RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 NUDCQ9Y266 331 aa12.3□□□□□ -0.44
BRCA1-207ENST00000461798 ADAMTS7Q9UKP4 1686 aa12.29□□□□□ -0.44
BRCA1-207ENST00000461798 SCN11AQ9UI33 1791 aa12.29□□□□□ -0.44
BRCA1-207ENST00000461798 GNAT3A8MTJ3 354 aa12.29□□□□□ -0.44
BRCA1-207ENST00000461798 CYP19A1P11511 503 aaPredicted RBP12.29□□□□□ -0.44
BRCA1-207ENST00000461798 SLC39A6Q13433 755 aa12.29□□□□□ -0.44
BRCA1-207ENST00000461798 DNAJC10Q8IXB1 793 aa12.29□□□□□ -0.44
BRCA1-207ENST00000461798 PHACTR3Q96KR7 559 aa12.29□□□□□ -0.44
BRCA1-207ENST00000461798 RSPH6AQ9H0K4 717 aa12.29□□□□□ -0.44
BRCA1-207ENST00000461798 FCHSD2O94868 740 aa12.28□□□□□ -0.44
BRCA1-207ENST00000461798 TGFB2P61812 414 aa12.28□□□□□ -0.44
BRCA1-207ENST00000461798 CCDC87Q9NVE4 849 aa12.28□□□□□ -0.44
BRCA1-207ENST00000461798 CICQ96RK0 1608 aaPredicted RBP12.28□□□□□ -0.44
BRCA1-207ENST00000461798 COL5A3P25940 1745 aaPredicted RBP12.28□□□□□ -0.44
BRCA1-207ENST00000461798 MKRN4PQ13434 485 aaPredicted RBP12.27□□□□□ -0.45
BRCA1-207ENST00000461798 USP42Q9H9J4 1324 aaKnown RBP12.27□□□□□ -0.45
BRCA1-207ENST00000461798 MYH14Q7Z406 1995 aaKnown RBP12.27□□□□□ -0.45
BRCA1-207ENST00000461798 UTRNP46939 3433 aa12.26□□□□□ -0.45
BRCA1-207ENST00000461798 PRKAR2BP31323 418 aa12.26□□□□□ -0.45
BRCA1-207ENST00000461798 TEFQ10587 303 aa12.26□□□□□ -0.45
BRCA1-207ENST00000461798 PARP3Q9Y6F1 533 aa12.26□□□□□ -0.45
BRCA1-207ENST00000461798 CHD4Q14839 1912 aa12.26□□□□□ -0.45
BRCA1-207ENST00000461798 SOS1Q07889 1333 aaPredicted RBP12.26□□□□□ -0.45
BRCA1-207ENST00000461798 CEMIPQ8WUJ3 1361 aa12.26□□□□□ -0.45
BRCA1-207ENST00000461798 KCPQ6ZWJ8 1503 aa12.26□□□□□ -0.45
BRCA1-207ENST00000461798 U2AF1L5P0DN76 240 aaPredicted RBP12.25□□□□□ -0.45
BRCA1-207ENST00000461798 TM4SF1P30408 202 aa12.25□□□□□ -0.45
BRCA1-207ENST00000461798 U2AF1Q01081 240 aaKnown RBP eCLIP12.25□□□□□ -0.45
BRCA1-207ENST00000461798 FKBP8Q14318 412 aa12.25□□□□□ -0.45
BRCA1-207ENST00000461798 ZNF790Q6PG37 636 aa12.25□□□□□ -0.45
BRCA1-207ENST00000461798 TEX13AQ9BXU3 409 aaPredicted RBP12.25□□□□□ -0.45
BRCA1-207ENST00000461798 SRP68Q9UHB9 627 aaKnown RBP12.25□□□□□ -0.45
BRCA1-207ENST00000461798 HTATSF1O43719 755 aaKnown RBP12.24□□□□□ -0.45
BRCA1-207ENST00000461798 STARD3NLO95772 234 aa12.24□□□□□ -0.45
BRCA1-207ENST00000461798 CD44P16070 742 aaKnown RBP12.24□□□□□ -0.45
BRCA1-207ENST00000461798 TJP1Q07157 1748 aa12.24□□□□□ -0.45
BRCA1-207ENST00000461798 C10orf71Q711Q0 1435 aa12.24□□□□□ -0.45
BRCA1-207ENST00000461798 TTC5Q8N0Z6 440 aa12.24□□□□□ -0.45
BRCA1-207ENST00000461798 ZNF496Q96IT1 587 aaPredicted RBP12.24□□□□□ -0.45
BRCA1-207ENST00000461798 NARFQ9UHQ1 456 aa12.24□□□□□ -0.45
BRCA1-207ENST00000461798 ZPR1O75312 459 aa12.23□□□□□ -0.45
BRCA1-207ENST00000461798 DDR1Q08345 913 aa12.23□□□□□ -0.45
BRCA1-207ENST00000461798 ZBTB1Q9Y2K1 713 aa12.23□□□□□ -0.45
BRCA1-207ENST00000461798 PXDNLA1KZ92 1463 aa12.22□□□□□ -0.45
BRCA1-207ENST00000461798 HEG1Q9ULI3 1381 aa12.22□□□□□ -0.45
BRCA1-207ENST00000461798 A0A0G2JLW4 131 aa12.22□□□□□ -0.45
BRCA1-207ENST00000461798 EIF5P55010 431 aaKnown RBP12.22□□□□□ -0.45
BRCA1-207ENST00000461798 USPL1Q5W0Q7 1092 aa12.22□□□□□ -0.45
BRCA1-207ENST00000461798 FMNL2Q96PY5 1086 aa12.22□□□□□ -0.45
BRCA1-207ENST00000461798 A0A087WZG4 1122 aa12.21□□□□□ -0.45
BRCA1-207ENST00000461798 BTBD11A6QL63 1104 aa12.21□□□□□ -0.45
BRCA1-207ENST00000461798 POLRMTO00411 1230 aaKnown RBP12.21□□□□□ -0.45
BRCA1-207ENST00000461798 ATXN8OSP0DMR3 200 aa12.21□□□□□ -0.45
BRCA1-207ENST00000461798 DPEP1P16444 411 aa12.21□□□□□ -0.45
BRCA1-207ENST00000461798 KCNA3P22001 575 aa12.21□□□□□ -0.45
BRCA1-207ENST00000461798 BCL2L12Q9HB09 334 aa12.21□□□□□ -0.45
BRCA1-207ENST00000461798 C4AP0C0L4 1744 aa12.2□□□□□ -0.46
BRCA1-207ENST00000461798 COL15A1P39059 1388 aa12.2□□□□□ -0.46
BRCA1-207ENST00000461798 PRR29P0C7W0 189 aa12.2□□□□□ -0.46
BRCA1-207ENST00000461798 CANXP27824 592 aaKnown RBP12.2□□□□□ -0.46
BRCA1-207ENST00000461798 IL6STP40189 918 aaPredicted RBP12.2□□□□□ -0.46
BRCA1-207ENST00000461798 RTF1Q92541 710 aaKnown RBP12.2□□□□□ -0.46
BRCA1-207ENST00000461798 KIF13BQ9NQT8 1826 aa12.2□□□□□ -0.46
BRCA1-207ENST00000461798 ZBTB22O15209 634 aa12.19□□□□□ -0.46
BRCA1-207ENST00000461798 KCNQ3O43525 872 aa12.19□□□□□ -0.46
BRCA1-207ENST00000461798 NFIXQ14938 502 aa12.19□□□□□ -0.46
BRCA1-207ENST00000461798 UBR2Q8IWV8 1755 aa12.19□□□□□ -0.46
BRCA1-207ENST00000461798 ADCY9O60503 1353 aa12.18□□□□□ -0.46
BRCA1-207ENST00000461798 C1QTNF8P60827 252 aa12.18□□□□□ -0.46
BRCA1-207ENST00000461798 RALBP1Q15311 655 aa12.18□□□□□ -0.46
BRCA1-207ENST00000461798 TAF7Q15545 349 aaPredicted RBP12.18□□□□□ -0.46
BRCA1-207ENST00000461798 MCM10Q7L590 875 aa12.18□□□□□ -0.46
BRCA1-207ENST00000461798 PLEKHF1Q96S99 279 aa12.18□□□□□ -0.46
BRCA1-207ENST00000461798 PIM2Q9P1W9 311 aa12.18□□□□□ -0.46
BRCA1-207ENST00000461798 WWC3Q9ULE0 1092 aa12.18□□□□□ -0.46
BRCA1-207ENST00000461798 BCS1LQ9Y276 419 aa12.18□□□□□ -0.46
BRCA1-207ENST00000461798 A1BGP04217 495 aa12.17□□□□□ -0.46
BRCA1-207ENST00000461798 SERPINB2P05120 415 aa12.17□□□□□ -0.46
BRCA1-207ENST00000461798 SNRPA1P09661 255 aaKnown RBP12.17□□□□□ -0.46
BRCA1-207ENST00000461798 PNNQ9H307 717 aaKnown RBP12.17□□□□□ -0.46
BRCA1-207ENST00000461798 GOLGB1Q14789 3259 aaKnown RBP12.17□□□□□ -0.46
BRCA1-207ENST00000461798 ATP10DQ9P241 1426 aa12.17□□□□□ -0.46
BRCA1-207ENST00000461798 KIAA1551Q9HCM1 1747 aa12.17□□□□□ -0.46
BRCA1-207ENST00000461798 SIPA1L3O60292 1781 aaPredicted RBP12.16□□□□□ -0.46
BRCA1-207ENST00000461798 GIGYF1O75420 1035 aaPredicted RBP12.16□□□□□ -0.46
BRCA1-207ENST00000461798 NEFMP07197 916 aa12.16□□□□□ -0.46
BRCA1-207ENST00000461798 DCTN1Q14203 1278 aa12.16□□□□□ -0.46
BRCA1-207ENST00000461798 DALRD3Q5D0E6 543 aaKnown RBP12.16□□□□□ -0.46
BRCA1-207ENST00000461798 USP16Q9Y5T5 823 aa12.16□□□□□ -0.46
BRCA1-207ENST00000461798 VIRMAQ69YN4 1812 aaKnown RBP12.16□□□□□ -0.46
BRCA1-207ENST00000461798 CLCN6P51797 869 aa12.15□□□□□ -0.46
BRCA1-207ENST00000461798 NFE2L2Q16236 605 aa12.15□□□□□ -0.46
BRCA1-207ENST00000461798 ARHGAP27Q6ZUM4 889 aa12.15□□□□□ -0.46
BRCA1-207ENST00000461798 TBC1D2BQ9UPU7 963 aa12.15□□□□□ -0.46
BRCA1-207ENST00000461798 RGL2O15211 777 aa12.14□□□□□ -0.47
BRCA1-207ENST00000461798 CAMTA2O94983 1202 aa12.14□□□□□ -0.47
BRCA1-207ENST00000461798 CHRNA5P30532 468 aa12.14□□□□□ -0.47
BRCA1-207ENST00000461798 PNISRQ8TF01 805 aaKnown RBP12.14□□□□□ -0.47
BRCA1-207ENST00000461798 GPBP1L1Q9HC44 474 aaPredicted RBP12.14□□□□□ -0.47
BRCA1-207ENST00000461798 PRAMEF22A3QJZ6 481 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms