RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 QTRT2Q9H974 415 aaKnown RBP9.02□□□□□ -0.97
RBM39-227ENST00000470563 STIM2Q9P246 746 aa9.02□□□□□ -0.97
RBM39-227ENST00000470563 GPC6Q9Y625 555 aaPredicted RBP9.02□□□□□ -0.97
RBM39-227ENST00000470563 UNCXA6NJT0 531 aa9.01□□□□□ -0.97
RBM39-227ENST00000470563 TIMP2P16035 220 aa9.01□□□□□ -0.97
RBM39-227ENST00000470563 COX20Q5RI15 118 aa9.01□□□□□ -0.97
RBM39-227ENST00000470563 BCL2L13Q9BXK5 485 aa9.01□□□□□ -0.97
RBM39-227ENST00000470563 SERTM1A2A2V5 107 aa9□□□□□ -0.97
RBM39-227ENST00000470563 LGR5O75473 907 aa9□□□□□ -0.97
RBM39-227ENST00000470563 MAPK1P28482 360 aa9□□□□□ -0.97
RBM39-227ENST00000470563 FGD1P98174 961 aa9□□□□□ -0.97
RBM39-227ENST00000470563 CENPCQ03188 943 aa9□□□□□ -0.97
RBM39-227ENST00000470563 RTN1Q16799 776 aa9□□□□□ -0.97
RBM39-227ENST00000470563 MEIOBQ8N635 442 aa9□□□□□ -0.97
RBM39-227ENST00000470563 ITPKCQ96DU7 683 aa9□□□□□ -0.97
RBM39-227ENST00000470563 NDUFB5O43674 189 aa8.99□□□□□ -0.97
RBM39-227ENST00000470563 ZIC2O95409 532 aaPredicted RBP8.99□□□□□ -0.97
RBM39-227ENST00000470563 MPSTP25325 297 aa8.99□□□□□ -0.97
RBM39-227ENST00000470563 NOS2P35228 1153 aa8.99□□□□□ -0.97
RBM39-227ENST00000470563 ZNF326Q5BKZ1 582 aaKnown RBP8.99□□□□□ -0.97
RBM39-227ENST00000470563 RHBDD1Q8TEB9 315 aa8.99□□□□□ -0.97
RBM39-227ENST00000470563 ZDHHC1Q8WTX9 485 aa8.99□□□□□ -0.97
RBM39-227ENST00000470563 ALKBH8Q96BT7 664 aaKnown RBP8.99□□□□□ -0.97
RBM39-227ENST00000470563 DMRTB1Q96MA1 342 aa8.99□□□□□ -0.97
RBM39-227ENST00000470563 FAM129BQ96TA1 746 aa8.99□□□□□ -0.97
RBM39-227ENST00000470563 SAP130Q9H0E3 1048 aa8.99□□□□□ -0.97
RBM39-227ENST00000470563 ANO2Q9NQ90 1003 aa8.99□□□□□ -0.97
RBM39-227ENST00000470563 RAB6BQ9NRW1 208 aa8.99□□□□□ -0.97
RBM39-227ENST00000470563 USP3Q9Y6I4 520 aa8.99□□□□□ -0.97
RBM39-227ENST00000470563 IGHA2P01877 340 aa8.98□□□□□ -0.97
RBM39-227ENST00000470563 BRD2P25440 801 aaKnown RBP8.98□□□□□ -0.97
RBM39-227ENST00000470563 RNF144AP50876 292 aaPredicted RBP8.98□□□□□ -0.97
RBM39-227ENST00000470563 MTMR3Q13615 1198 aa8.98□□□□□ -0.97
RBM39-227ENST00000470563 NAA30Q147X3 362 aaPredicted RBP8.98□□□□□ -0.97
RBM39-227ENST00000470563 NIFKQ9BYG3 293 aaKnown RBP8.98□□□□□ -0.97
RBM39-227ENST00000470563 PRKD2Q9BZL6 878 aa8.98□□□□□ -0.97
RBM39-227ENST00000470563 GRIP2Q9C0E4 1043 aa8.98□□□□□ -0.97
RBM39-227ENST00000470563 NISCHQ9Y2I1 1504 aa8.97□□□□□ -0.97
RBM39-227ENST00000470563 SPATA31C2B4DYI2 1134 aa8.97□□□□□ -0.97
RBM39-227ENST00000470563 TREHO43280 583 aa8.97□□□□□ -0.97
RBM39-227ENST00000470563 FZD6O60353 706 aa8.97□□□□□ -0.97
RBM39-227ENST00000470563 SMPD1P17405 629 aa8.97□□□□□ -0.97
RBM39-227ENST00000470563 WDR4P57081 412 aaKnown RBP8.97□□□□□ -0.97
RBM39-227ENST00000470563 FMR1Q06787 632 aaKnown RBP eCLIP8.97□□□□□ -0.976e-13■□□□□ 10.3
RBM39-227ENST00000470563 CBLBQ13191 982 aa8.97□□□□□ -0.97
RBM39-227ENST00000470563 HIF1AQ16665 826 aa8.97□□□□□ -0.97
RBM39-227ENST00000470563 WDR44Q5JSH3 913 aa8.97□□□□□ -0.97
RBM39-227ENST00000470563 PLA2G2EQ9NZK7 142 aa8.97□□□□□ -0.97
RBM39-227ENST00000470563 LRFN2Q9ULH4 789 aa8.97□□□□□ -0.97
RBM39-227ENST00000470563 RGS20O76081 388 aa8.96□□□□□ -0.98
RBM39-227ENST00000470563 EIF1AXP47813 144 aaKnown RBP8.96□□□□□ -0.98
RBM39-227ENST00000470563 DSC3Q14574 896 aa8.96□□□□□ -0.98
RBM39-227ENST00000470563 C11orf91Q3C1V1 193 aa8.96□□□□□ -0.98
RBM39-227ENST00000470563 CYP4X1Q8N118 509 aa8.96□□□□□ -0.98
RBM39-227ENST00000470563 NLRP3Q96P20 1036 aa8.96□□□□□ -0.98
RBM39-227ENST00000470563 ZSCAN10Q96SZ4 725 aaPredicted RBP8.96□□□□□ -0.98
RBM39-227ENST00000470563 TSEN34Q9BSV6 310 aaKnown RBP8.96□□□□□ -0.98
RBM39-227ENST00000470563 ZDHHC3Q9NYG2 299 aa8.96□□□□□ -0.98
RBM39-227ENST00000470563 KIAA1522Q9P206 1035 aaPredicted RBP8.96□□□□□ -0.98
RBM39-227ENST00000470563 SPINT1O43278 529 aa8.95□□□□□ -0.98
RBM39-227ENST00000470563 USP5P45974 858 aa8.95□□□□□ -0.98
RBM39-227ENST00000470563 PDE3BQ13370 1112 aa8.95□□□□□ -0.98
RBM39-227ENST00000470563 TMC7Q7Z402 723 aa8.95□□□□□ -0.98
RBM39-227ENST00000470563 ALDH16A1Q8IZ83 802 aa8.95□□□□□ -0.98
RBM39-227ENST00000470563 CHMP7Q8WUX9 453 aaPredicted RBP8.95□□□□□ -0.98
RBM39-227ENST00000470563 L3MBTL2Q969R5 705 aa8.95□□□□□ -0.98
RBM39-227ENST00000470563 ZFAND3Q9H8U3 227 aa8.95□□□□□ -0.98
RBM39-227ENST00000470563 BRPF3Q9ULD4 1205 aa8.95□□□□□ -0.98
RBM39-227ENST00000470563 TTC24A2A3L6 582 aaPredicted RBP8.94□□□□□ -0.98
RBM39-227ENST00000470563 J3QL48 77 aa8.94□□□□□ -0.98
RBM39-227ENST00000470563 FOXC1Q12948 553 aa8.94□□□□□ -0.98
RBM39-227ENST00000470563 IER5Q5VY09 327 aa8.94□□□□□ -0.98
RBM39-227ENST00000470563 TRIM67Q6ZTA4 783 aa8.94□□□□□ -0.98
RBM39-227ENST00000470563 GJD3Q8N144 294 aa8.94□□□□□ -0.98
RBM39-227ENST00000470563 GIPC2Q8TF65 315 aa8.94□□□□□ -0.98
RBM39-227ENST00000470563 MRRFQ96E11 262 aaKnown RBP8.94□□□□□ -0.98
RBM39-227ENST00000470563 TBCELQ5QJ74 424 aa8.93□□□□□ -0.98
RBM39-227ENST00000470563 C7orf43Q8WVR3 580 aa8.93□□□□□ -0.98
RBM39-227ENST00000470563 BCL11AQ9H165 835 aa8.93□□□□□ -0.98
RBM39-227ENST00000470563 MZF1P28698 734 aaPredicted RBP8.92□□□□□ -0.98
RBM39-227ENST00000470563 GTF2E1P29083 439 aaPredicted RBP8.92□□□□□ -0.98
RBM39-227ENST00000470563 ITGAEP38570 1179 aa8.92□□□□□ -0.98
RBM39-227ENST00000470563 CABP1Q9NZU7 370 aa8.92□□□□□ -0.98
RBM39-227ENST00000470563 RPLP1P05386 114 aaKnown RBP8.91□□□□□ -0.98
RBM39-227ENST00000470563 EAPPQ56P03 285 aaPredicted RBP8.91□□□□□ -0.98
RBM39-227ENST00000470563 GNASQ5JWF2 1037 aa8.91□□□□□ -0.98
RBM39-227ENST00000470563 PHACTR1Q9C0D0 580 aa8.91□□□□□ -0.98
RBM39-227ENST00000470563 FAM13BQ9NYF5 915 aa8.91□□□□□ -0.98
RBM39-227ENST00000470563 MEN1O00255 615 aa8.9□□□□□ -0.98
RBM39-227ENST00000470563 AGBL1Q96MI9 1066 aa8.9□□□□□ -0.98
RBM39-227ENST00000470563 RELBQ01201 579 aa8.89□□□□□ -0.99
RBM39-227ENST00000470563 EHHADHQ08426 723 aa8.89□□□□□ -0.99
RBM39-227ENST00000470563 SH3PXD2AQ5TCZ1 1133 aa8.89□□□□□ -0.99
RBM39-227ENST00000470563 TMEM214Q6NUQ4 689 aaKnown RBP8.89□□□□□ -0.99
RBM39-227ENST00000470563 ETFBKMTQ8IXQ9 262 aa8.89□□□□□ -0.99
RBM39-227ENST00000470563 C11orf16Q9NQ32 467 aa8.89□□□□□ -0.99
RBM39-227ENST00000470563 ZNF232Q9UNY5 417 aa8.89□□□□□ -0.99
RBM39-227ENST00000470563 TGFBR3LH3BV60 316 aa8.88□□□□□ -0.99
RBM39-227ENST00000470563 AVPP01185 164 aa8.88□□□□□ -0.99
RBM39-227ENST00000470563 P4HBP07237 508 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms