RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 SLC52A2Q9HAB3 445 aa13.66□□□□□ -0.22
IFT88-204ENST00000461115 GLI3P10071 1580 aa13.66□□□□□ -0.22
IFT88-204ENST00000461115 GIGYF1O75420 1035 aaPredicted RBP13.65□□□□□ -0.22
IFT88-204ENST00000461115 DCAF5Q96JK2 942 aa13.65□□□□□ -0.22
IFT88-204ENST00000461115 TSPYL2Q9H2G4 693 aaPredicted RBP13.65□□□□□ -0.22
IFT88-204ENST00000461115 PRDM11Q9NQV5 511 aa13.65□□□□□ -0.22
IFT88-204ENST00000461115 UBR2Q8IWV8 1755 aa13.65□□□□□ -0.22
IFT88-204ENST00000461115 PAPPAQ13219 1627 aa13.65□□□□□ -0.22
IFT88-204ENST00000461115 CYP27B1O15528 508 aa13.64□□□□□ -0.23
IFT88-204ENST00000461115 KCNQ3O43525 872 aa13.64□□□□□ -0.23
IFT88-204ENST00000461115 NKX1-1Q15270 411 aaPredicted RBP13.64□□□□□ -0.23
IFT88-204ENST00000461115 CEP85Q6P2H3 762 aa13.64□□□□□ -0.23
IFT88-204ENST00000461115 C5P01031 1676 aa13.64□□□□□ -0.23
IFT88-204ENST00000461115 PLCH1Q4KWH8 1693 aa13.64□□□□□ -0.23
IFT88-204ENST00000461115 LAMB4A4D0S4 1761 aa13.64□□□□□ -0.23
IFT88-204ENST00000461115 ANP32AP39687 249 aaKnown RBP13.64□□□□□ -0.23
IFT88-204ENST00000461115 CHD1LQ86WJ1 897 aa13.64□□□□□ -0.23
IFT88-204ENST00000461115 IPO9Q96P70 1041 aaKnown RBP13.64□□□□□ -0.23
IFT88-204ENST00000461115 COL16A1Q07092 1604 aaPredicted RBP13.63□□□□□ -0.23
IFT88-204ENST00000461115 CSB-PGBD3P0DP91 1061 aa13.63□□□□□ -0.23
IFT88-204ENST00000461115 MEIS3Q99687 375 aa13.63□□□□□ -0.23
IFT88-204ENST00000461115 DBF4Q9UBU7 674 aaPredicted RBP13.63□□□□□ -0.23
IFT88-204ENST00000461115 GNAI3P08754 354 aa13.62□□□□□ -0.23
IFT88-204ENST00000461115 FKBP5Q13451 457 aaPredicted RBP13.62□□□□□ -0.23
IFT88-204ENST00000461115 ZNF790Q6PG37 636 aa13.62□□□□□ -0.23
IFT88-204ENST00000461115 C1orf115Q9H7X2 142 aa13.62□□□□□ -0.23
IFT88-204ENST00000461115 WNK3Q9BYP7 1800 aa13.61□□□□□ -0.23
IFT88-204ENST00000461115 PCDH11XQ9BZA7 1347 aa13.61□□□□□ -0.23
IFT88-204ENST00000461115 PCDH11YQ9BZA8 1340 aa13.61□□□□□ -0.23
IFT88-204ENST00000461115 F6X3S4 739 aa13.61□□□□□ -0.23
IFT88-204ENST00000461115 PHF12Q96QT6 1004 aa13.61□□□□□ -0.23
IFT88-204ENST00000461115 DISP2A7MBM2 1401 aa13.6□□□□□ -0.23
IFT88-204ENST00000461115 PHAXQ9H814 394 aaKnown RBP13.6□□□□□ -0.23
IFT88-204ENST00000461115 CHPF2Q9P2E5 772 aa13.6□□□□□ -0.23
IFT88-204ENST00000461115 ERVV-2B6SEH9 535 aa13.59□□□□□ -0.23
IFT88-204ENST00000461115 GNAI2P04899 355 aa13.59□□□□□ -0.23
IFT88-204ENST00000461115 IL2RBP14784 551 aa13.59□□□□□ -0.23
IFT88-204ENST00000461115 ZCRB1Q8TBF4 217 aaKnown RBP13.59□□□□□ -0.23
IFT88-204ENST00000461115 USP44Q9H0E7 712 aa13.59□□□□□ -0.23
IFT88-204ENST00000461115 DDX21Q9NR30 783 aaKnown RBP eCLIP13.59□□□□□ -0.23
IFT88-204ENST00000461115 HYPKQ9NX55 129 aa13.59□□□□□ -0.23
IFT88-204ENST00000461115 ADCY9O60503 1353 aa13.59□□□□□ -0.23
IFT88-204ENST00000461115 LRP6O75581 1613 aa13.58□□□□□ -0.23
IFT88-204ENST00000461115 ATP8B2P98198 1209 aa13.58□□□□□ -0.24
IFT88-204ENST00000461115 PDIA6Q15084 440 aa13.58□□□□□ -0.24
IFT88-204ENST00000461115 BMP2KLQ5H9B9 411 aa13.58□□□□□ -0.24
IFT88-204ENST00000461115 BEND3Q5T5X7 828 aa13.58□□□□□ -0.24
IFT88-204ENST00000461115 TOM1L2Q6ZVM7 507 aa13.58□□□□□ -0.24
IFT88-204ENST00000461115 TNS2Q63HR2 1409 aa13.58□□□□□ -0.24
IFT88-204ENST00000461115 TOGARAM1Q9Y4F4 1720 aa13.58□□□□□ -0.24
IFT88-204ENST00000461115 HMMRO75330 724 aa13.57□□□□□ -0.24
IFT88-204ENST00000461115 NFATC2IPQ8NCF5 419 aa13.57□□□□□ -0.24
IFT88-204ENST00000461115 DNAAF4Q8WXU2 420 aa13.57□□□□□ -0.24
IFT88-204ENST00000461115 TUBGCP6Q96RT7 1819 aa13.57□□□□□ -0.24
IFT88-204ENST00000461115 PHLPP1O60346 1717 aa13.57□□□□□ -0.24
IFT88-204ENST00000461115 NRAPQ86VF7 1730 aa13.57□□□□□ -0.24
IFT88-204ENST00000461115 ALDH1L1O75891 902 aa13.56□□□□□ -0.24
IFT88-204ENST00000461115 SLC4A10Q6U841 1118 aa13.56□□□□□ -0.24
IFT88-204ENST00000461115 KSR2Q6VAB6 950 aa13.56□□□□□ -0.24
IFT88-204ENST00000461115 LRP10Q7Z4F1 713 aa13.56□□□□□ -0.24
IFT88-204ENST00000461115 LNPKQ9C0E8 428 aa13.56□□□□□ -0.24
IFT88-204ENST00000461115 SRCIN1Q9C0H9 1055 aa13.56□□□□□ -0.24
IFT88-204ENST00000461115 ERBB4Q15303 1308 aa13.56□□□□□ -0.24
IFT88-204ENST00000461115 EIF2S2P20042 333 aaKnown RBP13.56□□□□□ -0.24
IFT88-204ENST00000461115 ANKRD45Q5TZF3 282 aa13.56□□□□□ -0.24
IFT88-204ENST00000461115 LARP1Q6PKG0 1096 aaKnown RBP13.56□□□□□ -0.24
IFT88-204ENST00000461115 SSH3Q8TE77 659 aa13.56□□□□□ -0.24
IFT88-204ENST00000461115 NECTIN2Q92692 538 aa13.56□□□□□ -0.24
IFT88-204ENST00000461115 DDRGK1Q96HY6 314 aa13.56□□□□□ -0.24
IFT88-204ENST00000461115 KCPQ6ZWJ8 1503 aa13.55□□□□□ -0.24
IFT88-204ENST00000461115 ITGB4P16144 1822 aa13.55□□□□□ -0.24
IFT88-204ENST00000461115 UTYO14607 1347 aa13.55□□□□□ -0.24
IFT88-204ENST00000461115 NWD2Q9ULI1 1742 aa13.55□□□□□ -0.24
IFT88-204ENST00000461115 PI4KAP2A4QPH2 592 aa13.55□□□□□ -0.24
IFT88-204ENST00000461115 GALR2O43603 387 aaPredicted RBP13.55□□□□□ -0.24
IFT88-204ENST00000461115 SNRPA1P09661 255 aaKnown RBP13.55□□□□□ -0.24
IFT88-204ENST00000461115 MTX1Q13505 466 aa13.55□□□□□ -0.24
IFT88-204ENST00000461115 PI4KAP1Q8N8J0 262 aa13.55□□□□□ -0.24
IFT88-204ENST00000461115 ZNF496Q96IT1 587 aaPredicted RBP13.55□□□□□ -0.24
IFT88-204ENST00000461115 SEC24BO95487 1268 aa13.54□□□□□ -0.24
IFT88-204ENST00000461115 PROSER3Q2NL68 480 aa13.54□□□□□ -0.24
IFT88-204ENST00000461115 PLEKHM2Q8IWE5 1019 aa13.54□□□□□ -0.24
IFT88-204ENST00000461115 FMNL2Q96PY5 1086 aa13.54□□□□□ -0.24
IFT88-204ENST00000461115 OSBPL3Q9H4L5 887 aa13.54□□□□□ -0.24
IFT88-204ENST00000461115 PRAMEF22A3QJZ6 481 aa13.53□□□□□ -0.24
IFT88-204ENST00000461115 CABP4P57796 275 aa13.53□□□□□ -0.24
IFT88-204ENST00000461115 SLC39A6Q13433 755 aa13.53□□□□□ -0.24
IFT88-204ENST00000461115 NOP58Q9Y2X3 529 aaKnown RBP13.53□□□□□ -0.24
IFT88-204ENST00000461115 SALL3Q9BXA9 1300 aa13.53□□□□□ -0.24
IFT88-204ENST00000461115 ARFGEF2Q9Y6D5 1785 aa13.52□□□□□ -0.24
IFT88-204ENST00000461115 UBTFL1P0CB47 393 aaPredicted RBP13.52□□□□□ -0.25
IFT88-204ENST00000461115 LINS1Q8NG48 757 aa13.52□□□□□ -0.25
IFT88-204ENST00000461115 TBC1D32Q96NH3 1257 aa13.52□□□□□ -0.25
IFT88-204ENST00000461115 COL15A1P39059 1388 aa13.52□□□□□ -0.25
IFT88-204ENST00000461115 NUP188Q5SRE5 1749 aa13.51□□□□□ -0.25
IFT88-204ENST00000461115 DDX58O95786 925 aaKnown RBP13.51□□□□□ -0.25
IFT88-204ENST00000461115 EVA1CP58658 441 aa13.51□□□□□ -0.25
IFT88-204ENST00000461115 TTC5Q8N0Z6 440 aa13.51□□□□□ -0.25
IFT88-204ENST00000461115 BTG4Q9NY30 223 aa13.51□□□□□ -0.25
IFT88-204ENST00000461115 HDAC5Q9UQL6 1122 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms