RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 PGPEP1Q9NXJ5 209 aa3.62□□□□□ -1.83
NUCKS1-202ENST00000464938 KRBA1A5PL33 1030 aa3.61□□□□□ -1.83
NUCKS1-202ENST00000464938 CARNS1A5YM72 827 aa3.61□□□□□ -1.83
NUCKS1-202ENST00000464938 PHF20L1A8MW92 1017 aa3.61□□□□□ -1.83
NUCKS1-202ENST00000464938 BRD1O95696 1058 aa3.61□□□□□ -1.83
NUCKS1-202ENST00000464938 MYCP01106 439 aaPredicted RBP3.61□□□□□ -1.83
NUCKS1-202ENST00000464938 GNRH1P01148 92 aa3.61□□□□□ -1.83
NUCKS1-202ENST00000464938 SSFA2P28290 1259 aa3.61□□□□□ -1.83
NUCKS1-202ENST00000464938 EPHA4P54764 986 aa3.61□□□□□ -1.83
NUCKS1-202ENST00000464938 SEC13P55735 322 aa3.61□□□□□ -1.83
NUCKS1-202ENST00000464938 RAB15P59190 212 aa3.61□□□□□ -1.83
NUCKS1-202ENST00000464938 FOXD4L5Q5VV16 416 aaPredicted RBP3.61□□□□□ -1.83
NUCKS1-202ENST00000464938 C1orf216Q8TAB5 229 aa3.61□□□□□ -1.83
NUCKS1-202ENST00000464938 XAGE2Q96GT9 111 aa3.61□□□□□ -1.83
NUCKS1-202ENST00000464938 INSM2Q96T92 566 aaPredicted RBP3.61□□□□□ -1.83
NUCKS1-202ENST00000464938 KRTAP9-9Q9BYP9 154 aa3.61□□□□□ -1.83
NUCKS1-202ENST00000464938 KRTAP9-4Q9BYQ2 154 aa3.61□□□□□ -1.83
NUCKS1-202ENST00000464938 LRRC4BQ9NT99 713 aa3.61□□□□□ -1.83
NUCKS1-202ENST00000464938 SFI1A8K8P3 1242 aa3.6□□□□□ -1.83
NUCKS1-202ENST00000464938 INHAP05111 366 aa3.6□□□□□ -1.83
NUCKS1-202ENST00000464938 ADH1AP07327 375 aa3.6□□□□□ -1.83
NUCKS1-202ENST00000464938 BCRP11274 1271 aa3.6□□□□□ -1.83
NUCKS1-202ENST00000464938 WEE1P30291 646 aa3.6□□□□□ -1.83
NUCKS1-202ENST00000464938 MTFR1Q15390 333 aa3.6□□□□□ -1.83
NUCKS1-202ENST00000464938 OCLNQ16625 522 aa3.6□□□□□ -1.83
NUCKS1-202ENST00000464938 POTEAQ6S8J7 498 aa3.6□□□□□ -1.83
NUCKS1-202ENST00000464938 TAS1R3Q7RTX0 852 aa3.6□□□□□ -1.83
NUCKS1-202ENST00000464938 ZNF295-AS1Q8N0V1 137 aa3.6□□□□□ -1.83
NUCKS1-202ENST00000464938 BEND7Q8N7W2 519 aaPredicted RBP3.6□□□□□ -1.83
NUCKS1-202ENST00000464938 GALNT6Q8NCL4 622 aa3.6□□□□□ -1.83
NUCKS1-202ENST00000464938 TPCN2Q8NHX9 752 aa3.6□□□□□ -1.83
NUCKS1-202ENST00000464938 ACDQ96AP0 544 aa3.6□□□□□ -1.83
NUCKS1-202ENST00000464938 ZNF594Q96JF6 807 aaPredicted RBP3.6□□□□□ -1.83
NUCKS1-202ENST00000464938 AGBL1Q96MI9 1066 aa3.6□□□□□ -1.83
NUCKS1-202ENST00000464938 ETNK1Q9HBU6 452 aa3.6□□□□□ -1.83
NUCKS1-202ENST00000464938 ENAMQ9NRM1 1142 aa3.6□□□□□ -1.83
NUCKS1-202ENST00000464938 MBIPQ9NS73 344 aa3.6□□□□□ -1.83
NUCKS1-202ENST00000464938 ZNF358Q9NW07 568 aa3.6□□□□□ -1.83
NUCKS1-202ENST00000464938 IGF1RP08069 1367 aa3.6□□□□□ -1.83
NUCKS1-202ENST00000464938 IL2RAP01589 272 aa3.59□□□□□ -1.83
NUCKS1-202ENST00000464938 COL8A1P27658 744 aa3.59□□□□□ -1.83
NUCKS1-202ENST00000464938 PTGIRP43119 386 aa3.59□□□□□ -1.83
NUCKS1-202ENST00000464938 GDF10P55107 478 aa3.59□□□□□ -1.83
NUCKS1-202ENST00000464938 KCNA1Q09470 495 aa3.59□□□□□ -1.83
NUCKS1-202ENST00000464938 TRIM26Q12899 539 aaPredicted RBP3.59□□□□□ -1.83
NUCKS1-202ENST00000464938 CYP2U1Q7Z449 544 aa3.59□□□□□ -1.83
NUCKS1-202ENST00000464938 TXNDC2Q86VQ3 553 aa3.59□□□□□ -1.83
NUCKS1-202ENST00000464938 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.59□□□□□ -1.83
NUCKS1-202ENST00000464938 ZNF837Q96EG3 531 aaPredicted RBP3.59□□□□□ -1.83
NUCKS1-202ENST00000464938 FHDC1Q9C0D6 1143 aaPredicted RBP3.59□□□□□ -1.83
NUCKS1-202ENST00000464938 GNEQ9Y223 722 aaKnown RBP3.59□□□□□ -1.83
NUCKS1-202ENST00000464938 A0A1W2PRU2 124 aa3.58□□□□□ -1.84
NUCKS1-202ENST00000464938 BACH1O14867 736 aa3.58□□□□□ -1.84
NUCKS1-202ENST00000464938 C21orf2O43822 256 aa3.58□□□□□ -1.84
NUCKS1-202ENST00000464938 STAU1O95793 577 aaKnown RBP3.58□□□□□ -1.84
NUCKS1-202ENST00000464938 FURINP09958 794 aa3.58□□□□□ -1.84
NUCKS1-202ENST00000464938 HOXB4P17483 251 aaPredicted RBP3.58□□□□□ -1.84
NUCKS1-202ENST00000464938 SNRPNP63162 240 aaKnown RBP3.58□□□□□ -1.84
NUCKS1-202ENST00000464938 CLN3Q13286 438 aa3.58□□□□□ -1.84
NUCKS1-202ENST00000464938 STAG2Q8N3U4 1231 aa3.58□□□□□ -1.84
NUCKS1-202ENST00000464938 TSEN2Q8NCE0 465 aaKnown RBP3.58□□□□□ -1.84
NUCKS1-202ENST00000464938 GAS2L2Q8NHY3 880 aa3.58□□□□□ -1.84
NUCKS1-202ENST00000464938 ESYT1Q9BSJ8 1104 aa3.58□□□□□ -1.84
NUCKS1-202ENST00000464938 SCHIP1Q9P0W5 487 aaPredicted RBP3.58□□□□□ -1.84
NUCKS1-202ENST00000464938 IQSEC3Q9UPP2 1182 aaPredicted RBP3.58□□□□□ -1.84
NUCKS1-202ENST00000464938 KRTAP4-8A0A0G2JLE6 195 aa3.57□□□□□ -1.84
NUCKS1-202ENST00000464938 CDK2AP1O14519 115 aa3.57□□□□□ -1.84
NUCKS1-202ENST00000464938 IGFBP4P22692 258 aa3.57□□□□□ -1.84
NUCKS1-202ENST00000464938 ATP2B4P23634 1241 aa3.57□□□□□ -1.84
NUCKS1-202ENST00000464938 SMTNP53814 917 aa3.57□□□□□ -1.84
NUCKS1-202ENST00000464938 PSME1Q06323 249 aa3.57□□□□□ -1.84
NUCKS1-202ENST00000464938 ESCO1Q5FWF5 840 aa3.57□□□□□ -1.84
NUCKS1-202ENST00000464938 B4GALNT3Q6L9W6 998 aa3.57□□□□□ -1.84
NUCKS1-202ENST00000464938 KRTAP19-1Q8IUB9 90 aa3.57□□□□□ -1.84
NUCKS1-202ENST00000464938 TRIM22Q8IYM9 498 aa3.57□□□□□ -1.84
NUCKS1-202ENST00000464938 TNS4Q8IZW8 715 aa3.57□□□□□ -1.84
NUCKS1-202ENST00000464938 COL26A1Q96A83 441 aa3.57□□□□□ -1.84
NUCKS1-202ENST00000464938 GMCL1Q96IK5 515 aa3.57□□□□□ -1.84
NUCKS1-202ENST00000464938 GRIP2Q9C0E4 1043 aa3.57□□□□□ -1.84
NUCKS1-202ENST00000464938 ESF1Q9H501 851 aaKnown RBP3.57□□□□□ -1.84
NUCKS1-202ENST00000464938 CXXC1Q9P0U4 656 aaPredicted RBP3.57□□□□□ -1.84
NUCKS1-202ENST00000464938 A6NJY4 79 aa3.56□□□□□ -1.84
NUCKS1-202ENST00000464938 PATL2C9JE40 543 aaKnown RBP3.56□□□□□ -1.84
NUCKS1-202ENST00000464938 GPR25O00155 361 aa3.56□□□□□ -1.84
NUCKS1-202ENST00000464938 OIP5O43482 229 aa3.56□□□□□ -1.84
NUCKS1-202ENST00000464938 GPC1P35052 558 aa3.56□□□□□ -1.84
NUCKS1-202ENST00000464938 RNF144AP50876 292 aaPredicted RBP3.56□□□□□ -1.84
NUCKS1-202ENST00000464938 RELBQ01201 579 aa3.56□□□□□ -1.84
NUCKS1-202ENST00000464938 CENPCQ03188 943 aa3.56□□□□□ -1.84
NUCKS1-202ENST00000464938 DBN1Q16643 649 aa3.56□□□□□ -1.84
NUCKS1-202ENST00000464938 PODNQ7Z5L7 613 aa3.56□□□□□ -1.84
NUCKS1-202ENST00000464938 ALYREFQ86V81 257 aaKnown RBP3.56□□□□□ -1.84
NUCKS1-202ENST00000464938 CNKSR1Q969H4 720 aa3.56□□□□□ -1.84
NUCKS1-202ENST00000464938 PRIMPOLQ96LW4 560 aa3.56□□□□□ -1.84
NUCKS1-202ENST00000464938 ZNF395Q9H8N7 513 aaPredicted RBP3.56□□□□□ -1.84
NUCKS1-202ENST00000464938 ARHGEF10LQ9HCE6 1279 aa3.56□□□□□ -1.84
NUCKS1-202ENST00000464938 RBM19Q9Y4C8 960 aaKnown RBP3.56□□□□□ -1.84
NUCKS1-202ENST00000464938 ATAD2Q6PL18 1390 aa3.55□□□□□ -1.84
NUCKS1-202ENST00000464938 SHISA8B8ZZ34 492 aa3.55□□□□□ -1.84
NUCKS1-202ENST00000464938 ARID4AP29374 1257 aaPredicted RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms