RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 HSP90AB2PQ58FF8 381 aa14.43□□□□□ -0.1
CDHR3-209ENST00000472116 USP42Q9H9J4 1324 aaKnown RBP14.42□□□□□ -0.1
CDHR3-209ENST00000472116 FER1L6Q2WGJ9 1857 aa14.42□□□□□ -0.1
CDHR3-209ENST00000472116 SRP68Q9UHB9 627 aaKnown RBP14.42□□□□□ -0.1
CDHR3-209ENST00000472116 KIF24Q5T7B8 1368 aa14.42□□□□□ -0.1
CDHR3-209ENST00000472116 KIF20BQ96Q89 1820 aa14.41□□□□□ -0.1
CDHR3-209ENST00000472116 POLRMTO00411 1230 aaKnown RBP14.41□□□□□ -0.1
CDHR3-209ENST00000472116 ZPR1O75312 459 aa14.41□□□□□ -0.1
CDHR3-209ENST00000472116 POTEIP0CG38 1075 aa14.41□□□□□ -0.1
CDHR3-209ENST00000472116 POTEJP0CG39 1038 aa14.41□□□□□ -0.1
CDHR3-209ENST00000472116 L3MBTL2Q969R5 705 aa14.41□□□□□ -0.1
CDHR3-209ENST00000472116 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.41□□□□□ -0.14e-10■■□□□ 12.5
CDHR3-209ENST00000472116 WDR33Q9C0J8 1336 aaKnown RBP14.41□□□□□ -0.1
CDHR3-209ENST00000472116 CASP8AP2Q9UKL3 1982 aa14.4□□□□□ -0.1
CDHR3-209ENST00000472116 RASSF10A6NK89 507 aa14.4□□□□□ -0.1
CDHR3-209ENST00000472116 H0YIN7 160 aa14.4□□□□□ -0.1
CDHR3-209ENST00000472116 NFKBIEO00221 500 aa14.4□□□□□ -0.1
CDHR3-209ENST00000472116 PUS7Q96PZ0 661 aaKnown RBP14.4□□□□□ -0.1
CDHR3-209ENST00000472116 ABT1Q9ULW3 272 aaKnown RBP14.4□□□□□ -0.1
CDHR3-209ENST00000472116 CACNA1SQ13698 1873 aa14.4□□□□□ -0.1
CDHR3-209ENST00000472116 PHKG2P15735 406 aa14.39□□□□□ -0.11
CDHR3-209ENST00000472116 PAXIP1Q6ZW49 1069 aaPredicted RBP14.39□□□□□ -0.11
CDHR3-209ENST00000472116 CLEC11AQ9Y240 323 aa14.39□□□□□ -0.11
CDHR3-209ENST00000472116 DDNO94850 711 aaPredicted RBP14.38□□□□□ -0.11
CDHR3-209ENST00000472116 EAPPQ56P03 285 aaPredicted RBP14.38□□□□□ -0.11
CDHR3-209ENST00000472116 C2CD5Q86YS7 1000 aa14.38□□□□□ -0.11
CDHR3-209ENST00000472116 SLC4A9Q96Q91 983 aa14.38□□□□□ -0.11
CDHR3-209ENST00000472116 NRXN2Q9P2S2 1712 aa14.38□□□□□ -0.11
CDHR3-209ENST00000472116 TM4SF1P30408 202 aa14.37□□□□□ -0.11
CDHR3-209ENST00000472116 CRKLP46109 303 aaKnown RBP14.37□□□□□ -0.11
CDHR3-209ENST00000472116 GGNBP2Q9H3C7 697 aa14.37□□□□□ -0.11
CDHR3-209ENST00000472116 ERVV-2B6SEH9 535 aa14.36□□□□□ -0.11
CDHR3-209ENST00000472116 HSP90AB1P08238 724 aaKnown RBP14.36□□□□□ -0.11
CDHR3-209ENST00000472116 ECE1P42892 770 aa14.36□□□□□ -0.11
CDHR3-209ENST00000472116 CARD11Q9BXL7 1154 aa14.36□□□□□ -0.11
CDHR3-209ENST00000472116 TAOK3Q9H2K8 898 aa14.36□□□□□ -0.11
CDHR3-209ENST00000472116 ANKRD26Q9UPS8 1709 aa14.35□□□□□ -0.11
CDHR3-209ENST00000472116 THSD7BQ9C0I4 1608 aa14.35□□□□□ -0.11
CDHR3-209ENST00000472116 TAF1DQ9H5J8 278 aaPredicted RBP14.35□□□□□ -0.11
CDHR3-209ENST00000472116 U3KPZ7 1027 aaPredicted RBP14.35□□□□□ -0.11
CDHR3-209ENST00000472116 TRPM7Q96QT4 1865 aa14.35□□□□□ -0.11
CDHR3-209ENST00000472116 NCAPD2Q15021 1401 aa14.34□□□□□ -0.11
CDHR3-209ENST00000472116 TNRC18O15417 2968 aaPredicted RBP14.34□□□□□ -0.11
CDHR3-209ENST00000472116 PTCD1O75127 700 aaKnown RBP14.34□□□□□ -0.11
CDHR3-209ENST00000472116 ITGBL1O95965 494 aaPredicted RBP14.34□□□□□ -0.11
CDHR3-209ENST00000472116 CABP4P57796 275 aa14.34□□□□□ -0.11
CDHR3-209ENST00000472116 GRM1Q13255 1194 aa14.34□□□□□ -0.11
CDHR3-209ENST00000472116 USPL1Q5W0Q7 1092 aa14.34□□□□□ -0.11
CDHR3-209ENST00000472116 ZNF622Q969S3 477 aaKnown RBP eCLIP14.34□□□□□ -0.11
CDHR3-209ENST00000472116 MCOLN1Q9GZU1 580 aa14.34□□□□□ -0.11
CDHR3-209ENST00000472116 ZNF219Q9P2Y4 722 aaPredicted RBP14.34□□□□□ -0.11
CDHR3-209ENST00000472116 TONSLQ96HA7 1378 aa14.34□□□□□ -0.11
CDHR3-209ENST00000472116 TJP1Q07157 1748 aa14.33□□□□□ -0.12
CDHR3-209ENST00000472116 FYB1O15117 783 aa14.33□□□□□ -0.12
CDHR3-209ENST00000472116 PPM1GO15355 546 aaPredicted RBP14.33□□□□□ -0.12
CDHR3-209ENST00000472116 C21orf2O43822 256 aa14.33□□□□□ -0.12
CDHR3-209ENST00000472116 SERPINB2P05120 415 aa14.33□□□□□ -0.12
CDHR3-209ENST00000472116 PDZRN3Q9UPQ7 1066 aa14.33□□□□□ -0.12
CDHR3-209ENST00000472116 PRPF38BQ5VTL8 546 aaKnown RBP14.32□□□□□ -0.12
CDHR3-209ENST00000472116 PNMA8AQ86V59 439 aaPredicted RBP14.32□□□□□ -0.12
CDHR3-209ENST00000472116 L3MBTL3Q96JM7 780 aaPredicted RBP14.32□□□□□ -0.12
CDHR3-209ENST00000472116 CAPNS2Q96L46 248 aa14.32□□□□□ -0.12
CDHR3-209ENST00000472116 HACL1Q9UJ83 578 aa14.32□□□□□ -0.12
CDHR3-209ENST00000472116 LTBP3Q9NS15 1303 aa14.32□□□□□ -0.12
CDHR3-209ENST00000472116 ADAMTS7Q9UKP4 1686 aa14.32□□□□□ -0.12
CDHR3-209ENST00000472116 CA12O43570 354 aa14.31□□□□□ -0.12
CDHR3-209ENST00000472116 DGKZQ13574 1117 aa14.31□□□□□ -0.12
CDHR3-209ENST00000472116 NFIXQ14938 502 aa14.31□□□□□ -0.12
CDHR3-209ENST00000472116 SOGA3Q5TF21 947 aa14.31□□□□□ -0.12
CDHR3-209ENST00000472116 CNTROBQ8N137 903 aa14.31□□□□□ -0.12
CDHR3-209ENST00000472116 GPR101Q96P66 508 aaPredicted RBP14.31□□□□□ -0.12
CDHR3-209ENST00000472116 ANKRD31Q8N7Z5 1873 aa14.31□□□□□ -0.12
CDHR3-209ENST00000472116 SLC24A1O60721 1099 aa14.3□□□□□ -0.12
CDHR3-209ENST00000472116 KCNA4P22459 653 aa14.3□□□□□ -0.12
CDHR3-209ENST00000472116 TSKSQ9UJT2 592 aa14.3□□□□□ -0.12
CDHR3-209ENST00000472116 ADAMTSL1Q8N6G6 1762 aa14.29□□□□□ -0.12
CDHR3-209ENST00000472116 EPHX2P34913 555 aa14.29□□□□□ -0.12
CDHR3-209ENST00000472116 PDE6BP35913 854 aa14.29□□□□□ -0.12
CDHR3-209ENST00000472116 EYA1Q99502 592 aa14.29□□□□□ -0.12
CDHR3-209ENST00000472116 EMILIN1Q9Y6C2 1016 aa14.29□□□□□ -0.12
CDHR3-209ENST00000472116 ARFGEF2Q9Y6D5 1785 aa14.29□□□□□ -0.12
CDHR3-209ENST00000472116 COL11A2P13942 1736 aaPredicted RBP14.28□□□□□ -0.12
CDHR3-209ENST00000472116 MAP1SQ66K74 1059 aaPredicted RBP14.28□□□□□ -0.12
CDHR3-209ENST00000472116 NARFQ9UHQ1 456 aa14.28□□□□□ -0.12
CDHR3-209ENST00000472116 SLX4Q8IY92 1834 aa14.27□□□□□ -0.12
CDHR3-209ENST00000472116 LTBP1Q14766 1721 aa14.27□□□□□ -0.12
CDHR3-209ENST00000472116 COL15A1P39059 1388 aa14.26□□□□□ -0.13
CDHR3-209ENST00000472116 CARMIL3Q8ND23 1372 aa14.26□□□□□ -0.13
CDHR3-209ENST00000472116 SOS1Q07889 1333 aaPredicted RBP14.26□□□□□ -0.13
CDHR3-209ENST00000472116 NPHP1O15259 732 aa14.26□□□□□ -0.13
CDHR3-209ENST00000472116 MAP2K2P36507 400 aa14.26□□□□□ -0.13
CDHR3-209ENST00000472116 CYP4F22Q6NT55 531 aa14.26□□□□□ -0.13
CDHR3-209ENST00000472116 INTS5Q6P9B9 1019 aaKnown RBP14.26□□□□□ -0.13
CDHR3-209ENST00000472116 CNKSR1Q969H4 720 aa14.26□□□□□ -0.13
CDHR3-209ENST00000472116 SPINK5Q9NQ38 1064 aaPredicted RBP14.26□□□□□ -0.13
CDHR3-209ENST00000472116 DDX21Q9NR30 783 aaKnown RBP eCLIP14.26□□□□□ -0.13
CDHR3-209ENST00000472116 ST20-MTHFSA0A0A6YYL1 179 aa14.25□□□□□ -0.13
CDHR3-209ENST00000472116 DSG3P32926 999 aa14.25□□□□□ -0.13
CDHR3-209ENST00000472116 MTHFSP49914 203 aa14.25□□□□□ -0.13
CDHR3-209ENST00000472116 PLEKHO1Q53GL0 409 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms