RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 NDFIP2Q9NV92 336 aa11.87□□□□□ -0.51
SSB-207ENST00000465871 DNAAF2Q9NVR5 837 aaKnown RBP11.87□□□□□ -0.51
SSB-207ENST00000465871 MKRN1Q9UHC7 482 aaKnown RBP11.87□□□□□ -0.51
SSB-207ENST00000465871 BCRP11274 1271 aa11.86□□□□□ -0.51
SSB-207ENST00000465871 TATP17735 454 aaPredicted RBP11.86□□□□□ -0.51
SSB-207ENST00000465871 CCDC102BQ68D86 513 aa11.86□□□□□ -0.51
SSB-207ENST00000465871 NLRP8Q86W28 1048 aa11.86□□□□□ -0.51
SSB-207ENST00000465871 LARGE2Q8N3Y3 721 aa11.86□□□□□ -0.51
SSB-207ENST00000465871 ABHD17AQ96GS6 310 aa11.86□□□□□ -0.51
SSB-207ENST00000465871 ENAMQ9NRM1 1142 aa11.86□□□□□ -0.51
SSB-207ENST00000465871 MAFBQ9Y5Q3 323 aaPredicted RBP11.85□□□□□ -0.51
SSB-207ENST00000465871 PALM3A6NDB9 673 aaPredicted RBP11.84□□□□□ -0.51
SSB-207ENST00000465871 BNIP3LO60238 219 aa11.84□□□□□ -0.51
SSB-207ENST00000465871 ARSJQ5FYB0 599 aaPredicted RBP11.84□□□□□ -0.51
SSB-207ENST00000465871 SLC9A9Q8IVB4 645 aa11.84□□□□□ -0.51
SSB-207ENST00000465871 TNS4Q8IZW8 715 aa11.84□□□□□ -0.51
SSB-207ENST00000465871 SIX5Q8N196 739 aa11.84□□□□□ -0.51
SSB-207ENST00000465871 CALR3Q96L12 384 aaKnown RBP11.84□□□□□ -0.51
SSB-207ENST00000465871 LRRC4BQ9NT99 713 aa11.84□□□□□ -0.51
SSB-207ENST00000465871 TFIP11Q9UBB9 837 aaKnown RBP11.84□□□□□ -0.51
SSB-207ENST00000465871 A0A1W2PNR3 127 aa11.83□□□□□ -0.52
SSB-207ENST00000465871 FGFR3P22607 806 aa11.83□□□□□ -0.52
SSB-207ENST00000465871 GSK3AP49840 483 aa11.83□□□□□ -0.52
SSB-207ENST00000465871 MARSP56192 900 aaKnown RBP11.83□□□□□ -0.52
SSB-207ENST00000465871 TEAD4Q15561 434 aa11.83□□□□□ -0.52
SSB-207ENST00000465871 ZDHHC1Q8WTX9 485 aa11.83□□□□□ -0.52
SSB-207ENST00000465871 OXCT2Q9BYC2 517 aaPredicted RBP11.83□□□□□ -0.52
SSB-207ENST00000465871 ZCCHC2Q9C0B9 1178 aaKnown RBP11.83□□□□□ -0.52
SSB-207ENST00000465871 PCDHGC4Q9Y5F7 938 aa11.83□□□□□ -0.52
SSB-207ENST00000465871 PARP3Q9Y6F1 533 aa11.83□□□□□ -0.52
SSB-207ENST00000465871 L3MBTL2Q969R5 705 aa11.82□□□□□ -0.52
SSB-207ENST00000465871 ZNF594Q96JF6 807 aaPredicted RBP11.82□□□□□ -0.52
SSB-207ENST00000465871 M0R2N6 131 aa11.81□□□□□ -0.52
SSB-207ENST00000465871 ATXN7O15265 892 aaPredicted RBP11.8□□□□□ -0.52
SSB-207ENST00000465871 BMP4P12644 408 aa11.8□□□□□ -0.52
SSB-207ENST00000465871 NOS2P35228 1153 aa11.8□□□□□ -0.52
SSB-207ENST00000465871 TXLNAP40222 546 aa11.8□□□□□ -0.52
SSB-207ENST00000465871 TBCELQ5QJ74 424 aa11.8□□□□□ -0.52
SSB-207ENST00000465871 KLRG1Q96E93 195 aa11.8□□□□□ -0.52
SSB-207ENST00000465871 SCARF2Q96GP6 870 aaPredicted RBP11.8□□□□□ -0.52
SSB-207ENST00000465871 ZIC5Q96T25 663 aa11.8□□□□□ -0.52
SSB-207ENST00000465871 PPP1R12CQ9BZL4 782 aa11.8□□□□□ -0.52
SSB-207ENST00000465871 OIP5O43482 229 aa11.79□□□□□ -0.52
SSB-207ENST00000465871 BICDL1Q6ZP65 573 aa11.79□□□□□ -0.52
SSB-207ENST00000465871 RBM19Q9Y4C8 960 aaKnown RBP11.79□□□□□ -0.52
SSB-207ENST00000465871 C2CD2LO14523 706 aa11.78□□□□□ -0.52
SSB-207ENST00000465871 DKK1O94907 266 aa11.78□□□□□ -0.52
SSB-207ENST00000465871 RASA1P20936 1047 aa11.78□□□□□ -0.52
SSB-207ENST00000465871 RASSF7Q02833 373 aa11.78□□□□□ -0.52
SSB-207ENST00000465871 NEDD1Q8NHV4 660 aa11.78□□□□□ -0.52
SSB-207ENST00000465871 TSPAN10Q9H1Z9 355 aaPredicted RBP11.78□□□□□ -0.52
SSB-207ENST00000465871 GDF2Q9UK05 429 aaPredicted RBP11.78□□□□□ -0.52
SSB-207ENST00000465871 ZNF232Q9UNY5 417 aa11.78□□□□□ -0.52
SSB-207ENST00000465871 GJA3Q9Y6H8 435 aa11.78□□□□□ -0.52
SSB-207ENST00000465871 SERTM1A2A2V5 107 aa11.77□□□□□ -0.53
SSB-207ENST00000465871 DCDC2BA2VCK2 349 aa11.77□□□□□ -0.53
SSB-207ENST00000465871 PSMA6P60900 246 aaKnown RBP11.77□□□□□ -0.53
SSB-207ENST00000465871 CTBSQ01459 385 aa11.77□□□□□ -0.53
SSB-207ENST00000465871 SFI1A8K8P3 1242 aa11.76□□□□□ -0.53
SSB-207ENST00000465871 EML1O00423 815 aa11.76□□□□□ -0.53
SSB-207ENST00000465871 FAM157BP0CG42 384 aa11.76□□□□□ -0.53
SSB-207ENST00000465871 SAMD5Q5TGI4 173 aa11.76□□□□□ -0.53
SSB-207ENST00000465871 TMEM151AQ8N4L1 468 aa11.76□□□□□ -0.53
SSB-207ENST00000465871 GOLGA6L1Q8N7Z2 621 aa11.76□□□□□ -0.53
SSB-207ENST00000465871 TSEN2Q8NCE0 465 aaKnown RBP11.76□□□□□ -0.53
SSB-207ENST00000465871 GPC6Q9Y625 555 aaPredicted RBP11.76□□□□□ -0.53
SSB-207ENST00000465871 MAPTP10636 758 aaKnown RBP11.75□□□□□ -0.53
SSB-207ENST00000465871 IRS1P35568 1242 aa11.75□□□□□ -0.53
SSB-207ENST00000465871 TNP2Q05952 138 aa11.75□□□□□ -0.53
SSB-207ENST00000465871 SH3PXD2AQ5TCZ1 1133 aa11.75□□□□□ -0.53
SSB-207ENST00000465871 CHMP3Q9Y3E7 222 aa11.75□□□□□ -0.53
SSB-207ENST00000465871 KHNYNO15037 678 aaKnown RBP11.74□□□□□ -0.53
SSB-207ENST00000465871 GDF11O95390 407 aa11.74□□□□□ -0.53
SSB-207ENST00000465871 HIRAP54198 1017 aaPredicted RBP11.74□□□□□ -0.53
SSB-207ENST00000465871 FAM182BQ5T319 152 aa11.74□□□□□ -0.53
SSB-207ENST00000465871 KANK3Q6NY19 840 aa11.74□□□□□ -0.53
SSB-207ENST00000465871 LARP1Q6PKG0 1096 aaKnown RBP11.74□□□□□ -0.53
SSB-207ENST00000465871 POTEAQ6S8J7 498 aa11.74□□□□□ -0.53
SSB-207ENST00000465871 SLCO4C1Q6ZQN7 724 aa11.74□□□□□ -0.53
SSB-207ENST00000465871 HCN2Q9UL51 889 aa11.74□□□□□ -0.53
SSB-207ENST00000465871 SEC13P55735 322 aa11.73□□□□□ -0.53
SSB-207ENST00000465871 C1orf229Q6ZS94 237 aaPredicted RBP11.73□□□□□ -0.53
SSB-207ENST00000465871 ARAFP10398 606 aa11.72□□□□□ -0.53
SSB-207ENST00000465871 CD33P20138 364 aa11.72□□□□□ -0.53
SSB-207ENST00000465871 CRTC2Q53ET0 693 aaPredicted RBP11.72□□□□□ -0.53
SSB-207ENST00000465871 KANK4Q5T7N3 995 aaPredicted RBP11.72□□□□□ -0.53
SSB-207ENST00000465871 PODNQ7Z5L7 613 aa11.72□□□□□ -0.53
SSB-207ENST00000465871 GALNT6Q8NCL4 622 aa11.72□□□□□ -0.53
SSB-207ENST00000465871 GGA1Q9UJY5 639 aa11.72□□□□□ -0.53
SSB-207ENST00000465871 PHF20L1A8MW92 1017 aa11.71□□□□□ -0.53
SSB-207ENST00000465871 SHISA8B8ZZ34 492 aa11.71□□□□□ -0.53
SSB-207ENST00000465871 LMOD1P29536 600 aaPredicted RBP11.71□□□□□ -0.53
SSB-207ENST00000465871 PTK7Q13308 1070 aa11.71□□□□□ -0.53
SSB-207ENST00000465871 RHPN1Q8TCX5 695 aa11.71□□□□□ -0.53
SSB-207ENST00000465871 EDARADDQ8WWZ3 215 aa11.71□□□□□ -0.53
SSB-207ENST00000465871 CNTNAP5Q8WYK1 1306 aa11.7□□□□□ -0.54
SSB-207ENST00000465871 FAM196BA6NMK8 535 aa11.7□□□□□ -0.54
SSB-207ENST00000465871 USP17L15C9J2P7 530 aa11.7□□□□□ -0.54
SSB-207ENST00000465871 USP17L10C9JJH3 530 aa11.7□□□□□ -0.54
SSB-207ENST00000465871 USP17L13C9JLJ4 530 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms