RNA–Protein interactions for RNA: ENST00000467134.5

MUC1-216, Transcript of mucin 1, cell surface associated, human

TSL 1 (best)

Gene MUC1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-216	ENST00000467134	ONECUT3	O60422	494 aa	Predicted RBP	13.95	□□□□□ -0.18
MUC1-216	ENST00000467134	MEX3C	Q5U5Q3	659 aa	Known RBP	13.95	□□□□□ -0.18
MUC1-216	ENST00000467134	SBF2	Q86WG5	1849 aa		13.94	□□□□□ -0.18
MUC1-216	ENST00000467134	AFF2	P51816	1311 aa		13.94	□□□□□ -0.18
MUC1-216	ENST00000467134	ITPRIP	Q8IWB1	547 aa		13.94	□□□□□ -0.18
MUC1-216	ENST00000467134	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.94	□□□□□ -0.18
MUC1-216	ENST00000467134	TRPC5	Q9UL62	973 aa	Predicted RBP	13.94	□□□□□ -0.18
MUC1-216	ENST00000467134	CCDC9	Q9Y3X0	531 aa	Known RBP	13.94	□□□□□ -0.18
MUC1-216	ENST00000467134	ARFGEF2	Q9Y6D5	1785 aa		13.94	□□□□□ -0.18
MUC1-216	ENST00000467134	NUP188	Q5SRE5	1749 aa		13.93	□□□□□ -0.18
MUC1-216	ENST00000467134	TCERG1	O14776	1098 aa	Known RBP	13.93	□□□□□ -0.18
MUC1-216	ENST00000467134	ZBTB7B	O15156	539 aa	Predicted RBP	13.93	□□□□□ -0.18
MUC1-216	ENST00000467134	SLC39A6	Q13433	755 aa		13.93	□□□□□ -0.18
MUC1-216	ENST00000467134	HDAC1	Q13547	482 aa	Predicted RBP	13.92	□□□□□ -0.18
MUC1-216	ENST00000467134	G2E3	Q7L622	706 aa		13.92	□□□□□ -0.18
MUC1-216	ENST00000467134	GJD4	Q96KN9	370 aa	Predicted RBP	13.92	□□□□□ -0.18
MUC1-216	ENST00000467134	CHPF2	Q9P2E5	772 aa		13.92	□□□□□ -0.18
MUC1-216	ENST00000467134	COL5A3	P25940	1745 aa	Predicted RBP	13.91	□□□□□ -0.18
MUC1-216	ENST00000467134	FKBP5	Q13451	457 aa	Predicted RBP	13.91	□□□□□ -0.18
MUC1-216	ENST00000467134	MARCH10	Q8NA82	808 aa	Predicted RBP	13.91	□□□□□ -0.18
MUC1-216	ENST00000467134	PIGB	Q92521	554 aa		13.91	□□□□□ -0.18
MUC1-216	ENST00000467134	DDX58	O95786	925 aa	Known RBP	13.9	□□□□□ -0.18
MUC1-216	ENST00000467134	EIF2S2	P20042	333 aa	Known RBP	13.9	□□□□□ -0.18
MUC1-216	ENST00000467134	PDIA6	Q15084	440 aa		13.9	□□□□□ -0.18
MUC1-216	ENST00000467134	ATG3	Q9NT62	314 aa		13.9	□□□□□ -0.18
MUC1-216	ENST00000467134	BTAF1	O14981	1849 aa		13.9	□□□□□ -0.18
MUC1-216	ENST00000467134	LY75	O60449	1722 aa		13.9	□□□□□ -0.18
MUC1-216	ENST00000467134	ADCY9	O60503	1353 aa		13.89	□□□□□ -0.19
MUC1-216	ENST00000467134	FAM98C	Q17RN3	349 aa	Known RBP	13.89	□□□□□ -0.19
MUC1-216	ENST00000467134	LRP10	Q7Z4F1	713 aa		13.89	□□□□□ -0.19
MUC1-216	ENST00000467134	RWDD1	Q9H446	243 aa	Predicted RBP	13.89	□□□□□ -0.19
MUC1-216	ENST00000467134	ALDH1L1	O75891	902 aa		13.88	□□□□□ -0.19
MUC1-216	ENST00000467134	KSR2	Q6VAB6	950 aa		13.88	□□□□□ -0.19
MUC1-216	ENST00000467134	SMARCC1	Q92922	1105 aa	Predicted RBP	13.88	□□□□□ -0.19
MUC1-216	ENST00000467134	PCDHB15	Q9Y5E8	787 aa		13.88	□□□□□ -0.19
MUC1-216	ENST00000467134	ANKRD36C	Q5JPF3	1778 aa		13.88	□□□□□ -0.19
MUC1-216	ENST00000467134	AFDN	P55196	1824 aa	Known RBP	13.87	□□□□□ -0.19
MUC1-216	ENST00000467134	BRWD3	Q6RI45	1802 aa		13.87	□□□□□ -0.19
MUC1-216	ENST00000467134	GNAI3	P08754	354 aa		13.87	□□□□□ -0.19
MUC1-216	ENST00000467134	DNAAF4	Q8WXU2	420 aa		13.87	□□□□□ -0.19
MUC1-216	ENST00000467134	NECTIN2	Q92692	538 aa		13.87	□□□□□ -0.19
MUC1-216	ENST00000467134	PHAX	Q9H814	394 aa	Known RBP	13.87	□□□□□ -0.19
MUC1-216	ENST00000467134	HDAC5	Q9UQL6	1122 aa		13.87	□□□□□ -0.19
MUC1-216	ENST00000467134	KAT6B	Q8WYB5	2073 aa		13.86	□□□□□ -0.19
MUC1-216	ENST00000467134	PRAMEF22	A3QJZ6	481 aa		13.86	□□□□□ -0.19
MUC1-216	ENST00000467134	STARD3NL	O95772	234 aa		13.86	□□□□□ -0.19
MUC1-216	ENST00000467134	PRIM1	P49642	420 aa	Known RBP	13.86	□□□□□ -0.19
MUC1-216	ENST00000467134	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.86	□□□□□ -0.19
MUC1-216	ENST00000467134	USP16	Q9Y5T5	823 aa		13.86	□□□□□ -0.19
MUC1-216	ENST00000467134	PROSER3	Q2NL68	480 aa		13.85	□□□□□ -0.19
MUC1-216	ENST00000467134	ZNF772	Q68DY9	489 aa	Predicted RBP	13.85	□□□□□ -0.19
MUC1-216	ENST00000467134	FBXO41	Q8TF61	875 aa		13.85	□□□□□ -0.19
MUC1-216	ENST00000467134	SRCIN1	Q9C0H9	1055 aa		13.85	□□□□□ -0.19
MUC1-216	ENST00000467134	ASAP1	Q9ULH1	1129 aa		13.85	□□□□□ -0.19
MUC1-216	ENST00000467134	PI4KAP2	A4QPH2	592 aa		13.84	□□□□□ -0.19
MUC1-216	ENST00000467134		F6X3S4	739 aa		13.84	□□□□□ -0.19
MUC1-216	ENST00000467134	BEND3	Q5T5X7	828 aa		13.84	□□□□□ -0.19
MUC1-216	ENST00000467134	SMC5	Q8IY18	1101 aa		13.84	□□□□□ -0.19
MUC1-216	ENST00000467134	PI4KAP1	Q8N8J0	262 aa		13.84	□□□□□ -0.19
MUC1-216	ENST00000467134	LINS1	Q8NG48	757 aa		13.84	□□□□□ -0.19
MUC1-216	ENST00000467134	COL15A1	P39059	1388 aa		13.83	□□□□□ -0.19
MUC1-216	ENST00000467134	TAF1L	Q8IZX4	1826 aa		13.83	□□□□□ -0.2
MUC1-216	ENST00000467134	ANKRD44	Q8N8A2	993 aa		13.83	□□□□□ -0.2
MUC1-216	ENST00000467134	PLBD2	Q8NHP8	589 aa		13.83	□□□□□ -0.2
MUC1-216	ENST00000467134	UTY	O14607	1347 aa		13.83	□□□□□ -0.2
MUC1-216	ENST00000467134	PALLD	Q8WX93	1383 aa		13.83	□□□□□ -0.2
MUC1-216	ENST00000467134	NBPF26	B4DH59	902 aa		13.82	□□□□□ -0.2
MUC1-216	ENST00000467134	PTCD1	O75127	700 aa	Known RBP	13.82	□□□□□ -0.2
MUC1-216	ENST00000467134	IGHD	P01880	384 aa		13.82	□□□□□ -0.2
MUC1-216	ENST00000467134	NBPF14	Q5TI25	921 aa		13.82	□□□□□ -0.2
MUC1-216	ENST00000467134	NBPF10	Q6P3W6	841 aa	Known RBP	13.82	□□□□□ -0.2
MUC1-216	ENST00000467134	SLC4A10	Q6U841	1118 aa		13.82	□□□□□ -0.2
MUC1-216	ENST00000467134	NBPF15	Q8N660	670 aa		13.82	□□□□□ -0.2
MUC1-216	ENST00000467134	GCC1	Q96CN9	775 aa		13.82	□□□□□ -0.2
MUC1-216	ENST00000467134	MEIS3	Q99687	375 aa		13.82	□□□□□ -0.2
MUC1-216	ENST00000467134	QTRT2	Q9H974	415 aa	Known RBP	13.82	□□□□□ -0.2
MUC1-216	ENST00000467134	MAP3K2	Q9Y2U5	619 aa		13.82	□□□□□ -0.2
MUC1-216	ENST00000467134	BCOR	Q6W2J9	1755 aa		13.81	□□□□□ -0.2
MUC1-216	ENST00000467134	GNAI2	P04899	355 aa		13.81	□□□□□ -0.2
MUC1-216	ENST00000467134	CYP19A1	P11511	503 aa	Predicted RBP	13.81	□□□□□ -0.2
MUC1-216	ENST00000467134	NEXN	Q0ZGT2	675 aa		13.81	□□□□□ -0.2
MUC1-216	ENST00000467134	ANKRD13D	Q6ZTN6	518 aa		13.81	□□□□□ -0.2
MUC1-216	ENST00000467134	COPS6	Q7L5N1	327 aa		13.81	□□□□□ -0.2
MUC1-216	ENST00000467134	XAGE3	Q8WTP9	111 aa		13.81	□□□□□ -0.2
MUC1-216	ENST00000467134	METTL22	Q9BUU2	404 aa	Predicted RBP	13.81	□□□□□ -0.2
MUC1-216	ENST00000467134	USP44	Q9H0E7	712 aa		13.81	□□□□□ -0.2
MUC1-216	ENST00000467134	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.81	□□□□□ -0.2
MUC1-216	ENST00000467134	RGPD4	Q7Z3J3	1758 aa		13.81	□□□□□ -0.2
MUC1-216	ENST00000467134	RGL2	O15211	777 aa		13.8	□□□□□ -0.2
MUC1-216	ENST00000467134	HMMR	O75330	724 aa		13.8	□□□□□ -0.2
MUC1-216	ENST00000467134	ANXA1	P04083	346 aa		13.8	□□□□□ -0.2
MUC1-216	ENST00000467134	RBM6	P78332	1123 aa	Known RBP	13.8	□□□□□ -0.2
MUC1-216	ENST00000467134	DNAJC10	Q8IXB1	793 aa		13.8	□□□□□ -0.2
MUC1-216	ENST00000467134	SEPT12	Q8IYM1	358 aa		13.8	□□□□□ -0.2
MUC1-216	ENST00000467134	SYTL4	Q96C24	671 aa	Predicted RBP	13.8	□□□□□ -0.2
MUC1-216	ENST00000467134	NUP98	P52948	1817 aa		13.8	□□□□□ -0.2
MUC1-216	ENST00000467134	LOC102724428	A0A0B4J2F2	783 aa		13.79	□□□□□ -0.2
MUC1-216	ENST00000467134	UBTFL1	P0CB47	393 aa	Predicted RBP	13.79	□□□□□ -0.2
MUC1-216	ENST00000467134	HMGB2	P26583	209 aa	Known RBP	13.79	□□□□□ -0.2
MUC1-216	ENST00000467134	IL6ST	P40189	918 aa	Predicted RBP	13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms