RNA–Protein interactions for RNA: ENST00000471215.1

BUD23-215, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, humanhuman

TSL 2

Gene BUD23, Length 3,886 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BUD23-215ENST00000471215 NISCHQ9Y2I1 1504 aa20.12■□□□□ 0.81
BUD23-215ENST00000471215 SHROOM4Q9ULL8 1493 aa17.53■□□□□ 0.4
BUD23-215ENST00000471215 DCAF8L2P0C7V8 631 aa17.36■□□□□ 0.37
BUD23-215ENST00000471215 SUPT5HO00267 1087 aaKnown RBP17.27■□□□□ 0.36
BUD23-215ENST00000471215 ZCCHC6Q5VYS8 1495 aaKnown RBP16.95■□□□□ 0.3
BUD23-215ENST00000471215 CCDC180Q9P1Z9 1646 aa16.94■□□□□ 0.3
BUD23-215ENST00000471215 CHIC1Q5VXU3 224 aa16.54■□□□□ 0.24
BUD23-215ENST00000471215 DCAF1Q9Y4B6 1507 aa16.36■□□□□ 0.21
BUD23-215ENST00000471215 MYO15BQ96JP2 1530 aa16.25■□□□□ 0.19
BUD23-215ENST00000471215 PCGF6Q9BYE7 350 aa16.18■□□□□ 0.18
BUD23-215ENST00000471215 LOC105371045A0A1W2PR82 267 aa16.17■□□□□ 0.18
BUD23-215ENST00000471215 ABCC9O60706 1549 aa16.14■□□□□ 0.17
BUD23-215ENST00000471215 SCRIBQ14160 1630 aa16.13■□□□□ 0.17
BUD23-215ENST00000471215 TRIM41Q8WV44 630 aa16.04■□□□□ 0.16
BUD23-215ENST00000471215 FAM9AQ8IZU1 332 aaPredicted RBP16.02■□□□□ 0.16
BUD23-215ENST00000471215 EHMT2Q96KQ7 1210 aa15.99■□□□□ 0.15
BUD23-215ENST00000471215 HRCP23327 699 aa15.98■□□□□ 0.15
BUD23-215ENST00000471215 RSF1Q96T23 1441 aaPredicted RBP15.97■□□□□ 0.15
BUD23-215ENST00000471215 NACADO15069 1562 aa15.83■□□□□ 0.12
BUD23-215ENST00000471215 TRIM26Q12899 539 aaPredicted RBP15.78■□□□□ 0.12
BUD23-215ENST00000471215 CECR2Q9BXF3 1484 aa15.77■□□□□ 0.12
BUD23-215ENST00000471215 PPARGC1BQ86YN6 1023 aaKnown RBP15.73■□□□□ 0.11
BUD23-215ENST00000471215 RB1CC1Q8TDY2 1594 aa15.72■□□□□ 0.11
BUD23-215ENST00000471215 MROH2BQ7Z745 1585 aa15.67■□□□□ 0.1
BUD23-215ENST00000471215 PABPN1Q86U42 306 aaKnown RBP eCLIP15.58■□□□□ 0.086e-6■■□□□ 12
BUD23-215ENST00000471215 WIZO95785 1651 aa15.55■□□□□ 0.08
BUD23-215ENST00000471215 BAZ1AQ9NRL2 1556 aaPredicted RBP15.48■□□□□ 0.07
BUD23-215ENST00000471215 ZEB1P37275 1124 aaPredicted RBP15.46■□□□□ 0.07
BUD23-215ENST00000471215 TTBK1Q5TCY1 1321 aaPredicted RBP15.44■□□□□ 0.06
BUD23-215ENST00000471215 UBTFP17480 764 aaKnown RBP15.38■□□□□ 0.05
BUD23-215ENST00000471215 CCDC88BA6NC98 1476 aa15.32■□□□□ 0.04
BUD23-215ENST00000471215 SMARCA4P51532 1647 aa15.29■□□□□ 0.04
BUD23-215ENST00000471215 TOP2AP11388 1531 aaKnown RBP15.29■□□□□ 0.04
BUD23-215ENST00000471215 CCER1Q8TC90 406 aaPredicted RBP15.28■□□□□ 0.04
BUD23-215ENST00000471215 ABCC8Q09428 1581 aa15.27■□□□□ 0.04
BUD23-215ENST00000471215 CSRNP3Q8WYN3 585 aa15.25■□□□□ 0.03
BUD23-215ENST00000471215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.24■□□□□ 0.03
BUD23-215ENST00000471215 RANGAP1P46060 587 aaPredicted RBP15.2■□□□□ 0.02
BUD23-215ENST00000471215 SOGA1O94964 1423 aa15.19■□□□□ 0.02
BUD23-215ENST00000471215 SMARCA2P51531 1590 aa15.18■□□□□ 0.02
BUD23-215ENST00000471215 UNC13AQ9UPW8 1703 aa15.13■□□□□ 0.01
BUD23-215ENST00000471215 CEP162Q5TB80 1403 aa15.11■□□□□ 0.01
BUD23-215ENST00000471215 APLP2Q06481 763 aa15.11■□□□□ 0.01
BUD23-215ENST00000471215 WRNQ14191 1432 aaPredicted RBP eCLIP15.1■□□□□ 0.01
BUD23-215ENST00000471215 TNIKQ9UKE5 1360 aa15.08■□□□□ 0
BUD23-215ENST00000471215 EIF4G1Q04637 1599 aaKnown RBP15.07■□□□□ 0
BUD23-215ENST00000471215 EEA1Q15075 1411 aa15.07■□□□□ 0
BUD23-215ENST00000471215 RUSC2Q8N2Y8 1516 aa15.07■□□□□ 0
BUD23-215ENST00000471215 BICRAQ9NZM4 1560 aa15.05■□□□□ 0
BUD23-215ENST00000471215 BAZ1BQ9UIG0 1483 aaKnown RBP15.05■□□□□ -0
BUD23-215ENST00000471215 ATAD2BQ9ULI0 1458 aa15□□□□□ -0.01
BUD23-215ENST00000471215 GOLGA3Q08378 1498 aa15□□□□□ -0.01
BUD23-215ENST00000471215 HNRNPUL2Q1KMD3 747 aaKnown RBP14.99□□□□□ -0.01
BUD23-215ENST00000471215 CEP164Q9UPV0 1460 aa14.91□□□□□ -0.02
BUD23-215ENST00000471215 CLIP1P30622 1438 aa14.9□□□□□ -0.02
BUD23-215ENST00000471215 PEG3Q9GZU2 1588 aa14.87□□□□□ -0.03
BUD23-215ENST00000471215 DIEXFQ68CQ4 756 aaKnown RBP14.86□□□□□ -0.03
BUD23-215ENST00000471215 SYNJ1O43426 1573 aa14.85□□□□□ -0.03
BUD23-215ENST00000471215 RAPGEF2Q9Y4G8 1499 aa14.79□□□□□ -0.04
BUD23-215ENST00000471215 VPS8Q8N3P4 1428 aa14.74□□□□□ -0.05
BUD23-215ENST00000471215 ZNF316A6NFI3 1004 aaPredicted RBP14.72□□□□□ -0.05
BUD23-215ENST00000471215 CENPBP07199 599 aaPredicted RBP14.72□□□□□ -0.05
BUD23-215ENST00000471215 KIF21BO75037 1637 aa14.71□□□□□ -0.06
BUD23-215ENST00000471215 ITGAEP38570 1179 aa14.7□□□□□ -0.06
BUD23-215ENST00000471215 NCAPD3P42695 1498 aa14.69□□□□□ -0.06
BUD23-215ENST00000471215 ATP1B4Q9UN42 357 aaPredicted RBP14.69□□□□□ -0.06
BUD23-215ENST00000471215 SCAF1Q9H7N4 1312 aaKnown RBP14.68□□□□□ -0.06
BUD23-215ENST00000471215 KIF27Q86VH2 1401 aa14.68□□□□□ -0.06
BUD23-215ENST00000471215 YTHDC1Q96MU7 727 aaKnown RBP14.66□□□□□ -0.06
BUD23-215ENST00000471215 TOP2BQ02880 1626 aa14.65□□□□□ -0.06
BUD23-215ENST00000471215 ACIN1Q9UKV3 1341 aaKnown RBP14.63□□□□□ -0.07
BUD23-215ENST00000471215 KANK4Q5T7N3 995 aaPredicted RBP14.61□□□□□ -0.07
BUD23-215ENST00000471215 NEUROD1Q13562 356 aa14.61□□□□□ -0.07
BUD23-215ENST00000471215 HMGXB3Q12766 1538 aa14.59□□□□□ -0.07
BUD23-215ENST00000471215 P3H3Q8IVL6 736 aa14.58□□□□□ -0.08
BUD23-215ENST00000471215 CUX1P39880 1505 aa14.57□□□□□ -0.08
BUD23-215ENST00000471215 CFTRP13569 1480 aa14.56□□□□□ -0.08
BUD23-215ENST00000471215 PRXQ9BXM0 1461 aa14.56□□□□□ -0.08
BUD23-215ENST00000471215 CUX2O14529 1486 aa14.55□□□□□ -0.08
BUD23-215ENST00000471215 GTF3C3Q9Y5Q9 886 aa14.54□□□□□ -0.08
BUD23-215ENST00000471215 CADPSQ9ULU8 1353 aa14.53□□□□□ -0.08
BUD23-215ENST00000471215 BIVM-ERCC5R4GMW8 1640 aa14.51□□□□□ -0.09
BUD23-215ENST00000471215 ERICH3Q5RHP9 1530 aa14.51□□□□□ -0.09
BUD23-215ENST00000471215 FAM50AQ14320 339 aaKnown RBP14.49□□□□□ -0.09
BUD23-215ENST00000471215 MIER1Q8N108 512 aa14.49□□□□□ -0.09
BUD23-215ENST00000471215 CARMIL1Q5VZK9 1371 aa14.49□□□□□ -0.09
BUD23-215ENST00000471215 ARAP1Q96P48 1450 aa14.48□□□□□ -0.09
BUD23-215ENST00000471215 IGF1RP08069 1367 aa14.47□□□□□ -0.09
BUD23-215ENST00000471215 CCNB3Q8WWL7 1395 aa14.43□□□□□ -0.1
BUD23-215ENST00000471215 PELP1Q8IZL8 1130 aaKnown RBP14.41□□□□□ -0.1
BUD23-215ENST00000471215 FGD5Q6ZNL6 1462 aa14.41□□□□□ -0.1
BUD23-215ENST00000471215 ARHGAP35Q9NRY4 1499 aa14.41□□□□□ -0.1
BUD23-215ENST00000471215 CLSPNQ9HAW4 1339 aa14.39□□□□□ -0.11
BUD23-215ENST00000471215 DHX57Q6P158 1386 aaKnown RBP14.39□□□□□ -0.11
BUD23-215ENST00000471215 FANCD2Q9BXW9 1451 aa14.37□□□□□ -0.11
BUD23-215ENST00000471215 CC2D2AQ9P2K1 1620 aa14.34□□□□□ -0.11
BUD23-215ENST00000471215 RAD54L2Q9Y4B4 1467 aa14.32□□□□□ -0.12
BUD23-215ENST00000471215 RRBP1Q9P2E9 1410 aaKnown RBP14.32□□□□□ -0.12
BUD23-215ENST00000471215 FHAD1B1AJZ9 1412 aa14.3□□□□□ -0.12
BUD23-215ENST00000471215 RAB3GAP2Q9H2M9 1393 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms