RNA–Protein interactions for RNA: ENST00000465741.1

SPTA1-203, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-203ENST00000465741 ABCA5Q8WWZ7 1642 aa10.44□□□□□ -0.74
SPTA1-203ENST00000465741 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.44□□□□□ -0.74
SPTA1-203ENST00000465741 ZNF358Q9NW07 568 aa10.44□□□□□ -0.74
SPTA1-203ENST00000465741 PODXL2Q9NZ53 605 aa10.44□□□□□ -0.74
SPTA1-203ENST00000465741 FAM181BA6NEQ2 426 aa10.43□□□□□ -0.74
SPTA1-203ENST00000465741 ADH1AP07327 375 aa10.43□□□□□ -0.74
SPTA1-203ENST00000465741 ATP2B4P23634 1241 aa10.43□□□□□ -0.74
SPTA1-203ENST00000465741 ADD1P35611 737 aaKnown RBP10.43□□□□□ -0.74
SPTA1-203ENST00000465741 WDR4P57081 412 aaKnown RBP10.43□□□□□ -0.74
SPTA1-203ENST00000465741 HINFPQ9BQA5 517 aa10.43□□□□□ -0.74
SPTA1-203ENST00000465741 TMEM229AB2RXF0 380 aa10.42□□□□□ -0.74
SPTA1-203ENST00000465741 ZIC2O95409 532 aaPredicted RBP10.42□□□□□ -0.74
SPTA1-203ENST00000465741 INHAP05111 366 aa10.42□□□□□ -0.74
SPTA1-203ENST00000465741 SSFA2P28290 1259 aa10.42□□□□□ -0.74
SPTA1-203ENST00000465741 SCNN1DP51172 638 aa10.42□□□□□ -0.74
SPTA1-203ENST00000465741 KIF21BO75037 1637 aa10.42□□□□□ -0.74
SPTA1-203ENST00000465741 WDR97A6NE52 1622 aa10.41□□□□□ -0.74
SPTA1-203ENST00000465741 ITPKCQ96DU7 683 aa10.41□□□□□ -0.74
SPTA1-203ENST00000465741 ETNK1Q9HBU6 452 aa10.41□□□□□ -0.74
SPTA1-203ENST00000465741 CEP162Q5TB80 1403 aa10.41□□□□□ -0.74
SPTA1-203ENST00000465741 SOBPA7XYQ1 873 aa10.4□□□□□ -0.74
SPTA1-203ENST00000465741 Q6ZVU0 165 aa10.4□□□□□ -0.74
SPTA1-203ENST00000465741 TSEN2Q8NCE0 465 aaKnown RBP10.4□□□□□ -0.74
SPTA1-203ENST00000465741 CCER1Q8TC90 406 aaPredicted RBP10.4□□□□□ -0.74
SPTA1-203ENST00000465741 MTMR7Q9Y216 660 aa10.4□□□□□ -0.74
SPTA1-203ENST00000465741 MAGI1Q96QZ7 1491 aaPredicted RBP10.4□□□□□ -0.74
SPTA1-203ENST00000465741 EIF4G3O43432 1585 aaKnown RBP10.39□□□□□ -0.75
SPTA1-203ENST00000465741 PRMT3O60678 531 aa10.39□□□□□ -0.75
SPTA1-203ENST00000465741 TIMP2P16035 220 aa10.39□□□□□ -0.75
SPTA1-203ENST00000465741 C1orf216Q8TAB5 229 aa10.39□□□□□ -0.75
SPTA1-203ENST00000465741 KLF16Q9BXK1 252 aaPredicted RBP10.39□□□□□ -0.75
SPTA1-203ENST00000465741 ARHGEF10LQ9HCE6 1279 aa10.39□□□□□ -0.75
SPTA1-203ENST00000465741 CLIP1P30622 1438 aa10.39□□□□□ -0.75
SPTA1-203ENST00000465741 SYNJ2O15056 1496 aa10.38□□□□□ -0.75
SPTA1-203ENST00000465741 ARID4AP29374 1257 aaPredicted RBP10.38□□□□□ -0.75
SPTA1-203ENST00000465741 CBLBQ13191 982 aa10.38□□□□□ -0.75
SPTA1-203ENST00000465741 MRPL14Q6P1L8 145 aaKnown RBP10.38□□□□□ -0.75
SPTA1-203ENST00000465741 SLC4A9Q96Q91 983 aa10.38□□□□□ -0.75
SPTA1-203ENST00000465741 CXXC1Q9P0U4 656 aaPredicted RBP10.38□□□□□ -0.75
SPTA1-203ENST00000465741 SLAIN2Q9P270 581 aa10.38□□□□□ -0.75
SPTA1-203ENST00000465741 ZFAND3Q9H8U3 227 aa10.37□□□□□ -0.75
SPTA1-203ENST00000465741 RAB6BQ9NRW1 208 aa10.37□□□□□ -0.75
SPTA1-203ENST00000465741 SERTAD1Q9UHV2 236 aa10.37□□□□□ -0.75
SPTA1-203ENST00000465741 GNEQ9Y223 722 aaKnown RBP10.37□□□□□ -0.75
SPTA1-203ENST00000465741 IVNS1ABPQ9Y6Y0 642 aa10.37□□□□□ -0.75
SPTA1-203ENST00000465741 VSIG8P0DPA2 414 aa10.36□□□□□ -0.75
SPTA1-203ENST00000465741 WEE1P30291 646 aa10.36□□□□□ -0.75
SPTA1-203ENST00000465741 PTGIRP43119 386 aa10.36□□□□□ -0.75
SPTA1-203ENST00000465741 OCLNQ16625 522 aa10.36□□□□□ -0.75
SPTA1-203ENST00000465741 GAS2L2Q8NHY3 880 aa10.36□□□□□ -0.75
SPTA1-203ENST00000465741 XAGE2Q96GT9 111 aa10.36□□□□□ -0.75
SPTA1-203ENST00000465741 PRIMPOLQ96LW4 560 aa10.36□□□□□ -0.75
SPTA1-203ENST00000465741 PURBQ96QR8 312 aaKnown RBP10.36□□□□□ -0.75
SPTA1-203ENST00000465741 ESYT1Q9BSJ8 1104 aa10.36□□□□□ -0.75
SPTA1-203ENST00000465741 GRIN2AQ12879 1464 aa10.36□□□□□ -0.75
SPTA1-203ENST00000465741 STAU1O95793 577 aaKnown RBP10.35□□□□□ -0.75
SPTA1-203ENST00000465741 IGFBP4P22692 258 aa10.35□□□□□ -0.75
SPTA1-203ENST00000465741 SMTNP53814 917 aa10.35□□□□□ -0.75
SPTA1-203ENST00000465741 CLN3Q13286 438 aa10.35□□□□□ -0.75
SPTA1-203ENST00000465741 PHLDB3Q6NSJ2 640 aa10.35□□□□□ -0.75
SPTA1-203ENST00000465741 CNKSR1Q969H4 720 aa10.35□□□□□ -0.75
SPTA1-203ENST00000465741 NLRP3Q96P20 1036 aa10.35□□□□□ -0.75
SPTA1-203ENST00000465741 ADAMTS12P58397 1594 aa10.35□□□□□ -0.75
SPTA1-203ENST00000465741 CUL7Q14999 1698 aa10.34□□□□□ -0.75
SPTA1-203ENST00000465741 A0A1W2PRU2 124 aa10.34□□□□□ -0.75
SPTA1-203ENST00000465741 A6NJY4 79 aa10.34□□□□□ -0.75
SPTA1-203ENST00000465741 IL2RAP01589 272 aa10.34□□□□□ -0.75
SPTA1-203ENST00000465741 TLR1Q15399 786 aa10.34□□□□□ -0.75
SPTA1-203ENST00000465741 TXNDC2Q86VQ3 553 aa10.34□□□□□ -0.75
SPTA1-203ENST00000465741 TNS4Q8IZW8 715 aa10.34□□□□□ -0.75
SPTA1-203ENST00000465741 MEIOBQ8N635 442 aa10.34□□□□□ -0.75
SPTA1-203ENST00000465741 NBPF15Q8N660 670 aa10.34□□□□□ -0.75
SPTA1-203ENST00000465741 GZF1Q9H116 711 aaPredicted RBP10.34□□□□□ -0.75
SPTA1-203ENST00000465741 FOXO3O43524 673 aa10.33□□□□□ -0.76
SPTA1-203ENST00000465741 PTCD1O75127 700 aaKnown RBP10.33□□□□□ -0.76
SPTA1-203ENST00000465741 UPP2O95045 317 aa10.33□□□□□ -0.76
SPTA1-203ENST00000465741 EPHA4P54764 986 aa10.33□□□□□ -0.76
SPTA1-203ENST00000465741 RELBQ01201 579 aa10.33□□□□□ -0.76
SPTA1-203ENST00000465741 MTFR1Q15390 333 aa10.33□□□□□ -0.76
SPTA1-203ENST00000465741 TSEN34Q9BSV6 310 aaKnown RBP10.33□□□□□ -0.76
SPTA1-203ENST00000465741 CHMP3Q9Y3E7 222 aa10.33□□□□□ -0.76
SPTA1-203ENST00000465741 CHD1O14646 1710 aa10.33□□□□□ -0.76
SPTA1-203ENST00000465741 RIMBP3CA6NJZ7 1639 aa10.33□□□□□ -0.76
SPTA1-203ENST00000465741 RIMBP3BA6NNM3 1639 aa10.33□□□□□ -0.76
SPTA1-203ENST00000465741 RIMBP3Q9UFD9 1639 aa10.33□□□□□ -0.76
SPTA1-203ENST00000465741 MEN1O00255 615 aa10.32□□□□□ -0.76
SPTA1-203ENST00000465741 GSK3AP49840 483 aa10.32□□□□□ -0.76
SPTA1-203ENST00000465741 CYB5RLQ6IPT4 315 aa10.32□□□□□ -0.76
SPTA1-203ENST00000465741 TAS1R3Q7RTX0 852 aa10.32□□□□□ -0.76
SPTA1-203ENST00000465741 KDF1Q8NAX2 398 aaPredicted RBP10.32□□□□□ -0.76
SPTA1-203ENST00000465741 SCG3Q8WXD2 468 aaKnown RBP10.32□□□□□ -0.76
SPTA1-203ENST00000465741 AGBL1Q96MI9 1066 aa10.32□□□□□ -0.76
SPTA1-203ENST00000465741 CCDC9Q9Y3X0 531 aaKnown RBP10.32□□□□□ -0.76
SPTA1-203ENST00000465741 KIAA0586Q9BVV6 1533 aa10.32□□□□□ -0.76
SPTA1-203ENST00000465741 TTBK1Q5TCY1 1321 aaPredicted RBP10.32□□□□□ -0.76
SPTA1-203ENST00000465741 LGR5O75473 907 aa10.31□□□□□ -0.76
SPTA1-203ENST00000465741 GTF2E1P29083 439 aaPredicted RBP10.31□□□□□ -0.76
SPTA1-203ENST00000465741 VTI1AQ96AJ9 217 aa10.31□□□□□ -0.76
SPTA1-203ENST00000465741 TSPAN10Q9H1Z9 355 aaPredicted RBP10.31□□□□□ -0.76
SPTA1-203ENST00000465741 SCHIP1Q9P0W5 487 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms