 aa9.48□□□□□ -0.89
CDK5RAP2-209ENST00000473282 FAPQ12884 760 aa9.48□□□□□ -0.89
CDK5RAP2-209ENST00000473282 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.48□□□□□ -0.89
CDK5RAP2-209ENST00000473282 CCDC47Q96A33 483 aaKnown RBP9.48□□□□□ -0.89
CDK5RAP2-209ENST00000473282 HMGXB3Q12766 1538 aa9.48□□□□□ -0.89
CDK5RAP2-209ENST00000473282 CNTLNQ9NXG0 1405 aa9.48□□□□□ -0.89
CDK5RAP2-209ENST00000473282 SYNJ2O15056 1496 aa9.48□□□□□ -0.89
CDK5RAP2-209ENST00000473282 GRPEL1Q9HAV7 217 aa9.48□□□□□ -0.89
CDK5RAP2-209ENST00000473282 VCX3BQ9H321 246 aa9.48□□□□□ -0.89
CDK5RAP2-209ENST00000473282 MTUS1Q9ULD2 1270 aa9.48□□□□□ -0.89
CDK5RAP2-209ENST00000473282 EFCAB5A4FU69 1503 aa9.48□□□□□ -0.89
CDK5RAP2-209ENST00000473282 TPD52P55327 224 aaPredicted RBP9.48□□□□□ -0.89
CDK5RAP2-209ENST00000473282 PDCD2Q16342 344 aaPredicted RBP9.48□□□□□ -0.89
CDK5RAP2-209ENST00000473282 HOOK3Q86VS8 718 aa9.48□□□□□ -0.89
CDK5RAP2-209ENST00000473282 SDCCAG8Q86SQ7 713 aaPredicted RBP9.47□□□□□ -0.89
CDK5RAP2-209ENST00000473282 CFTRP13569 1480 aa9.47□□□□□ -0.89
CDK5RAP2-209ENST00000473282 IFT140Q96RY7 1462 aa9.47□□□□□ -0.89
CDK5RAP2-209ENST00000473282 SPECC1L-ADORA2AF8WAN1 911 aa9.47□□□□□ -0.89
CDK5RAP2-209ENST00000473282 G3V3G9 751 aa9.47□□□□□ -0.89
CDK5RAP2-209ENST00000473282 DCAF8Q5TAQ9 597 aa9.47□□□□□ -0.89
CDK5RAP2-209ENST00000473282 NECTIN2Q92692 538 aa9.47□□□□□ -0.89
CDK5RAP2-209ENST00000473282 FAM210AQ96ND0 272 aa9.47□□□□□ -0.89
CDK5RAP2-209ENST00000473282 SUPT6HQ7KZ85 1726 aaKnown RBP9.47□□□□□ -0.89
CDK5RAP2-209ENST00000473282 PRR16Q569H4 304 aa9.47□□□□□ -0.89
CDK5RAP2-209ENST00000473282 NBPF11Q86T75 865 aa9.47□□□□□ -0.89
CDK5RAP2-209ENST00000473282 MSANTD4Q8NCY6 345 aa9.47□□□□□ -0.89
CDK5RAP2-209ENST00000473282 GIMAP4Q9NUV9 329 aa9.47□□□□□ -0.89
CDK5RAP2-209ENST00000473282 NGEFQ8N5V2 710 aa9.47□□□□□ -0.89
CDK5RAP2-209ENST00000473282 ANKRD50Q9ULJ7 1429 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms