RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 OXCT2Q9BYC2 517 aaPredicted RBP10.43□□□□□ -0.74
CD46-213ENST00000471987 ZDHHC3Q9NYG2 299 aa10.43□□□□□ -0.74
CD46-213ENST00000471987 SCHIP1Q9P0W5 487 aaPredicted RBP10.43□□□□□ -0.74
CD46-213ENST00000471987 USP3Q9Y6I4 520 aa10.43□□□□□ -0.74
CD46-213ENST00000471987 ARSJQ5FYB0 599 aaPredicted RBP10.42□□□□□ -0.74
CD46-213ENST00000471987 TMEM151AQ8N4L1 468 aa10.42□□□□□ -0.74
CD46-213ENST00000471987 NEDD1Q8NHV4 660 aa10.42□□□□□ -0.74
CD46-213ENST00000471987 ABHD17AQ96GS6 310 aa10.42□□□□□ -0.74
CD46-213ENST00000471987 NDFIP2Q9NV92 336 aa10.42□□□□□ -0.74
CD46-213ENST00000471987 BNIP3LO60238 219 aa10.41□□□□□ -0.74
CD46-213ENST00000471987 GDF11O95390 407 aa10.41□□□□□ -0.74
CD46-213ENST00000471987 DNAAF2Q9NVR5 837 aaKnown RBP10.41□□□□□ -0.74
CD46-213ENST00000471987 PCDHGC4Q9Y5F7 938 aa10.41□□□□□ -0.74
CD46-213ENST00000471987 OIP5O43482 229 aa10.4□□□□□ -0.74
CD46-213ENST00000471987 FGFR3P22607 806 aa10.4□□□□□ -0.74
CD46-213ENST00000471987 IRS1P35568 1242 aa10.4□□□□□ -0.74
CD46-213ENST00000471987 KANK3Q6NY19 840 aa10.4□□□□□ -0.74
CD46-213ENST00000471987 TPCN2Q8NHX9 752 aa10.4□□□□□ -0.74
CD46-213ENST00000471987 KLRG1Q96E93 195 aa10.4□□□□□ -0.74
CD46-213ENST00000471987 ZCCHC2Q9C0B9 1178 aaKnown RBP10.4□□□□□ -0.74
CD46-213ENST00000471987 GDF2Q9UK05 429 aaPredicted RBP10.4□□□□□ -0.74
CD46-213ENST00000471987 A0A1W2PNR3 127 aa10.39□□□□□ -0.75
CD46-213ENST00000471987 BMP4P12644 408 aa10.39□□□□□ -0.75
CD46-213ENST00000471987 CCDC102BQ68D86 513 aa10.39□□□□□ -0.75
CD46-213ENST00000471987 GLMNQ92990 594 aa10.39□□□□□ -0.75
CD46-213ENST00000471987 ZBTB7BO15156 539 aaPredicted RBP10.38□□□□□ -0.75
CD46-213ENST00000471987 EPHA4P54764 986 aa10.38□□□□□ -0.75
CD46-213ENST00000471987 CLDN10P78369 228 aa10.38□□□□□ -0.75
CD46-213ENST00000471987 FOXK2Q01167 660 aa10.38□□□□□ -0.75
CD46-213ENST00000471987 LARGE2Q8N3Y3 721 aa10.38□□□□□ -0.75
CD46-213ENST00000471987 MKRN1Q9UHC7 482 aaKnown RBP10.38□□□□□ -0.75
CD46-213ENST00000471987 KIAA1024Q9UPX6 916 aa10.38□□□□□ -0.75
CD46-213ENST00000471987 PALM3A6NDB9 673 aaPredicted RBP10.37□□□□□ -0.75
CD46-213ENST00000471987 A6NJR5 290 aa10.37□□□□□ -0.75
CD46-213ENST00000471987 ATXN7O15265 892 aaPredicted RBP10.37□□□□□ -0.75
CD46-213ENST00000471987 TEAD4Q15561 434 aa10.37□□□□□ -0.75
CD46-213ENST00000471987 PODNQ7Z5L7 613 aa10.37□□□□□ -0.75
CD46-213ENST00000471987 TNS4Q8IZW8 715 aa10.37□□□□□ -0.75
CD46-213ENST00000471987 OGFOD1Q8N543 542 aa10.37□□□□□ -0.75
CD46-213ENST00000471987 GOLGA6L1Q8N7Z2 621 aa10.37□□□□□ -0.75
CD46-213ENST00000471987 L3MBTL2Q969R5 705 aa10.37□□□□□ -0.75
CD46-213ENST00000471987 ZIC5Q96T25 663 aa10.37□□□□□ -0.75
CD46-213ENST00000471987 PARP3Q9Y6F1 533 aa10.37□□□□□ -0.75
CD46-213ENST00000471987 GJA3Q9Y6H8 435 aa10.37□□□□□ -0.75
CD46-213ENST00000471987 PHF20L1A8MW92 1017 aa10.36□□□□□ -0.75
CD46-213ENST00000471987 CTBSQ01459 385 aa10.36□□□□□ -0.75
CD46-213ENST00000471987 BICDL1Q6ZP65 573 aa10.36□□□□□ -0.75
CD46-213ENST00000471987 SLC9A9Q8IVB4 645 aa10.36□□□□□ -0.75
CD46-213ENST00000471987 BEND7Q8N7W2 519 aaPredicted RBP10.36□□□□□ -0.75
CD46-213ENST00000471987 NOS2P35228 1153 aa10.35□□□□□ -0.75
CD46-213ENST00000471987 KCTD17Q8N5Z5 321 aa10.35□□□□□ -0.75
CD46-213ENST00000471987 GALNT6Q8NCL4 622 aa10.35□□□□□ -0.75
CD46-213ENST00000471987 ZDHHC1Q8WTX9 485 aa10.35□□□□□ -0.75
CD46-213ENST00000471987 RBM19Q9Y4C8 960 aaKnown RBP10.35□□□□□ -0.75
CD46-213ENST00000471987 M0R2N6 131 aa10.34□□□□□ -0.75
CD46-213ENST00000471987 C2CD2LO14523 706 aa10.34□□□□□ -0.75
CD46-213ENST00000471987 TXLNAP40222 546 aa10.34□□□□□ -0.75
CD46-213ENST00000471987 SIX5Q8N196 739 aa10.34□□□□□ -0.75
CD46-213ENST00000471987 TFIP11Q9UBB9 837 aaKnown RBP10.34□□□□□ -0.75
CD46-213ENST00000471987 ZNF232Q9UNY5 417 aa10.34□□□□□ -0.75
CD46-213ENST00000471987 DCDC2BA2VCK2 349 aa10.33□□□□□ -0.76
CD46-213ENST00000471987 MAPTP10636 758 aaKnown RBP10.33□□□□□ -0.76
CD46-213ENST00000471987 TNP2Q05952 138 aa10.33□□□□□ -0.76
CD46-213ENST00000471987 TBCELQ5QJ74 424 aa10.33□□□□□ -0.76
CD46-213ENST00000471987 EDARADDQ8WWZ3 215 aa10.33□□□□□ -0.76
CD46-213ENST00000471987 CALR3Q96L12 384 aaKnown RBP10.33□□□□□ -0.76
CD46-213ENST00000471987 MAFBQ9Y5Q3 323 aaPredicted RBP10.33□□□□□ -0.76
CD46-213ENST00000471987 DNMT3AQ9Y6K1 912 aaPredicted RBP10.33□□□□□ -0.76
CD46-213ENST00000471987 CNTNAP5Q8WYK1 1306 aa10.33□□□□□ -0.76
CD46-213ENST00000471987 SERTM1A2A2V5 107 aa10.32□□□□□ -0.76
CD46-213ENST00000471987 KHNYNO15037 678 aaKnown RBP10.32□□□□□ -0.76
CD46-213ENST00000471987 FAM157BP0CG42 384 aa10.32□□□□□ -0.76
CD46-213ENST00000471987 FAM182BQ5T319 152 aa10.32□□□□□ -0.76
CD46-213ENST00000471987 SAMD5Q5TGI4 173 aa10.32□□□□□ -0.76
CD46-213ENST00000471987 SLCO4C1Q6ZQN7 724 aa10.32□□□□□ -0.76
CD46-213ENST00000471987 ZNF594Q96JF6 807 aaPredicted RBP10.32□□□□□ -0.76
CD46-213ENST00000471987 CHMP3Q9Y3E7 222 aa10.32□□□□□ -0.76
CD46-213ENST00000471987 GPC6Q9Y625 555 aaPredicted RBP10.32□□□□□ -0.76
CD46-213ENST00000471987 SHISA8B8ZZ34 492 aa10.31□□□□□ -0.76
CD46-213ENST00000471987 EML1O00423 815 aa10.31□□□□□ -0.76
CD46-213ENST00000471987 ARAFP10398 606 aa10.31□□□□□ -0.76
CD46-213ENST00000471987 RASA1P20936 1047 aa10.31□□□□□ -0.76
CD46-213ENST00000471987 PSMA6P60900 246 aaKnown RBP10.31□□□□□ -0.76
CD46-213ENST00000471987 C1orf229Q6ZS94 237 aaPredicted RBP10.31□□□□□ -0.76
CD46-213ENST00000471987 GGA1Q9UJY5 639 aa10.31□□□□□ -0.76
CD46-213ENST00000471987 TSPAN10Q9H1Z9 355 aaPredicted RBP10.3□□□□□ -0.76
CD46-213ENST00000471987 NEUROD4Q9HD90 331 aa10.3□□□□□ -0.76
CD46-213ENST00000471987 CD33P20138 364 aa10.29□□□□□ -0.76
CD46-213ENST00000471987 PPP1R12CQ9BZL4 782 aa10.29□□□□□ -0.76
CD46-213ENST00000471987 SFI1A8K8P3 1242 aa10.28□□□□□ -0.76
CD46-213ENST00000471987 LAMC2Q13753 1193 aa10.28□□□□□ -0.76
CD46-213ENST00000471987 TSEN2Q8NCE0 465 aaKnown RBP10.28□□□□□ -0.76
CD46-213ENST00000471987 AVENQ9NQS1 362 aaPredicted RBP10.28□□□□□ -0.76
CD46-213ENST00000471987 DKK1O94907 266 aa10.27□□□□□ -0.77
CD46-213ENST00000471987 AMPD1P23109 780 aa10.27□□□□□ -0.77
CD46-213ENST00000471987 HIRAP54198 1017 aaPredicted RBP10.27□□□□□ -0.77
CD46-213ENST00000471987 SEC13P55735 322 aa10.27□□□□□ -0.77
CD46-213ENST00000471987 C1orf53Q5VUE5 145 aa10.27□□□□□ -0.77
CD46-213ENST00000471987 LARP1Q6PKG0 1096 aaKnown RBP10.27□□□□□ -0.77
CD46-213ENST00000471987 LRRC69Q6ZNQ3 347 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 183.3 ms