RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 USP3Q9Y6I4 520 aa10.38□□□□□ -0.75
ATG3-204ENST00000467275 BNIP3LO60238 219 aa10.37□□□□□ -0.75
ATG3-204ENST00000467275 BMP4P12644 408 aa10.37□□□□□ -0.75
ATG3-204ENST00000467275 FGFR3P22607 806 aa10.37□□□□□ -0.75
ATG3-204ENST00000467275 NLRP8Q86W28 1048 aa10.37□□□□□ -0.75
ATG3-204ENST00000467275 ZNF295-AS1Q8N0V1 137 aa10.37□□□□□ -0.75
ATG3-204ENST00000467275 KLRG1Q96E93 195 aa10.37□□□□□ -0.75
ATG3-204ENST00000467275 ZCCHC2Q9C0B9 1178 aaKnown RBP10.37□□□□□ -0.75
ATG3-204ENST00000467275 LRRC4BQ9NT99 713 aa10.37□□□□□ -0.75
ATG3-204ENST00000467275 SCHIP1Q9P0W5 487 aaPredicted RBP10.37□□□□□ -0.75
ATG3-204ENST00000467275 PARP3Q9Y6F1 533 aa10.37□□□□□ -0.75
ATG3-204ENST00000467275 OIP5O43482 229 aa10.36□□□□□ -0.75
ATG3-204ENST00000467275 KCTD17Q8N5Z5 321 aa10.36□□□□□ -0.75
ATG3-204ENST00000467275 TPCN2Q8NHX9 752 aa10.36□□□□□ -0.75
ATG3-204ENST00000467275 ZDHHC3Q9NYG2 299 aa10.36□□□□□ -0.75
ATG3-204ENST00000467275 PCDHGC4Q9Y5F7 938 aa10.36□□□□□ -0.75
ATG3-204ENST00000467275 A0A1W2PNR3 127 aa10.35□□□□□ -0.75
ATG3-204ENST00000467275 KANK3Q6NY19 840 aa10.35□□□□□ -0.75
ATG3-204ENST00000467275 PODNQ7Z5L7 613 aa10.35□□□□□ -0.75
ATG3-204ENST00000467275 NDFIP2Q9NV92 336 aa10.35□□□□□ -0.75
ATG3-204ENST00000467275 GJA3Q9Y6H8 435 aa10.35□□□□□ -0.75
ATG3-204ENST00000467275 ATXN7O15265 892 aaPredicted RBP10.34□□□□□ -0.75
ATG3-204ENST00000467275 CTBSQ01459 385 aa10.34□□□□□ -0.75
ATG3-204ENST00000467275 CCDC102BQ68D86 513 aa10.34□□□□□ -0.75
ATG3-204ENST00000467275 BICDL1Q6ZP65 573 aa10.34□□□□□ -0.75
ATG3-204ENST00000467275 TNS4Q8IZW8 715 aa10.34□□□□□ -0.75
ATG3-204ENST00000467275 FNBP4Q8N3X1 1017 aaPredicted RBP10.34□□□□□ -0.75
ATG3-204ENST00000467275 GLMNQ92990 594 aa10.34□□□□□ -0.75
ATG3-204ENST00000467275 DNAAF2Q9NVR5 837 aaKnown RBP10.34□□□□□ -0.75
ATG3-204ENST00000467275 MKRN1Q9UHC7 482 aaKnown RBP10.34□□□□□ -0.75
ATG3-204ENST00000467275 GDF2Q9UK05 429 aaPredicted RBP10.34□□□□□ -0.75
ATG3-204ENST00000467275 PHF20L1A8MW92 1017 aa10.33□□□□□ -0.76
ATG3-204ENST00000467275 ZBTB7BO15156 539 aaPredicted RBP10.33□□□□□ -0.76
ATG3-204ENST00000467275 CLDN10P78369 228 aa10.33□□□□□ -0.76
ATG3-204ENST00000467275 OGFOD1Q8N543 542 aa10.33□□□□□ -0.76
ATG3-204ENST00000467275 BEND7Q8N7W2 519 aaPredicted RBP10.33□□□□□ -0.76
ATG3-204ENST00000467275 GALNT6Q8NCL4 622 aa10.33□□□□□ -0.76
ATG3-204ENST00000467275 L3MBTL2Q969R5 705 aa10.33□□□□□ -0.76
ATG3-204ENST00000467275 KIAA1024Q9UPX6 916 aa10.33□□□□□ -0.76
ATG3-204ENST00000467275 CNTNAP5Q8WYK1 1306 aa10.33□□□□□ -0.76
ATG3-204ENST00000467275 C2CD2LO14523 706 aa10.32□□□□□ -0.76
ATG3-204ENST00000467275 TBCELQ5QJ74 424 aa10.32□□□□□ -0.76
ATG3-204ENST00000467275 SLC9A9Q8IVB4 645 aa10.32□□□□□ -0.76
ATG3-204ENST00000467275 GOLGA6L1Q8N7Z2 621 aa10.32□□□□□ -0.76
ATG3-204ENST00000467275 ZIC5Q96T25 663 aa10.32□□□□□ -0.76
ATG3-204ENST00000467275 ZNF232Q9UNY5 417 aa10.32□□□□□ -0.76
ATG3-204ENST00000467275 RBM19Q9Y4C8 960 aaKnown RBP10.32□□□□□ -0.76
ATG3-204ENST00000467275 DCDC2BA2VCK2 349 aa10.31□□□□□ -0.76
ATG3-204ENST00000467275 PALM3A6NDB9 673 aaPredicted RBP10.31□□□□□ -0.76
ATG3-204ENST00000467275 EPHA4P54764 986 aa10.31□□□□□ -0.76
ATG3-204ENST00000467275 FOXK2Q01167 660 aa10.31□□□□□ -0.76
ATG3-204ENST00000467275 TEAD4Q15561 434 aa10.31□□□□□ -0.76
ATG3-204ENST00000467275 LARGE2Q8N3Y3 721 aa10.31□□□□□ -0.76
ATG3-204ENST00000467275 KHNYNO15037 678 aaKnown RBP10.3□□□□□ -0.76
ATG3-204ENST00000467275 NOS2P35228 1153 aa10.3□□□□□ -0.76
ATG3-204ENST00000467275 TXLNAP40222 546 aa10.3□□□□□ -0.76
ATG3-204ENST00000467275 ZDHHC1Q8WTX9 485 aa10.3□□□□□ -0.76
ATG3-204ENST00000467275 EDARADDQ8WWZ3 215 aa10.3□□□□□ -0.76
ATG3-204ENST00000467275 TFIP11Q9UBB9 837 aaKnown RBP10.3□□□□□ -0.76
ATG3-204ENST00000467275 MAPTP10636 758 aaKnown RBP10.29□□□□□ -0.76
ATG3-204ENST00000467275 ZNF594Q96JF6 807 aaPredicted RBP10.29□□□□□ -0.76
ATG3-204ENST00000467275 CALR3Q96L12 384 aaKnown RBP10.29□□□□□ -0.76
ATG3-204ENST00000467275 GGA1Q9UJY5 639 aa10.29□□□□□ -0.76
ATG3-204ENST00000467275 DNMT3AQ9Y6K1 912 aaPredicted RBP10.29□□□□□ -0.76
ATG3-204ENST00000467275 SERTM1A2A2V5 107 aa10.28□□□□□ -0.76
ATG3-204ENST00000467275 A6NJR5 290 aa10.28□□□□□ -0.76
ATG3-204ENST00000467275 SHISA8B8ZZ34 492 aa10.28□□□□□ -0.76
ATG3-204ENST00000467275 TNP2Q05952 138 aa10.28□□□□□ -0.76
ATG3-204ENST00000467275 C1orf229Q6ZS94 237 aaPredicted RBP10.28□□□□□ -0.76
ATG3-204ENST00000467275 RRAGCQ9HB90 399 aa10.28□□□□□ -0.76
ATG3-204ENST00000467275 NEUROD4Q9HD90 331 aa10.28□□□□□ -0.76
ATG3-204ENST00000467275 CHMP3Q9Y3E7 222 aa10.28□□□□□ -0.76
ATG3-204ENST00000467275 CD33P20138 364 aa10.27□□□□□ -0.77
ATG3-204ENST00000467275 RASA1P20936 1047 aa10.27□□□□□ -0.77
ATG3-204ENST00000467275 FAM157BP0CG42 384 aa10.26□□□□□ -0.77
ATG3-204ENST00000467275 ARAFP10398 606 aa10.26□□□□□ -0.77
ATG3-204ENST00000467275 AMPD1P23109 780 aa10.26□□□□□ -0.77
ATG3-204ENST00000467275 SLCO4C1Q6ZQN7 724 aa10.26□□□□□ -0.77
ATG3-204ENST00000467275 SIX5Q8N196 739 aa10.26□□□□□ -0.77
ATG3-204ENST00000467275 TSPAN10Q9H1Z9 355 aaPredicted RBP10.26□□□□□ -0.77
ATG3-204ENST00000467275 MAFBQ9Y5Q3 323 aaPredicted RBP10.26□□□□□ -0.77
ATG3-204ENST00000467275 SFI1A8K8P3 1242 aa10.25□□□□□ -0.77
ATG3-204ENST00000467275 NEURL1BA8MQ27 555 aa10.25□□□□□ -0.77
ATG3-204ENST00000467275 M0R2N6 131 aa10.25□□□□□ -0.77
ATG3-204ENST00000467275 EML1O00423 815 aa10.25□□□□□ -0.77
ATG3-204ENST00000467275 PSMA6P60900 246 aaKnown RBP10.25□□□□□ -0.77
ATG3-204ENST00000467275 FAM182BQ5T319 152 aa10.25□□□□□ -0.77
ATG3-204ENST00000467275 SAMD5Q5TGI4 173 aa10.25□□□□□ -0.77
ATG3-204ENST00000467275 LRRC69Q6ZNQ3 347 aa10.25□□□□□ -0.77
ATG3-204ENST00000467275 SNRPNP63162 240 aaKnown RBP10.24□□□□□ -0.77
ATG3-204ENST00000467275 SH3PXD2AQ5TCZ1 1133 aa10.24□□□□□ -0.77
ATG3-204ENST00000467275 TSEN2Q8NCE0 465 aaKnown RBP10.24□□□□□ -0.77
ATG3-204ENST00000467275 RHPN1Q8TCX5 695 aa10.24□□□□□ -0.77
ATG3-204ENST00000467275 MARK1Q9P0L2 795 aa10.24□□□□□ -0.77
ATG3-204ENST00000467275 MKL2Q9ULH7 1088 aa10.24□□□□□ -0.77
ATG3-204ENST00000467275 PRR12Q9ULL5 1215 aa10.24□□□□□ -0.77
ATG3-204ENST00000467275 GPAT2Q6NUI2 795 aa10.23□□□□□ -0.77
ATG3-204ENST00000467275 LARP1Q6PKG0 1096 aaKnown RBP10.23□□□□□ -0.77
ATG3-204ENST00000467275 PPP1R12CQ9BZL4 782 aa10.23□□□□□ -0.77
ATG3-204ENST00000467275 GPC6Q9Y625 555 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms