RNA–Protein interactions for RNA: ENST00000467081.1

CCNL1-209, Transcript of cyclin L1, humanhuman

TSL 3

Gene CCNL1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-209ENST00000467081 SUPT5HO00267 1087 aaKnown RBP11.26□□□□□ -0.61
CCNL1-209ENST00000467081 MSX1P28360 303 aa11.26□□□□□ -0.61
CCNL1-209ENST00000467081 DBN1Q16643 649 aa11.26□□□□□ -0.61
CCNL1-209ENST00000467081 TRIM22Q8IYM9 498 aa11.26□□□□□ -0.61
CCNL1-209ENST00000467081 HINFPQ9BQA5 517 aa11.26□□□□□ -0.61
CCNL1-209ENST00000467081 TSPAN10Q9H1Z9 355 aaPredicted RBP11.26□□□□□ -0.61
CCNL1-209ENST00000467081 LGR5O75473 907 aa11.25□□□□□ -0.61
CCNL1-209ENST00000467081 ZNF837Q96EG3 531 aaPredicted RBP11.25□□□□□ -0.61
CCNL1-209ENST00000467081 ARXQ96QS3 562 aa11.25□□□□□ -0.61
CCNL1-209ENST00000467081 RUBCNLQ9H714 662 aa11.25□□□□□ -0.61
CCNL1-209ENST00000467081 H7C1W4 665 aa11.24□□□□□ -0.61
CCNL1-209ENST00000467081 SRPK2P78362 688 aaKnown RBP11.24□□□□□ -0.61
CCNL1-209ENST00000467081 NOVA2Q9UNW9 492 aaKnown RBP11.24□□□□□ -0.61
CCNL1-209ENST00000467081 CSB-PGBD3P0DP91 1061 aa11.23□□□□□ -0.61
CCNL1-209ENST00000467081 PGBD3Q8N328 593 aa11.23□□□□□ -0.61
CCNL1-209ENST00000467081 FAM200AQ8TCP9 573 aa11.23□□□□□ -0.61
CCNL1-209ENST00000467081 ZDHHC1Q8WTX9 485 aa11.23□□□□□ -0.61
CCNL1-209ENST00000467081 NUCKS1Q9H1E3 243 aaKnown RBP11.23□□□□□ -0.61
CCNL1-209ENST00000467081 ZNF232Q9UNY5 417 aa11.23□□□□□ -0.61
CCNL1-209ENST00000467081 TEAD4Q15561 434 aa11.22□□□□□ -0.61
CCNL1-209ENST00000467081 NBPF1Q3BBV0 1214 aa11.22□□□□□ -0.61
CCNL1-209ENST00000467081 L3MBTL2Q969R5 705 aa11.22□□□□□ -0.61
CCNL1-209ENST00000467081 PBXIP1Q96AQ6 731 aa11.22□□□□□ -0.61
CCNL1-209ENST00000467081 GMCL1Q96IK5 515 aa11.22□□□□□ -0.61
CCNL1-209ENST00000467081 NOS2P35228 1153 aa11.21□□□□□ -0.61
CCNL1-209ENST00000467081 GTPBP3Q969Y2 492 aaKnown RBP11.21□□□□□ -0.61
CCNL1-209ENST00000467081 SERTM1A2A2V5 107 aa11.2□□□□□ -0.62
CCNL1-209ENST00000467081 GPR25O00155 361 aa11.2□□□□□ -0.62
CCNL1-209ENST00000467081 WIPF1O43516 503 aa11.2□□□□□ -0.62
CCNL1-209ENST00000467081 ATP4AP20648 1035 aa11.2□□□□□ -0.62
CCNL1-209ENST00000467081 TXLNAP40222 546 aa11.2□□□□□ -0.62
CCNL1-209ENST00000467081 SH3PXD2AQ5TCZ1 1133 aa11.2□□□□□ -0.62
CCNL1-209ENST00000467081 SCG3Q8WXD2 468 aaKnown RBP11.2□□□□□ -0.62
CCNL1-209ENST00000467081 COL25A1Q9BXS0 654 aaPredicted RBP11.2□□□□□ -0.62
CCNL1-209ENST00000467081 ATAD2Q6PL18 1390 aa11.19□□□□□ -0.62
CCNL1-209ENST00000467081 C21orf2O43822 256 aa11.19□□□□□ -0.62
CCNL1-209ENST00000467081 PPP1R12BO60237 982 aaPredicted RBP11.19□□□□□ -0.62
CCNL1-209ENST00000467081 TATP17735 454 aaPredicted RBP11.19□□□□□ -0.62
CCNL1-209ENST00000467081 PSMA6P60900 246 aaKnown RBP11.19□□□□□ -0.62
CCNL1-209ENST00000467081 FOXR1Q6PIV2 292 aa11.19□□□□□ -0.62
CCNL1-209ENST00000467081 C1orf216Q8TAB5 229 aa11.19□□□□□ -0.62
CCNL1-209ENST00000467081 ZDHHC3Q9NYG2 299 aa11.19□□□□□ -0.62
CCNL1-209ENST00000467081 ZMIZ1Q9ULJ6 1067 aa11.19□□□□□ -0.62
CCNL1-209ENST00000467081 CHMP3Q9Y3E7 222 aa11.19□□□□□ -0.62
CCNL1-209ENST00000467081 ATG7O95352 703 aa11.18□□□□□ -0.62
CCNL1-209ENST00000467081 THBS1P07996 1170 aa11.18□□□□□ -0.62
CCNL1-209ENST00000467081 ARSJQ5FYB0 599 aaPredicted RBP11.18□□□□□ -0.62
CCNL1-209ENST00000467081 GAS2L2Q8NHY3 880 aa11.18□□□□□ -0.62
CCNL1-209ENST00000467081 CHMP7Q8WUX9 453 aaPredicted RBP11.18□□□□□ -0.62
CCNL1-209ENST00000467081 EML1O00423 815 aa11.17□□□□□ -0.62
CCNL1-209ENST00000467081 KRT76Q01546 638 aa11.17□□□□□ -0.62
CCNL1-209ENST00000467081 ELOAQ14241 798 aaKnown RBP11.17□□□□□ -0.62
CCNL1-209ENST00000467081 EFHC2Q5JST6 749 aa11.17□□□□□ -0.62
CCNL1-209ENST00000467081 RNFT1Q5M7Z0 435 aa11.17□□□□□ -0.62
CCNL1-209ENST00000467081 STK32AQ8WU08 396 aa11.17□□□□□ -0.62
CCNL1-209ENST00000467081 CNTNAP3BQ96NU0 1288 aa11.17□□□□□ -0.62
CCNL1-209ENST00000467081 CNTNAP3Q9BZ76 1288 aa11.17□□□□□ -0.62
CCNL1-209ENST00000467081 CRISPLD1Q9H336 500 aa11.17□□□□□ -0.62
CCNL1-209ENST00000467081 BICDL1Q6ZP65 573 aa11.16□□□□□ -0.62
CCNL1-209ENST00000467081 ARID3AQ99856 593 aa11.16□□□□□ -0.62
CCNL1-209ENST00000467081 HCN4Q9Y3Q4 1203 aa11.16□□□□□ -0.62
CCNL1-209ENST00000467081 LBRQ14739 615 aaKnown RBP11.15□□□□□ -0.62
CCNL1-209ENST00000467081 TRERF1Q96PN7 1200 aa11.15□□□□□ -0.62
CCNL1-209ENST00000467081 A0A1W2PNR3 127 aa11.14□□□□□ -0.63
CCNL1-209ENST00000467081 ZIC5Q96T25 663 aa11.14□□□□□ -0.63
CCNL1-209ENST00000467081 IGFBP4P22692 258 aa11.13□□□□□ -0.63
CCNL1-209ENST00000467081 GAS6Q14393 721 aa11.13□□□□□ -0.63
CCNL1-209ENST00000467081 C2orf49Q9BVC5 232 aaPredicted RBP11.13□□□□□ -0.63
CCNL1-209ENST00000467081 ACIN1Q9UKV3 1341 aaKnown RBP11.12□□□□□ -0.63
CCNL1-209ENST00000467081 HIRAP54198 1017 aaPredicted RBP11.12□□□□□ -0.63
CCNL1-209ENST00000467081 UBAP2LQ14157 1087 aaKnown RBP11.12□□□□□ -0.63
CCNL1-209ENST00000467081 TMEM164Q5U3C3 297 aa11.12□□□□□ -0.63
CCNL1-209ENST00000467081 PHACTR1Q9C0D0 580 aa11.12□□□□□ -0.63
CCNL1-209ENST00000467081 GJA3Q9Y6H8 435 aa11.12□□□□□ -0.63
CCNL1-209ENST00000467081 WEE1P30291 646 aa11.11□□□□□ -0.63
CCNL1-209ENST00000467081 INSM1Q01101 510 aaPredicted RBP11.11□□□□□ -0.63
CCNL1-209ENST00000467081 POTEAQ6S8J7 498 aa11.11□□□□□ -0.63
CCNL1-209ENST00000467081 NLRP8Q86W28 1048 aa11.11□□□□□ -0.63
CCNL1-209ENST00000467081 STAG2Q8N3U4 1231 aa11.11□□□□□ -0.63
CCNL1-209ENST00000467081 RHPN1Q8TCX5 695 aa11.11□□□□□ -0.63
CCNL1-209ENST00000467081 NGLY1Q96IV0 654 aa11.11□□□□□ -0.63
CCNL1-209ENST00000467081 FAM69CQ0P6D2 419 aa11.1□□□□□ -0.63
CCNL1-209ENST00000467081 SWI5Q1ZZU3 235 aa11.1□□□□□ -0.63
CCNL1-209ENST00000467081 PRIMPOLQ96LW4 560 aa11.1□□□□□ -0.63
CCNL1-209ENST00000467081 ZCCHC2Q9C0B9 1178 aaKnown RBP11.1□□□□□ -0.63
CCNL1-209ENST00000467081 PRMT3O60678 531 aa11.09□□□□□ -0.63
CCNL1-209ENST00000467081 PPP1R15AO75807 674 aaPredicted RBP11.09□□□□□ -0.63
CCNL1-209ENST00000467081 C1orf53Q5VUE5 145 aa11.09□□□□□ -0.63
CCNL1-209ENST00000467081 FIGNL1Q6PIW4 674 aa11.09□□□□□ -0.63
CCNL1-209ENST00000467081 ALDH16A1Q8IZ83 802 aa11.09□□□□□ -0.63
CCNL1-209ENST00000467081 KLRG1Q96E93 195 aa11.09□□□□□ -0.63
CCNL1-209ENST00000467081 ABHD17AQ96GS6 310 aa11.09□□□□□ -0.63
CCNL1-209ENST00000467081 NEUROD4Q9HD90 331 aa11.09□□□□□ -0.63
CCNL1-209ENST00000467081 ATXN7O15265 892 aaPredicted RBP11.08□□□□□ -0.64
CCNL1-209ENST00000467081 BNIP3LO60238 219 aa11.08□□□□□ -0.64
CCNL1-209ENST00000467081 LRRC69Q6ZNQ3 347 aa11.08□□□□□ -0.64
CCNL1-209ENST00000467081 C7orf43Q8WVR3 580 aa11.08□□□□□ -0.64
CCNL1-209ENST00000467081 CFHR5Q9BXR6 569 aa11.08□□□□□ -0.64
CCNL1-209ENST00000467081 MBIPQ9NS73 344 aa11.08□□□□□ -0.64
CCNL1-209ENST00000467081 PHF24Q9UPV7 400 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms