RNA–Protein interactions for RNA: ENST00000471215.1

BUD23-215, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, human

TSL 2

Gene BUD23, Length 3,886 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BUD23-215	ENST00000471215	HDAC5	Q9UQL6	1122 aa		12.03	□□□□□ -0.48
BUD23-215	ENST00000471215	SETD1B	Q9UPS6	1966 aa	Known RBP	12.02	□□□□□ -0.48
BUD23-215	ENST00000471215	GC	P02774	474 aa		12.02	□□□□□ -0.48
BUD23-215	ENST00000471215	NLRP2	Q9NX02	1062 aa		12.02	□□□□□ -0.48
BUD23-215	ENST00000471215	IBTK	Q9P2D0	1353 aa	Predicted RBP	12.02	□□□□□ -0.49
BUD23-215	ENST00000471215	AMOT	Q4VCS5	1084 aa		12.02	□□□□□ -0.49
BUD23-215	ENST00000471215	PROSER2	Q86WR7	435 aa	Predicted RBP	12.02	□□□□□ -0.49
BUD23-215	ENST00000471215	ANKRD24	Q8TF21	1146 aa		12.02	□□□□□ -0.49
BUD23-215	ENST00000471215	PALD1	Q9ULE6	856 aa		12.02	□□□□□ -0.49
BUD23-215	ENST00000471215	MAP3K2	Q9Y2U5	619 aa		12.02	□□□□□ -0.49
BUD23-215	ENST00000471215	DIP2A	Q14689	1571 aa		12.02	□□□□□ -0.49
BUD23-215	ENST00000471215	SSH3	Q8TE77	659 aa		12.01	□□□□□ -0.49
BUD23-215	ENST00000471215	RIC3	Q7Z5B4	369 aa		12.01	□□□□□ -0.49
BUD23-215	ENST00000471215	RAPGEF4	Q8WZA2	1011 aa		12.01	□□□□□ -0.49
BUD23-215	ENST00000471215	PEAK1	Q9H792	1746 aa		12.01	□□□□□ -0.49
BUD23-215	ENST00000471215	DDX58	O95786	925 aa	Known RBP	12.01	□□□□□ -0.49
BUD23-215	ENST00000471215	G3BP1	Q13283	466 aa	Known RBP eCLIP	12	□□□□□ -0.49	7e-6	■□□□□ 8.9
BUD23-215	ENST00000471215	CHAMP1	Q96JM3	812 aa		12	□□□□□ -0.49
BUD23-215	ENST00000471215	LARP6	Q9BRS8	491 aa	Known RBP	12	□□□□□ -0.49
BUD23-215	ENST00000471215	ANKAR	Q7Z5J8	1434 aa		12	□□□□□ -0.49
BUD23-215	ENST00000471215	RUFY2	Q8WXA3	655 aa		12	□□□□□ -0.49
BUD23-215	ENST00000471215	SPG7	Q9UQ90	795 aa		12	□□□□□ -0.49
BUD23-215	ENST00000471215	RBM27	Q9P2N5	1060 aa	Known RBP	12	□□□□□ -0.49
BUD23-215	ENST00000471215	NRK	Q7Z2Y5	1582 aa		11.99	□□□□□ -0.49
BUD23-215	ENST00000471215	RNMT	O43148	476 aa	Known RBP	11.99	□□□□□ -0.49
BUD23-215	ENST00000471215	MYL6B	P14649	208 aa		11.99	□□□□□ -0.49
BUD23-215	ENST00000471215	STAP2	Q9UGK3	403 aa		11.99	□□□□□ -0.49
BUD23-215	ENST00000471215	CWF19L2	Q2TBE0	894 aa	Known RBP	11.99	□□□□□ -0.49
BUD23-215	ENST00000471215	SIL1	Q9H173	461 aa		11.99	□□□□□ -0.49
BUD23-215	ENST00000471215	ESPN	B1AK53	854 aa		11.99	□□□□□ -0.49
BUD23-215	ENST00000471215	ANAPC15	P60006	121 aa		11.99	□□□□□ -0.49
BUD23-215	ENST00000471215	NEXN	Q0ZGT2	675 aa		11.99	□□□□□ -0.49
BUD23-215	ENST00000471215	BEND3	Q5T5X7	828 aa		11.99	□□□□□ -0.49
BUD23-215	ENST00000471215	KRT28	Q7Z3Y7	464 aa		11.99	□□□□□ -0.49
BUD23-215	ENST00000471215	LMBRD1	Q9NUN5	540 aa		11.99	□□□□□ -0.49
BUD23-215	ENST00000471215	PA2G4	Q9UQ80	394 aa	Known RBP	11.99	□□□□□ -0.49
BUD23-215	ENST00000471215	RIMS1	Q86UR5	1692 aa	Known RBP	11.98	□□□□□ -0.49
BUD23-215	ENST00000471215	AACS	Q86V21	672 aa		11.98	□□□□□ -0.49
BUD23-215	ENST00000471215	GLRX3	O76003	335 aa	Known RBP	11.98	□□□□□ -0.49
BUD23-215	ENST00000471215	ZSCAN23	Q3MJ62	389 aa		11.98	□□□□□ -0.49
BUD23-215	ENST00000471215	HOXB7	P09629	217 aa		11.97	□□□□□ -0.49
BUD23-215	ENST00000471215	MSN	P26038	577 aa	Known RBP	11.97	□□□□□ -0.49
BUD23-215	ENST00000471215	SLC39A6	Q13433	755 aa		11.97	□□□□□ -0.49
BUD23-215	ENST00000471215	KSR2	Q6VAB6	950 aa		11.97	□□□□□ -0.49
BUD23-215	ENST00000471215	KIF13A	Q9H1H9	1805 aa		11.97	□□□□□ -0.49
BUD23-215	ENST00000471215	CCDC173	Q0VFZ6	552 aa		11.97	□□□□□ -0.49
BUD23-215	ENST00000471215	ERC1	Q8IUD2	1116 aa		11.96	□□□□□ -0.49
BUD23-215	ENST00000471215	RNF214	Q8ND24	703 aa		11.96	□□□□□ -0.49
BUD23-215	ENST00000471215	DDX54	Q8TDD1	881 aa	Known RBP	11.96	□□□□□ -0.49
BUD23-215	ENST00000471215	GDPD2	Q9HCC8	539 aa		11.96	□□□□□ -0.49
BUD23-215	ENST00000471215	SYCE3	A1L190	88 aa		11.96	□□□□□ -0.49
BUD23-215	ENST00000471215	PRAMEF22	A3QJZ6	481 aa		11.96	□□□□□ -0.49
BUD23-215	ENST00000471215	PROSER3	Q2NL68	480 aa		11.96	□□□□□ -0.49
BUD23-215	ENST00000471215	SYAP1	Q96A49	352 aa	Predicted RBP	11.96	□□□□□ -0.49
BUD23-215	ENST00000471215	CCDC8	Q9H0W5	538 aa	Predicted RBP	11.96	□□□□□ -0.49
BUD23-215	ENST00000471215	HYPK	Q9NX55	129 aa		11.96	□□□□□ -0.49
BUD23-215	ENST00000471215	SMC3	Q9UQE7	1217 aa		11.96	□□□□□ -0.49
BUD23-215	ENST00000471215	ARHGAP23	Q9P227	1491 aa		11.96	□□□□□ -0.49
BUD23-215	ENST00000471215	TTC5	Q8N0Z6	440 aa		11.96	□□□□□ -0.5
BUD23-215	ENST00000471215	ECHDC1	Q9NTX5	307 aa		11.96	□□□□□ -0.5
BUD23-215	ENST00000471215	SLIT1	O75093	1534 aa		11.96	□□□□□ -0.5
BUD23-215	ENST00000471215	MBD3	O95983	291 aa		11.95	□□□□□ -0.5
BUD23-215	ENST00000471215	CAST	P20810	708 aa	Known RBP	11.95	□□□□□ -0.5
BUD23-215	ENST00000471215	CCDC9	Q9Y3X0	531 aa	Known RBP	11.95	□□□□□ -0.5
BUD23-215	ENST00000471215	AOX1	Q06278	1338 aa		11.95	□□□□□ -0.5
BUD23-215	ENST00000471215	GIGYF1	O75420	1035 aa	Predicted RBP	11.95	□□□□□ -0.5
BUD23-215	ENST00000471215	PTMA	P06454	111 aa	Known RBP	11.95	□□□□□ -0.5
BUD23-215	ENST00000471215	ZKSCAN1	P17029	563 aa	Predicted RBP	11.95	□□□□□ -0.5
BUD23-215	ENST00000471215	TAT	P17735	454 aa	Predicted RBP	11.95	□□□□□ -0.5
BUD23-215	ENST00000471215	ARHGEF25	Q86VW2	580 aa		11.95	□□□□□ -0.5
BUD23-215	ENST00000471215	SGSM2	O43147	1006 aa		11.95	□□□□□ -0.5
BUD23-215	ENST00000471215	ATF3	P18847	181 aa		11.95	□□□□□ -0.5
BUD23-215	ENST00000471215	POLA2	Q14181	598 aa		11.95	□□□□□ -0.5
BUD23-215	ENST00000471215	CLEC17A	Q6ZS10	378 aa		11.95	□□□□□ -0.5
BUD23-215	ENST00000471215	ZDHHC9	Q9Y397	364 aa		11.95	□□□□□ -0.5
BUD23-215	ENST00000471215	SALL3	Q9BXA9	1300 aa		11.95	□□□□□ -0.5
BUD23-215	ENST00000471215	ALDH1L1	O75891	902 aa		11.94	□□□□□ -0.5
BUD23-215	ENST00000471215	PRIM1	P49642	420 aa	Known RBP	11.94	□□□□□ -0.5
BUD23-215	ENST00000471215	PRPF40B	Q6NWY9	871 aa	Known RBP	11.94	□□□□□ -0.5
BUD23-215	ENST00000471215	CHMP3	Q9Y3E7	222 aa		11.94	□□□□□ -0.5
BUD23-215	ENST00000471215	WDR33	Q9C0J8	1336 aa	Known RBP	11.94	□□□□□ -0.5
BUD23-215	ENST00000471215	HSPA4	P34932	840 aa		11.94	□□□□□ -0.5
BUD23-215	ENST00000471215	JAKMIP1	Q96N16	626 aa	Known RBP	11.94	□□□□□ -0.5
BUD23-215	ENST00000471215	RGPD8	O14715	1765 aa	Predicted RBP	11.94	□□□□□ -0.5
BUD23-215	ENST00000471215	CYP2E1	P05181	493 aa	Predicted RBP	11.94	□□□□□ -0.5
BUD23-215	ENST00000471215	CPA1	P15085	419 aa		11.94	□□□□□ -0.5
BUD23-215	ENST00000471215	JARID2	Q92833	1246 aa	Predicted RBP	11.94	□□□□□ -0.5
BUD23-215	ENST00000471215	FSD1	Q9BTV5	496 aa		11.94	□□□□□ -0.5
BUD23-215	ENST00000471215	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.94	□□□□□ -0.5
BUD23-215	ENST00000471215	GRM8	O00222	908 aa		11.93	□□□□□ -0.5
BUD23-215	ENST00000471215	PI4K2B	Q8TCG2	481 aa		11.93	□□□□□ -0.5
BUD23-215	ENST00000471215	INTS4	Q96HW7	963 aa	Known RBP	11.93	□□□□□ -0.5
BUD23-215	ENST00000471215	BOLA2	Q9H3K6	86 aa		11.93	□□□□□ -0.5
BUD23-215	ENST00000471215	AK9	Q5TCS8	1911 aa		11.93	□□□□□ -0.5
BUD23-215	ENST00000471215	CLCN1	P35523	988 aa		11.93	□□□□□ -0.5
BUD23-215	ENST00000471215	PIP4K2A	P48426	406 aa	Predicted RBP	11.93	□□□□□ -0.5
BUD23-215	ENST00000471215	LINS1	Q8NG48	757 aa		11.93	□□□□□ -0.5
BUD23-215	ENST00000471215	IL25	Q9H293	177 aa		11.93	□□□□□ -0.5
BUD23-215	ENST00000471215	NFATC2IP	Q8NCF5	419 aa		11.93	□□□□□ -0.5
BUD23-215	ENST00000471215	GPT2	Q8TD30	523 aa		11.93	□□□□□ -0.5

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